Nocardia seriolae: NS506_06243
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Entry
NS506_06243 CDS
T04599
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nsr
Nocardia seriolae
Brite
KEGG Orthology (KO) [BR:
nsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsr03016
]
NS506_06243 (truB)
Enzymes [BR:
nsr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NS506_06243 (truB)
Transfer RNA biogenesis [BR:
nsr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NS506_06243 (truB)
Prokaryotic type
NS506_06243 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DUF2244
Motif
Other DBs
NCBI-ProteinID:
APB00279
UniProt:
A0A0B8NAM4
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All DBs
Position
6540014..6540967
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AA seq
317 aa
AA seq
DB search
MGAVQAKREKLPPRVDAFGGLVIVDKDGGWTSHDVVAKCRGLLRTKKVGHAGTLDPMATG
VLVLGVERATKLLGQLILTTKAYTATIRLGQSTITDDAEGEVTATAAAGHLTDAEIAARI
AELTGDIQQVPATVSAIKINGERAYARARAGEEVELAARPITVSRFEVLARRDIDTGATQ
FVDLDVEVECSSGTYIRALARDLGEKLGVGGHLTALRRTRVGPFTLEHARTLDQLAASAA
ADEPMLSLDIDAAVRAAFPVRDITDAQAGDLRNGRWLEPIGLQGVYAAIDPAGQAVALLK
ESGKRASSVMVVRPANL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgggagccgtgcaagccaagcgcgaaaagctgccgccgcgcgtcgacgccttcggcggg
ctggtcatcgtcgacaaggacggcggctggaccagccacgatgtggtggccaagtgccga
ggtctgttgcgtaccaagaaggtcgggcacgcgggcaccctcgatccgatggccaccggc
gtgctggtgctgggcgtggagcgggccaccaaactgctcggccagctgatcctgaccacc
aaggcctataccgccaccatccggctgggacagtccaccatcaccgatgacgccgagggc
gaggtgaccgccaccgcggcggccgggcatctcaccgacgccgagatcgccgcgcgcatt
gccgaattgaccggcgacatccagcaggtgcccgccacggtcagcgccatcaagatcaat
ggtgagcgcgcctacgcccgcgcccgcgccggtgaagaggtggagctggccgcccggccg
atcaccgtgagccgcttcgaggtcctcgcgcgccgtgatatcgacaccggggcaacgcaa
ttcgtggacctggatgtcgaggtggagtgctcctcgggcacctacatccgcgccctggcc
cgcgatctcggtgagaagctcggcgtcggcgggcatctcacggcgctgcgccgcacccgg
gtcggcccgttcaccctcgagcacgcccgcaccctggatcagctggccgcgtccgccgcg
gcggacgagccgatgctgagcctggatatcgacgcggccgtgcgtgccgcgttcccagtt
cgcgacatcaccgacgcccaggccggggatctgcgcaacggccgctggctggagccgatt
ggtctgcaaggggtctacgcggccatcgatccggccgggcaggcggtcgcgctactgaag
gagtccggcaagcgtgcctcctcggtcatggtggtccgccccgccaatctctga
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