Notechis scutatus (mainland tiger snake): 113409926
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Entry
113409926 CDS
T09026
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04510
Focal adhesion
nss04512
ECM-receptor interaction
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113409926 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113409926 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113409926 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nss04147
]
113409926 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
nss00536
]
113409926 (COL4A4)
Exosome [BR:
nss04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113409926 (COL4A4)
Glycosaminoglycan binding proteins [BR:
nss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113409926 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
113409926
NCBI-ProteinID:
XP_026520043
UniProt:
A0A6J1TU63
LinkDB
All DBs
Position
Unknown
AA seq
1396 aa
AA seq
DB search
MQRWLIIVASVQPSYGGSYIGHCGGEDCSICRCFPEKGSRGQPGHPGVQGPIGALGSIGP
VGLPGEKGQRGDPGLPGPLGERGNMGPTGVPGFSGLDGMPGLPGIEGPRGKPGADGCNGS
RGDPGLPGESGCIGPKGSFGIPGQKGEKGNFIYSSEFIQGSTGERGDPGPQGMPGPGGKK
GPRGPSGFPGEPGEQGFQGQPGLPGDQGNPGIGVEGQKGEPGDVGPPGSPGQPLLVGPPS
SRLLKGEKGIKGMPGSTGSRGLCGHKGAFAIGDKGDKGIPGLPGKQGIPGSYGSPGFPGN
KGKIGTHGIPGQDGLIGIKGDPGENGQPGPPGPRGTALTGPKGIQGDPGDPGLPGERGTD
GMPGSPGGKGRQGEDGLSFPGPKGALGVEGPQGFHGGPGFSAQSSTAPGRPGSPGLPGFP
GVPGRQGLPGPPGVACKGRGSPGEPGAKGQIGSPGERGGKGEKGNPGNCSCGLGPCGPPG
KRGLPGIPGRKGEVGTPGKYGRTGDPGFPGRRGEPGSLGLPGPFGLTGEKGDKGDSVEIR
IKGVKGQRGVPGIHGFPGINGAAGKTGDGGLPGDKGIQGEDGRNIQGDKGFPGDPGIPGS
RGQMGTPGLGIQGPQGVPGLPGDPGGPGMKGTSGPKGQKGITLPSGRAYPGNPGIPGFKG
IPGPKGLRGPPGPPGPNGFDGFKGQKGRLGTSGNPGPEGLRGETGDPGDPGEQGSSLDGP
PGLPGFPGLPSPKGVPGDATYSPPGTPGKSGLPGLPGLPGLRGDPGFPGLPGQPGTPGLP
GAKGLRGQKGDTGVMGYPGSPGLACEKILEGLPGPSGSFGAQGPKGLKGVKGPQGDMGAP
GPAGMKGLPGAPGILGAPGFPGLRGDPGSSGENGLPGLPGTKGDKGSQGMQGFPGFPGTA
GEMGEPGVKGVEGKTGLSGPPGEFGRKGSNGELGLPGDKGSISILQVKGQNGELGFPGDE
GLPGVQGDKGNAGFRGIPGPPGKQAAPGTQKGQPGDAGHSGSQGPQGPPGPPGVRGIIGF
QGQKGDQGAQGPSGLPGHPGLGGQKGSKGSRGDPATHYGDPGKKGPIGVQGLPGFPGLPG
DQGTLGLRGQQGKQGSKGLPGHPGIPGFPGVQGGAGFPAPPGEPGNPGFLGTPGFPGSPG
NPGRKGLLGSPGVNGVNGQKGQKGLPGPPGLSVMGPPGCLGEQGPKGNRGEPGLPGSTQR
GPPGDKGLRGPPGKPGVSGSAGLMGQPPETRTCGFPGDQGPAGSDGIRGPPGKPGPPGKI
ILIKGDPGDSGTLGSPGVPGPCGKQGTKGFPGNQGRKGSKGLTGKPGLQGPPGVPGEPGA
QGLQGPIGPVGQKGDPGEPGKVDYSSCPKIPGPPGVLGPRGSPGFVGLRGPIGFPGPPGR
KANCGRSKFFQIQFWE
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggtggctaataattgttgcttcagtccagccatcttatgggggttcatatatt
ggacattgtggtggagaagattgttccatttgccgatgctttcctgaaaaaggctcgaga
gggcaacctggtcacccaggagtccagggtccaattggtgctctgggttccattggacct
gttggtttgccaggagaaaaaggccagagaggtgatcctggtctacctgggccacttggt
gaaagaggaaatatgggtccaactggagttccaggattttcaggtctagatggaatgcct
gggctaccaggaattgaaggacccagagggaagcctggggcagatggatgtaatggttca
agaggtgatccaggacttccaggagaaagtggatgcattggaccaaaagggtcatttggt
attcctggccaaaaaggagaaaaaggaaacttcatatattcttctgaattcattcaagga
tcaactggagaaagaggggatcctggacctcaaggcatgcctggtcctggaggaaaaaag
ggacccagaggtccatctggatttccaggcgaaccgggtgagcagggttttcaaggtcaa
cctggtttaccaggtgatcaggggaatccaggaattggagtggaaggacaaaagggagag
ccgggtgatgtaggacctcctggatctccaggacagccattactcgttggaccgcctagt
tctagactattaaagggagaaaaaggaataaagggaatgcctggatctactggctcaaga
ggattgtgcggccacaaaggtgcatttgcaattggagacaagggtgataaaggaattcct
ggtcttcctggaaagcagggaattcctggctcatatggttctccaggtttcccaggaaac
