Notechis scutatus (mainland tiger snake): 113409838
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Entry
113409838 CDS
T09026
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113409838 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nss04515
]
113409838 (ROBO1)
Cell adhesion molecules [BR:
nss04515
]
Immunoglobulin superfamily
ROBO family
113409838 (ROBO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
113409838
NCBI-ProteinID:
XP_026519881
Ensembl:
ENSNSUG00000016449
UniProt:
A0A6J1TNH4
LinkDB
All DBs
Position
Unknown
AA seq
1614 aa
AA seq
DB search
MFAEFVHVCLFGLICLSSGSRLRQDDFPPRIIEHPSDLIVSKGEPATLNCKAEGRPVPTI
EWYKGGERVETDKDDPRSHRMLLPTGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDRDERIT
IRGGKLMITYTRKNDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTIDDSA
EFNCEARGDPVPTLRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKT
EASATLTVQVVSEPPHFIVKPRDQVATLGRTITFQCEATGNPQPAIFWRREGSQNLLFSY
QPPQSSNRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSITTKAYLEVTDVIVDRPPPV
IRQGPVNQTVAVDGTLILNCIATGTVMPIILWRKDGVLISTQDSRIKQLESGALQIRYAK
LGDSGRYTCIASTSSGEASWSAYIEVQEFGIPVQPPRPTDPNLIPSAPSKPEITDVRRNT
VTLSWKPNLNSGATPTSYIMDAFSHAAGSSWQTVAENVKTETFAVKGLKPNAIYLFLIRA
ANAYGISDPSQISDPVKTQDVPPTNQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWT
VDQQSQYIQGYKILYRPTASSQGESEWLIFDVRTPTKNSIVIPELKKGVNYEIKARPFFN
EFQGADSEMKFAKTLEEAPSAPPQSVSVTKNDGNGTAIVVTWQPPPEDTQNGMVQEYKVW
CLGNESRYHINKTVDGSTFSLIIPSLIPGIRYSVEVAASTGAGTGVKSEPQFIQLDSYGN
PVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRSGLASSYAGIR
KVPSFTFTPTVTYQRGGEAVSSGGRPGLLNINEPTAQPWLADTWPNTGNNHNDCSINCCT
SGNGNSDSNLTTYSRPADCIANYNNQLENKQTNLMLPESTVYGDVDLSNKINEMKTFNSP
NLKDGRFVNQPGQPTPYATTQLIQSNISNNVNSNSADSNEKHWKPSTQQKQEVAPIQFNI
MEQNKLNKDYRVNDNVTTIPYNQTYDQNTGGSYNSSDRGSSTSGSQGHKKGAKTPKTTKQ
AGMNWAEVLPPPPVHPPPHNDSEDYNLSMNESYDHEIPCPLPPTRMYIRQDELEEEDDER
GPTPPIRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCQEEIAHLQHPPDRRRQPVS
PPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEDEADVEIVKMQNKRLVLRGLEQTPASS
VGDLESSVTGSMINGWGSASEDDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKV
AKRQMQDSVAGHRHYHASHCPRPTSPVSTDSNMSAAIIQRVRPTKKQKHQQGHLRREVYT
DDLPPPPVPPPAIKSPTAQSKSQVDIRPVMLPKLSSIEPRTERAVERKGIGYKGKEGSDG
CQHSDMWTCSGERRESQEQQSDSKLRGNKPARRDGTPAKTHPLPEDILPYCRPTFPTSNN
TRDPSSSSSMSSRGSGSRQKAEQANLSRKNIAEMQVFGTYDQGEDEDELQETES
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagagtttgttcatgtctgtctctttggattgatatgtctttcttcaggttca
cgtcttcgtcaagatgatttcccacctcgaattattgaacatccttcagatttaattgtt
tctaaaggagaaccagcaactctgaactgcaaggctgaaggcagaccagttccaacaatt
gaatggtacaaaggaggagaaagggttgaaactgataaagatgatcctcgttctcatcgg
atgttgctaccgactggatctttatttttcttacgtatagttcatggacgcaaaagtagg
cctgatgaaggagtttatgtctgtgtagccaggaattaccttggtgaagctgtgagtcac
aatgcatcattggaagtagcaatactgcgagatgacttcagacaaaacccttcagatgtt
atggtagcggtaggtgagccagctgtaatggaatgccaacctcctcgaggccaccctgaa
cctacaatttcatggaaaaaggatggatctcctttggatgatagagatgaaagaattaca
atcagaggagggaagctgatgattacctataccagaaaaaatgatgcagggaaatatgtc
tgtgttggaacaaatatggttggagaaagagaaagtgaagtagcagagcttactgttctt
gaaagaccatcatttgtaaagagaccaagtaatttagcagtaaccatagatgacagtgca
gaatttaattgtgaagcgcgtggagatccagtgccaacactgagatggcgaaaggatgat
ggagaactacctaaatcaagatatgaaatacgtgatgaccacaccttgaaaatccggaaa
gttatggcaggagacatgggttcttatacttgtgttgcagaaaatatggttggaaaaaca
gaagcatcagcaactttaacagttcaagttgtatctgagccaccacattttattgttaaa
cctcgagatcaagtggctacattaggtagaactatcactttccagtgtgaagcaactggg
aaccctcagccagcaatattttggcgaagagaaggaagccagaatttactgttctcgtac
caacctcctcagtcttccaaccggttttcagtctctcagacgggtgatcttaccattaca
aatgtccagagatctgatgttggatattatatctgccagactttaaatgttgcaggcagc
atcacaacaaaagcatacttggaggtaactgatgtgattgtagaccgacctccccctgtc
