Nocardia seriolae: NS506_07378
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Entry
NS506_07378 CDS
T04599
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
nsr
Nocardia seriolae
Pathway
nsr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NS506_07378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsr03400
]
NS506_07378
Enzymes [BR:
nsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NS506_07378
DNA repair and recombination proteins [BR:
nsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NS506_07378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
APB01398
UniProt:
A0A0B8NRE6
LinkDB
All DBs
Position
complement(7712094..7712900)
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AA seq
268 aa
AA seq
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MAKIISTCNVNGVRAASGKGLLEWLAATEADIVCLQETRATDEQTRSALAPALDAGWFLS
HAEPGLKGRAGVAILSRKEPDAVRVGVGLLADGTWTPVEEFATLGRYVEADFDELTIASV
YVHTGEADTPMQDEKYRFLDAIGARMLAHPGEFVIMGDWNVAHTELDIKNWKGNVKNAGF
LPQERAWVSSMLAAGYHDVVRDLHPGVPGPYSWHSYRGRAFDKDAGWRIDYALARGDIAS
RAKQAVVEKAPTYAERWSDHAPVTVQYR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaaatcatcagtacgtgcaacgtcaatggggtgcgtgccgcgtcgggcaaggga
ctgctcgaatggctggccgctaccgaggccgatatcgtctgcctgcaggagactcgggcg
accgatgagcaaacccgtagcgcgctagctcccgcgctggacgcgggctggttcctgagc
catgccgagccgggtctgaagggccgggcgggcgtggccatcctgtcccgcaaggagccc
gacgcggtgcgcgtcggggtcggcctgctcgcggacggaacctggactcccgtcgaggaa
ttcgccaccctgggccgctacgtcgaggccgacttcgacgagctgaccatagccagcgtc
tatgtccacaccggcgaggccgacacgccgatgcaggacgagaagtaccgcttcctcgac
gccatcggcgcgcgcatgctcgcccaccccggcgagttcgtgatcatgggcgactggaat
gtcgcgcacaccgaactggacatcaagaactggaagggcaacgtcaagaacgcgggcttc
ctcccgcaggaacgcgcctgggtctcgtccatgctcgccgccggataccacgacgtggtc
cgcgacctgcaccccggcgtccccggcccgtactcctggcactcctaccgcggccgcgcc
ttcgacaaggacgccggttggaggattgattacgccctggcccgaggcgacatcgcgtct
cgcgccaagcaggccgtcgtcgagaaagcccccacttacgccgaacgctggtcagaccac
gccccggtcacggttcagtaccgctga
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