KEGG   Notechis scutatus (mainland tiger snake): 113409926
Entry
113409926         CDS       T09026                                 
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
nss  Notechis scutatus (mainland tiger snake)
Pathway
nss04510  Focal adhesion
nss04512  ECM-receptor interaction
nss04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:nss00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113409926 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113409926 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113409926 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nss04147]
    113409926 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:nss00536]
    113409926 (COL4A4)
Exosome [BR:nss04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   113409926 (COL4A4)
Glycosaminoglycan binding proteins [BR:nss00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   113409926 (COL4A4)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 113409926
NCBI-ProteinID: XP_026520043
UniProt: A0A6J1TU63
LinkDB
Position
Unknown
AA seq 1396 aa
MQRWLIIVASVQPSYGGSYIGHCGGEDCSICRCFPEKGSRGQPGHPGVQGPIGALGSIGP
VGLPGEKGQRGDPGLPGPLGERGNMGPTGVPGFSGLDGMPGLPGIEGPRGKPGADGCNGS
RGDPGLPGESGCIGPKGSFGIPGQKGEKGNFIYSSEFIQGSTGERGDPGPQGMPGPGGKK
GPRGPSGFPGEPGEQGFQGQPGLPGDQGNPGIGVEGQKGEPGDVGPPGSPGQPLLVGPPS
SRLLKGEKGIKGMPGSTGSRGLCGHKGAFAIGDKGDKGIPGLPGKQGIPGSYGSPGFPGN
KGKIGTHGIPGQDGLIGIKGDPGENGQPGPPGPRGTALTGPKGIQGDPGDPGLPGERGTD
GMPGSPGGKGRQGEDGLSFPGPKGALGVEGPQGFHGGPGFSAQSSTAPGRPGSPGLPGFP
GVPGRQGLPGPPGVACKGRGSPGEPGAKGQIGSPGERGGKGEKGNPGNCSCGLGPCGPPG
KRGLPGIPGRKGEVGTPGKYGRTGDPGFPGRRGEPGSLGLPGPFGLTGEKGDKGDSVEIR
IKGVKGQRGVPGIHGFPGINGAAGKTGDGGLPGDKGIQGEDGRNIQGDKGFPGDPGIPGS
RGQMGTPGLGIQGPQGVPGLPGDPGGPGMKGTSGPKGQKGITLPSGRAYPGNPGIPGFKG
IPGPKGLRGPPGPPGPNGFDGFKGQKGRLGTSGNPGPEGLRGETGDPGDPGEQGSSLDGP
PGLPGFPGLPSPKGVPGDATYSPPGTPGKSGLPGLPGLPGLRGDPGFPGLPGQPGTPGLP
GAKGLRGQKGDTGVMGYPGSPGLACEKILEGLPGPSGSFGAQGPKGLKGVKGPQGDMGAP
GPAGMKGLPGAPGILGAPGFPGLRGDPGSSGENGLPGLPGTKGDKGSQGMQGFPGFPGTA
GEMGEPGVKGVEGKTGLSGPPGEFGRKGSNGELGLPGDKGSISILQVKGQNGELGFPGDE
GLPGVQGDKGNAGFRGIPGPPGKQAAPGTQKGQPGDAGHSGSQGPQGPPGPPGVRGIIGF
QGQKGDQGAQGPSGLPGHPGLGGQKGSKGSRGDPATHYGDPGKKGPIGVQGLPGFPGLPG
DQGTLGLRGQQGKQGSKGLPGHPGIPGFPGVQGGAGFPAPPGEPGNPGFLGTPGFPGSPG
NPGRKGLLGSPGVNGVNGQKGQKGLPGPPGLSVMGPPGCLGEQGPKGNRGEPGLPGSTQR
GPPGDKGLRGPPGKPGVSGSAGLMGQPPETRTCGFPGDQGPAGSDGIRGPPGKPGPPGKI
ILIKGDPGDSGTLGSPGVPGPCGKQGTKGFPGNQGRKGSKGLTGKPGLQGPPGVPGEPGA
QGLQGPIGPVGQKGDPGEPGKVDYSSCPKIPGPPGVLGPRGSPGFVGLRGPIGFPGPPGR
KANCGRSKFFQIQFWE
NT seq 4191 nt   +upstreamnt  +downstreamnt
atgcagaggtggctaataattgttgcttcagtccagccatcttatgggggttcatatatt
ggacattgtggtggagaagattgttccatttgccgatgctttcctgaaaaaggctcgaga
gggcaacctggtcacccaggagtccagggtccaattggtgctctgggttccattggacct
gttggtttgccaggagaaaaaggccagagaggtgatcctggtctacctgggccacttggt
gaaagaggaaatatgggtccaactggagttccaggattttcaggtctagatggaatgcct
gggctaccaggaattgaaggacccagagggaagcctggggcagatggatgtaatggttca
agaggtgatccaggacttccaggagaaagtggatgcattggaccaaaagggtcatttggt
attcctggccaaaaaggagaaaaaggaaacttcatatattcttctgaattcattcaagga
tcaactggagaaagaggggatcctggacctcaaggcatgcctggtcctggaggaaaaaag
ggacccagaggtccatctggatttccaggcgaaccgggtgagcagggttttcaaggtcaa
cctggtttaccaggtgatcaggggaatccaggaattggagtggaaggacaaaagggagag
ccgggtgatgtaggacctcctggatctccaggacagccattactcgttggaccgcctagt
tctagactattaaagggagaaaaaggaataaagggaatgcctggatctactggctcaaga
ggattgtgcggccacaaaggtgcatttgcaattggagacaagggtgataaaggaattcct
ggtcttcctggaaagcagggaattcctggctcatatggttctccaggtttcccaggaaac