attcgtcagggtcctgtcaatcaaactgtagctgtagatggtactttaattctcaactgt
atagctacaggcactgtcatgcccataattctctggaggaaagatggcgtccttatctct
actcaggattctcgaatcaagcaactggaatctggggcactacagattcgatatgcaaag
ctgggtgattctggtcggtacacatgtattgcctcaacctcaagcggtgaagcatcatgg
agtgcttacattgaagttcaagaatttggcattccagtacagccaccacgacctactgac
cctaatttgattcctagtgcaccatcaaaacctgaaattactgatgtcagaagaaataca
gtaaccctctcatggaaacctaatttgaattcaggtgcaactccaacctcttatataatg
gatgccttcagccatgcagctggtagcagctggcaaactgtagcagaaaatgtgaaaaca
gaaacatttgcagtaaaaggactgaaaccaaatgccatttatctgttcctcattcgtgca
gccaatgcatatggaattagtgatcccagtcagatatctgacccagtgaaaacccaagat
gttccaccaacaaatcagggtgtggatcacaaacaagtacaaagagagctgggtgacgtt
gtcctacatctccataatccaacaattctttcttcttcttctattgaagttcactggaca
gttgaccaacaatcccaatatattcagggatataaaattttgtatagaccaacagcttca
tctcagggggaatctgaatggctgatttttgatgtgaggacaccaacaaaaaacagcatt
gtaattcctgaactcaaaaaaggagtgaactacgaaattaaggctcggcctttttttaat
gagtttcaaggtgctgatagtgaaatgaaatttgccaaaactttggaagaagctccaagt
gctcctccacaaagtgtttcagtcaccaagaatgatggaaatggcactgcaattgtagta
acttggcagcctcccccagaggacacacaaaatggaatggttcaggaatacaaggtttgg
tgccttggaaatgaaagtcgataccatataaataagacagtggacggttctacattttct
ctaataattccatctctaattcctggtattagatatagtgttgaggtagcagcaagtact
ggagctggaactggagtaaagagtgaaccacaatttattcaattagattcctatggaaac
cctgtgtcacctgaagaccaagtcagtttagctcagcagatttcagatgttgtaaaacag
ccagcattcattgctggaattggtgctgcttgctggattatccttatggttttcagtatt
tggttatatcgccaccgaaaaaaacgaagtggtcttgccagttcttatgctggtatcaga
aaagtcccgtcttttaccttcacaccaacagtaacatatcaaagaggaggagaagctgta
agcagtggaggcaggccaggtcttttaaacatcaatgaacctactgctcagccctggctt
gcagatacatggcctaatactgggaataatcataatgattgttctattaactgttgtaca
tcaggcaatggaaacagtgacagcaaccttactacttattctcgaccagctgactgtata
gcaaattacaacaatcagctggagaataagcaaacaaacttgatgttgcctgaatcaaca
gtttatggtgatgtggatctgagcaataaaatcaatgagatgaaaacgttcaatagccca
aatctgaaagatggaagatttgtcaaccaaccaggacagcctactccatatgccactact
caacttatccaatcaaacataagcaataatgtaaacagtaatagtgctgattcaaatgaa
aagcattggaagccatctacacaacagaaacaagaagttgcaccaattcaattcaacata
atggaacaaaacaaattaaacaaagattaccgtgtaaatgataatgttacaactattcca
tataatcagacctatgatcagaatacaggagggtcctacaacagttcagacagaggaagc
agtacatcagggagccaagggcataaaaagggtgctaaaactccaaagacaactaaacaa
gctggaatgaattgggcagaagtacttccaccacctcctgttcatccacctccccataat
gatagtgaagattacaacctctctatgaatgaaagctatgatcatgaaattccttgccca
ctaccaccaacaagaatgtatatacggcaggatgagctggaagaagaagatgacgaacgg
ggtcctacaccaccaattcgaggagcagcttcatctccagcagcagtgtcctatagccac
cagtctactgctacactaactccttctcctcaagaagaattgcagcctatgctgcaagat
tgtcaggaagaaatagcccatttgcaacacccaccagaccgacggcgtcaacctgtgagc
ccacctccacctcccaggcctatttcaccaccacatacttatggttacatttcgggacct
cttgtatctgacatggatactgatgcaccagaagaagaagatgaagcagacgtagaaata
gtaaagatgcaaaacaaaaggcttgttttgcgtggccttgaacagacacctgcttcaagt
gtgggagatctggagagttctgtgacaggttccatgatcaacggatggggttcagcctca
gaagatgataacatttcaagtggacgatctagtgttagttcatcagatggatcctttttt
acagatgcagattttgcacaagctgttgcagcagcagcggaatatgctggtcttaaagta
gcaaaacgtcagatgcaagattctgtggcaggccatagacattatcatgcctcacactgc
cctagacctactagtcctgtctccactgacagcaacatgagtgctgctataattcagagg
gttcggcctaccaaaaagcaaaagcaccagcaaggacatctgcgcagagaagtctacaca
gatgatctaccacccccaccagtgccacctccagctataaaatctcctactgcccagtcc
aaatctcaagtggatatccgccctgtgatgttgccaaagttgtcctctatagaaccaaga
acagaaagagcagttgaaagaaaaggaataggctataagggaaaagaaggttctgatggc
tgtcagcattctgatatgtggacatgttcaggggagcgtagagaatcgcaggaacagcaa
agtgatagtaagctaagaggaaacaaaccagcaagaagagatggcacaccagcaaaaaca
catcctctcccagaggatattttgccatactgtagaccaacatttccaacatctaataat
accagagatcctagttcttcaagttccatgtcatccagaggatcaggaagtagacaaaag
gcagagcaagcaaacttaagtcgaaaaaatattgcagaaatgcaggtatttggaacttat
gatcaaggagaagatgaagatgaattgcaggagaccgaaagctga
DBGET
integrated database retrieval system
