Nocardia seriolae: NS506_07021
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Entry
NS506_07021 CDS
T04599
Name
(GenBank) Protein anoxia up-regulated
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
nsr
Nocardia seriolae
Brite
KEGG Orthology (KO) [BR:
nsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsr03400
]
NS506_07021
DNA repair and recombination proteins [BR:
nsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
NS506_07021
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
ResIII
FtsK_SpoIIIE
AAA
SLFN-g3_helicase
CbiA
AAA_19
AAA_16
AAA_6
AAA_7
P-loop_TraG
AAA_11
Motif
Other DBs
NCBI-ProteinID:
APB01049
UniProt:
A0ABC8B3I3
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Position
complement(7349287..7351041)
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AA seq
584 aa
AA seq
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MTTPQEKAAAARKAAEEAARIAAEAAAAAEAAEKEAADQDAAQKAAAQAAAADSGAKVAA
KTKGTAAPADSSDKDAAAAQEIAAGYAMEGLALELGAVITGGTVHPDARVRIPMKTMNRH
GLVAGATGTGKTKTVQGIAEQLSAAGVPVVLADIKGDLSGLAQQGQSNEKLLARAQETGD
PDWKPQGFPCEFVSLGTEGIGIPIRATITSFGPILLSKALGLNETQESTLGLIFPWSDQN
GFPLLDLKDLRAVIQFLTSPEGKEDLKGIGGVSAQTAGVILRALVNLEADGGDTFFGEPE
LDPADLMRTAGGLGVITLFELGAQAARPQMFSTFLMWVLADLFQTLPEVGDMDKPKLVFI
FDEAHLLFNGASKAFLNQVEQTVKLIRSKGVGVFFCTQLPTDIPNSVLSQLGARVQHALR
AFTPEDQAALSKTVRTYPKTATYDLEKALTSLGIGEAIVTVLSEKGAPTPVAWARMQPPR
SLMDTIGDDQITARAKQSTLYAKYGTTIDADSAYEILAEKLATAQQQAAEEAPAKSSRSS
KPAPEPESMAEKIVNNPAFKNLLRSAATVAGREISRSIFGTRRR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccccgcaggagaaggcagcggcggcacggaaggcggcggaggaggcggcgcgg
atcgcggccgaagcggcggccgccgccgaggccgcggagaaagaggcggccgatcaggac
gcggcgcagaaagcggccgcgcaagccgccgccgcagattcgggagccaaggtcgcggcg
aagacgaaaggcactgctgcaccggctgattcgtccgacaaggacgcggcggccgcgcag
gagatcgcggcggggtacgccatggaggggctggctctcgaactcggcgccgtgatcacg
ggcggcaccgtgcatcccgatgcgcgagtgcggattccgatgaagaccatgaaccggcac
ggcctggtcgcgggagcgaccggtaccggtaagaccaagaccgtgcaggggatcgccgag
cagctgtcggcggcgggggtgccggtggtgctggccgatatcaagggggacctgtcgggg
ctcgcgcagcaggggcagtccaatgagaagctgctcgcgcgtgcccaggagaccggcgat
ccggattggaagccgcaggggttcccgtgtgagttcgtgtcgctcggcaccgagggcatc
ggcatcccgattcgcgccaccatcacctcgttcggcccgatcctgctcagtaaggcgttg
gggctcaacgaaacccaggaatccaccctgggtctgatcttcccctggtcggatcagaac
ggcttcccgctgctggacctgaaggacctgcgcgcggtcatccagttcctcaccagcccc
gagggcaaggaggacctcaagggcatcggtggcgtctcggcccagaccgcgggcgtgatc
ctgcgggcactggtgaacttggaggccgacggcggcgacacgttcttcggtgagcccgaa
ctggatccggccgatctcatgcgcaccgcgggcgggctgggcgtcatcaccctgttcgag
ctgggtgcgcaggccgcgcgcccgcagatgttctctaccttcctgatgtgggtgctggcc
gatctgttccagaccctgcccgaggtcggcgacatggacaaacccaagctggtgttcatc
ttcgacgaggcgcacctgctgttcaacggcgcgtcaaaggcgttcctgaaccaggtcgag
cagaccgtcaagctgatccgctccaagggcgtcggcgtcttcttctgcacgcagctgccc
accgacatccccaactcggtgctgtcgcagctgggcgcgcgcgtgcagcacgccctgcgc
gcgttcacgccggaagatcaagcggcactgtcgaagacggtccgcacctatcccaagacg
gcgacctacgacctggaaaaggcgctcacctcactgggcatcggcgaggccatcgtgacg
gtgctgtcggagaagggcgcgcccaccccggtcgcctgggcccgtatgcagccgccgcgc
tcgctcatggacaccatcggtgacgaccagatcaccgctcgcgcaaagcaatccacgctc
tacgcgaagtacggcaccacgatcgacgcggattcggcctacgagatcctggccgagaag
ctggcgaccgcacagcagcaggcggcggaggaggccccggccaagtcctcgcgctcgtcc
aagcccgcacccgagccggagtccatggccgagaagatcgtcaacaacccggccttcaag
aacctgctccgctcggcggccaccgtcgccgggcgcgagatcagccgcagcatcttcggc
acccggcgacggtag
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