aagggtaaaattggaacacatggaattcctggtcaagatggcttgataggcattaagggg
gatcctggagagaatgggcagcctgggccacccggacctcgaggaactgcacttactgga
ccaaagggtattcaaggagaccccggagaccctggacttcctggggagagaggaacagat
ggaatgcctggttctcctggtggcaaaggaaggcaaggggaagatggactcagctttcct
ggtcctaaaggtgcattgggtgtagagggtcctcaaggcttccatggaggccctggtttt
tcagctcagtctagtacagctccaggaaggccaggatctccaggattacctggttttcca
ggagtaccaggaagacagggcttgcctgggccacccggtgttgcctgtaaggggagaggt
tcccctggagaaccaggagctaaaggtcaaataggatcacctggagaaagaggtggaaaa
ggagagaaagggaatccagggaactgttcgtgtgggcttggcccttgtggcccacctggc
aaacgaggtctgccagggatacctgggagaaaaggagaagtgggaacacctggaaaatat
ggaagaacaggtgatcccggttttcctggtagaagaggagaaccaggatccttaggattg
ccaggtccatttggactgacaggtgaaaaaggagataaaggtgactcggttgaaataagg
atcaaaggagtaaaaggacaaagaggtgttccaggaatacatggatttccaggaataaat
ggagctgctggcaagactggagatggaggattgccgggtgataaagggattcaaggagaa
gatggaagaaatatacaaggtgataaaggatttcctggagaccctggaattcctggctca
agaggtcaaatggggacaccaggtttggggattcagggcccacaaggtgtcccaggccta
cccggagatccaggaggccctggtatgaaaggaacatctgggccaaaaggtcaaaaaggc
attactcttccgagtggaagagcatatcctgggaatccaggtataccaggatttaaaggt
ataccaggtccaaaagggttaagaggcccacctggcccacctggacccaatggttttgat
ggtttcaaaggccagaagggtagactaggaacatcaggcaatcctggtccagaaggttta
aggggtgagactggtgatccaggtgatccaggtgaacaaggttcaagtctggatggccct
cctggattgccaggctttcctgggcttccaagtccaaaaggtgttccaggtgacgctacc
tacagccctccaggtactccaggcaaaagtggtcttccagggctaccaggtttgccaggt
ctaagaggtgaccctggttttcctgggcttccagggcaacctggcacaccaggacttcca
ggagctaaaggtctccgaggccaaaaaggtgacacaggagtgatgggttatcctggatca
cctggcctggcctgtgagaaaatactggaggggctaccaggaccatcaggctcttttgga
gcacaaggacctaaaggattgaagggtgttaaaggtcctcaaggagatatgggagcacca
ggtccagctggaatgaaaggattgccaggagcccctgggatcctaggagcacctggcttt
ccaggcttacgaggagatccaggatcttcaggggaaaatggactgccaggtcttccagga
acaaaaggagacaaaggatcccaaggcatgcaaggtttcccgggcttcccaggaactgca
ggagaaatgggagaaccaggtgtaaaaggagtggaaggaaaaactggtctgtctggtcct
cctggagaatttgggagaaagggttccaacggtgaactgggattaccaggagacaagggc
agcatcagtatcttgcaagtaaaaggacaaaatggagaactaggctttcctggtgatgag
ggattaccaggggtccaaggtgataaaggcaatgctggattcagaggaatcccgggacca
ccaggcaaacaagcagctccaggcactcaaaagggccagccgggcgatgctggacactct
ggttcccagggcccgcaaggtcccccagggcctccaggtgtgagagggataattggtttc
caaggacaaaaaggcgatcagggtgcacagggaccatcaggtcttcctggacatccagga
ttaggtggccaaaaaggatcaaaaggtagcagaggtgacccagccactcattatggggat
cctggcaagaaaggccctataggagttcaaggattaccaggatttcctggattacctgga
gaccaaggtacattaggtcttcgaggacaacaaggaaaacagggttccaaagggttgcct
ggacacccaggaatacctggattcccaggtgtgcagggaggtgcagggtttccagcacct
ccaggtgaaccaggtaaccctggttttttgggaactccaggtttcccaggatcacctggt
aacccaggtagaaaaggcttattgggatcacctggagtaaatggtgtaaatggacaaaaa
ggtcaaaaaggtttgccaggacccccaggtttaagtgtaatgggacctccagggtgccta
ggagaacaagggccaaaaggtaacagaggagaacctgggcttccaggaagtactcaacga
ggtcctccaggagacaaaggcctaagaggtcctcctggtaagccaggtgtttctggttct
gctggccttatgggtcagcctcctgaaactagaacttgtggctttccaggagaccaaggt
ccagctggctcagatggcattagaggcccaccaggcaaacctgggcctccaggaaaaatt
atacttattaaaggagatccaggggactctggtactttgggctcacccggtgttcctggt
ccatgtggtaaacagggaactaaaggttttccaggaaaccaaggaagaaaaggctcaaaa
ggtctgacagggaagcctggtctgcaaggaccacctggtgtccccggggagcctggagct
caaggtcttcaggggccaattggtcctgtgggccaaaagggtgatccaggagaacctgga
aaagttgattactcatcttgtcctaagattccagggcctcctggagtattaggcccacga
ggatcaccaggctttgtaggattaagagggccaattggctttcctggacctccaggtaga
aaggccaactgtggaaggtcaaagttttttcagatccagttttgggagtag

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