Nocardia seriolae: NS506_06235
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Entry
NS506_06235 CDS
T04599
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nsr
Nocardia seriolae
Pathway
nsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NS506_06235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsr03019
]
NS506_06235
03016 Transfer RNA biogenesis [BR:
nsr03016
]
NS506_06235
Enzymes [BR:
nsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NS506_06235
Messenger RNA biogenesis [BR:
nsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NS506_06235
Transfer RNA biogenesis [BR:
nsr03016
]
Prokaryotic type
tRNA degradation factors
NS506_06235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
S1_RRP5
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
APB00271
UniProt:
A0ABC8B195
LinkDB
All DBs
Position
complement(6532456..6534717)
Genome browser
AA seq
753 aa
AA seq
DB search
MSDTQTSSAAEVEPGVFESVALIDNGSYGTRTIRFETGRLAKQAAGSVVAYLDDETMLLS
ATTASKQPKDQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPS
FVDGLRNEIQVVVTVMSLDPKDLYDVVAINAASASTQIAGLPFSGPVGGVRVALIEGQWV
AFPTVEQLEGAVFDMVVAGRVVDGDVAIMMVEAEATDKVLALIADGATAPTETVVAEGLE
AAKPFIARLCKAQADLAALAAKPTEEFPIFLPYQADAFEAVEGTSKRELKEALSIADKQE
REAKIDEIKLAVLSELAESFAGREKEIGAAFRSVTKKLVRQRILTDSFRIDGRGLADIRA
LSAEVAVVPRAHGSALFERGETQILGVTTLDMVKMAQQVDSLGPETSKRYMHHYNFPPFS
TGETGRVGSPKRREIGHGALAERALVPVLPSQEEFPYAIRQVSEALGSNGSTSMGSVCAS
TLSLLNAGVPLKAPVAGIAMGLVSDTVKNDKGEDEVRYVALTDILGAEDAFGDMDFKVAG
TREFVTALQLDTKLDGIPSQVLAGALNQAKDARYTILDVMAEAINTPDEMSPYAPRVTAI
KIPVDKIGEVIGPKGKVINQITEDTGANISIEDDGTVFVGATDGPSAQAAIDAINAIANP
QLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGNGKRVAKVEDVVNVGDKIRVE
IADIDNRGKISLVPIDEDSDNSEASAAVEANAE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacacccagaccagttccgccgccgaggtcgagcccggcgttttcgagtccgtc
gccctgatcgacaacggcagctacggaactcgcaccatccgcttcgagaccggccgtctg
gccaagcaggccgcgggttccgtggtcgcctacctcgatgacgagaccatgctgctgtcg
gcgaccaccgcctccaagcagcccaaggaccagttcgacttcttcccgctgacggtggac
gtcgaggagcgcatgtacgccgcgggtcgcatccccggctcgttcttccgtcgcgagggc
cgtccctccaccgacgcgatcctgacctgccgcctgatcgaccggccgctgcgcccgtcc
ttcgtcgacggcctgcgcaacgagatccaggtcgtggtgaccgtcatgtcgctggatccc
aaggatctctacgacgtggtcgcgatcaacgccgcctcggcgtccacccagatcgcgggc
ctgccgttctccggtccggtcggcggcgtgcgcgtcgcgctgatcgagggccagtgggtc
gcgttcccgaccgtcgagcagctcgagggcgccgtcttcgacatggtcgtcgcgggccgc
gtggtcgacggtgacgtcgccatcatgatggtcgaggccgaggccaccgacaaggtgctc
gccctgatcgccgacggcgccaccgcgccgacggaaaccgttgtggccgagggcctcgag
gccgccaagccgttcatcgcgcggctgtgcaaggcgcaggccgacctggctgccctggcc
gccaagccgaccgaagagttcccgatcttcctgccgtaccaggccgacgccttcgaggcg
gtcgagggcacctcgaagcgtgagctgaaagaggcgctgtccatcgcggacaagcaggag
cgcgaggccaagatcgacgagatcaagctcgccgtgctctccgagctggccgagtccttc
gccggtcgcgagaaggagatcggcgcggcgttccgctcggtcaccaagaagctggtgcgc
cagcgcatcctgaccgacagcttccgcatcgacggccgtggcctggccgacatccgcgcc
ctgtccgccgaggtcgcggtggttccccgcgcccacggttcggcgctgttcgagcgtggc
gagacccagatcctgggcgtcaccaccctcgacatggtgaagatggcgcagcaggtcgac
tcgctcggcccggagacctccaagcgctacatgcaccactacaacttcccgccgttctcc
accggtgagaccggtcgcgtgggctcgcccaagcgccgcgagatcggccacggcgcgctc
gccgagcgtgcgctggtgcccgtcctgccgtcgcaggaggagttcccctacgccatccgt
caggtgtcggaggcgctgggctccaacggttccacctcgatgggttccgtgtgcgcctcg
accctgtcgctgctgaacgccggtgtgccgctcaaggcccccgtcgccggtatcgccatg
ggcctggtgtcggacaccgtgaagaacgacaagggtgaggacgaggtccgctacgtggcc
ctcaccgacatcctgggcgccgaggatgccttcggcgacatggacttcaaggtcgccggt
acccgcgagttcgtcaccgcgctgcagctggacaccaagctcgacggcatcccgtcgcag
gtgctggccggtgcgctgaaccaggccaaggacgcgcgctacaccatcctggatgtcatg
gccgaggccatcaacaccccggacgagatgagcccctacgctccgcgcgtcacggccatc
aagatcccggtggacaagatcggcgaggtgatcgggcccaagggcaaggtcatcaaccag
atcaccgaggacaccggcgccaacatctccatcgaggatgacggcaccgtgttcgtcggc
gcgaccgacggcccgtcggcgcaggccgcgatcgacgcgatcaacgccatcgccaacccg
cagctgccgaaggtcggcgagcgcttcctgggcacggtcgtcaagaccaccgccttcggc
gcgttcgtctcgctgctgccgggccgcgacggtctggtccacatctcgaagctgggcaac
ggcaagcgcgtcgccaaggtcgaggatgtggtcaacgtgggcgacaagatccgcgtcgag
atcgccgacatcgacaaccgcggcaagatctcgctggtgccgatcgacgaggattcggac
aactccgaagcctcggctgcggtcgaggccaacgcagagtaa
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