aagggtaaaattggaacacatggaattcctggtcaagatggcttgataggcattaagggg
gatcctggagagaatgggcagcctgggccacccggacctcgaggaactgcacttactgga
ccaaagggtattcaaggagaccccggagaccctggacttcctggggagagaggaacagat
ggaatgcctggttctcctggtggcaaaggaaggcaaggggaagatggactcagctttcct
ggtcctaaaggtgcattgggtgtagagggtcctcaaggcttccatggaggccctggtttt
tcagctcagtctagtacagctccaggaaggccaggatctccaggattacctggttttcca
ggagtaccaggaagacagggcttgcctgggccacccggtgttgcctgtaaggggagaggt
tcccctggagaaccaggagctaaaggtcaaataggatcacctggagaaagaggtggaaaa
ggagagaaagggaatccagggaactgttcgtgtgggcttggcccttgtggcccacctggc
aaacgaggtctgccagggatacctgggagaaaaggagaagtgggaacacctggaaaatat
ggaagaacaggtgatcccggttttcctggtagaagaggagaaccaggatccttaggattg
ccaggtccatttggactgacaggtgaaaaaggagataaaggtgactcggttgaaataagg
atcaaaggagtaaaaggacaaagaggtgttccaggaatacatggatttccaggaataaat
ggagctgctggcaagactggagatggaggattgccgggtgataaagggattcaaggagaa
gatggaagaaatatacaaggtgataaaggatttcctggagaccctggaattcctggctca
agaggtcaaatggggacaccaggtttggggattcagggcccacaaggtgtcccaggccta
cccggagatccaggaggccctggtatgaaaggaacatctgggccaaaaggtcaaaaaggc
attactcttccgagtggaagagcatatcctgggaatccaggtataccaggatttaaaggt
ataccaggtccaaaagggttaagaggcccacctggcccacctggacccaatggttttgat
ggtttcaaaggccagaagggtagactaggaacatcaggcaatcctggtccagaaggttta
aggggtgagactggtgatccaggtgatccaggtgaacaaggttcaagtctggatggccct
cctggattgccaggctttcctgggcttccaagtccaaaaggtgttccaggtgacgctacc
tacagccctccaggtactccaggcaaaagtggtcttccagggctaccaggtttgccaggt
ctaagaggtgaccctggttttcctgggcttccagggcaacctggcacaccaggacttcca
ggagctaaaggtctccgaggccaaaaaggtgacacaggagtgatgggttatcctggatca
cctggcctggcctgtgagaaaatactggaggggctaccaggaccatcaggctcttttgga
gcacaaggacctaaaggattgaagggtgttaaaggtcctcaaggagatatgggagcacca
ggtccagctggaatgaaaggattgccaggagcccctgggatcctaggagcacctggcttt
ccaggcttacgaggagatccaggatcttcaggggaaaatggactgccaggtcttccagga
acaaaaggagacaaaggatcccaaggcatgcaaggtttcccgggcttcccaggaactgca
ggagaaatgggagaaccaggtgtaaaaggagtggaaggaaaaactggtctgtctggtcct
cctggagaatttgggagaaagggttccaacggtgaactgggattaccaggagacaagggc
agcatcagtatcttgcaagtaaaaggacaaaatggagaactaggctttcctggtgatgag
ggattaccaggggtccaaggtgataaaggcaatgctggattcagaggaatcccgggacca
ccaggcaaacaagcagctccaggcactcaaaagggccagccgggcgatgctggacactct
ggttcccagggcccgcaaggtcccccagggcctccaggtgtgagagggataattggtttc
caaggacaaaaaggcgatcagggtgcacagggaccatcaggtcttcctggacatccagga
ttaggtggccaaaaaggatcaaaaggtagcagaggtgacccagccactcattatggggat
cctggcaagaaaggccctataggagttcaaggattaccaggatttcctggattacctgga
gaccaaggtacattaggtcttcgaggacaacaaggaaaacagggttccaaagggttgcct
ggacacccaggaatacctggattcccaggtgtgcagggaggtgcagggtttccagcacct
ccaggtgaaccaggtaaccctggttttttgggaactccaggtttcccaggatcacctggt
aacccaggtagaaaaggcttattgggatcacctggagtaaatggtgtaaatggacaaaaa
ggtcaaaaaggtttgccaggacccccaggtttaagtgtaatgggacctccagggtgccta
ggagaacaagggccaaaaggtaacagaggagaacctgggcttccaggaagtactcaacga
ggtcctccaggagacaaaggcctaagaggtcctcctggtaagccaggtgtttctggttct
gctggccttatgggtcagcctcctgaaactagaacttgtggctttccaggagaccaaggt
ccagctggctcagatggcattagaggcccaccaggcaaacctgggcctccaggaaaaatt
atacttattaaaggagatccaggggactctggtactttgggctcacccggtgttcctggt
ccatgtggtaaacagggaactaaaggttttccaggaaaccaaggaagaaaaggctcaaaa
ggtctgacagggaagcctggtctgcaaggaccacctggtgtccccggggagcctggagct
caaggtcttcaggggccaattggtcctgtgggccaaaagggtgatccaggagaacctgga
aaagttgattactcatcttgtcctaagattccagggcctcctggagtattaggcccacga
ggatcaccaggctttgtaggattaagagggccaattggctttcctggacctccaggtaga
aaggccaactgtggaaggtcaaagttttttcagatccagttttgggagtag
DBGET
integrated database retrieval system