Notechis scutatus (mainland tiger snake): 113410042
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Entry
113410042 CDS
T09026
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113410042 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nss04121
]
113410042 (TRIP12)
Enzymes [BR:
nss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113410042 (TRIP12)
Ubiquitin system [BR:
nss04121
]
Ubiquitin ligases (E3)
HECT type E3
113410042 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
113410042
NCBI-ProteinID:
XP_026520216
Ensembl:
ENSNSUG00000014671
UniProt:
A0A6J1TPF4
LinkDB
All DBs
Position
Unknown
AA seq
2069 aa
AA seq
DB search
MSNRPNNSPGGSLRRSQRNTVGAQSQDDAVGGRSHLGQAKHKARSPSESRKSISKAPKVQ
SNTTTEQSKGHFSKRGCSSSAIIIPQQEALDTDSTLEQQKSGQVSKRDSSRGVKRSASPD
YNQTNSPSPAKKTKALQHADSSSDLERNKSQTKSKKRHLHQEQESKSSQLPSTSKAHTRK
GGATVSSRNQKRKRTETLPIVKSRSATEPTGSEERPAKPTKLASKSVSSAKAGCSTITDS
SSSASTSSSSSVVASASSAVSQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEQNKIGG
SSKFDWAARFSPKVSLPKTKLSLPGSSKPEASKPGPSGLQAKLASLRKSTKKRSESPPAE
LPSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVDSSAARADEA
PQGAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRT
IGSGASSKAQQLLQGLQATDESQQLQSVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQ
MEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLS
RRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQR
LTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIM
VVRMFSLMCSNCPMLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSL
ICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVG
EDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANASTSGHPESKKDDARAQL
MKEDPDLAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAV
SSHIASMLSSQDLKIVVGALQMAEILMQKLSDIFSVYFRREGVMHQVKNLAESEALLTSP
PKACTNGSGTLSATTTVSTGTATTASNAASDLGSPSLQHSREDSLDLSPQGRLSDVLKRK
RLPKRGPRRPKYSPPRDEDKVDNQAKSPTATQSPKSSFLASLNPKTWGRLSTQSNSNNIE
PARTAGVSGLARAASKDTISNNREKIKGWVKEQAHKFVERYFSSENMDGSNPALNVLQRL
CTATEQLNLQVDGGVECLVEIRSIVSESDVSSFEIQHSGFMKQLLLYLTSKGEKDAVSRD
VRLKRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGN
GTGSSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLV
VRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAV
RQFSLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDSNKDCVGGKRGRAQTAP
TKTSPRNAKKHDELWHDGICPFVSNPLEVYLISSAPESITFEDPSVDVVILLRVLHAISR
YWYYLYDNASCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKSCPFFFP
FDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAE
SVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGS
QEGTKYIHNIQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFY
KWMLRQETSLTSHDLFNIDPVVAKSVYHLEEIVRQKRRLEQDKSQTKESLQYALETLTMN
GCSVEDLGLDFTLPGFPNIELKKGGKDISVTIHNLEEYLRLVIFWALNEGVSRQFDSFRD
GFESVFPLSHLQYFYPEELDQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKFLFEIL
SSFDSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTETPDDFLPSVMTCVNYL
KLPDYSSIEIMREKLLIAAKEGQQSFHLS
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacagtccaggggggtcactgcgacgttctcaaaggaacact
gtcggggcccaatcacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacgtagcccttctgaaagtagaaaatctatatcaaaggcacccaaagtgcag
tccaatactactactgaacagtccaaaggacacttttctaaaagaggctgtagctcatct
gctattataattccacaacaagaggctctggacacagacagtactttagagcaacaaaaa
tccgggcaggtgtctaaaagagacagttctcgaggagtgaaacgcagtgctagcccagat
tacaaccagacaaattctcctagccctgccaaaaaaaccaaagcacttcagcacgctgat
tcttcttcggacttggaaagaaataaatctcagactaagtctaagaaaagacatttgcac
caagagcaagagtcaaagtcttcacaattgccatcaaccagtaaagctcacaccagaaag
ggtggagctaccgttagctccagaaaccagaaacggaaaaggacagaaaccttacctatt
gtaaagagtcgttcagcaactgaaccaactggcagtgaagagagaccagcaaaacccacc
aagctggcttcaaaatcagtgagctcagccaaagctgggtgcagtaccatcacagattcc
tcctcttcggcctctacatcttcctcctcctccgttgttgcttctgcatcttctgctgtt
tctcagggtgctagagtcaaacagggaaaagaccagagcaaggccaggcgctccagatct
gcatccagccccagcccacggaggagtagcagggataaagaacaaaataaaataggcggc
tcttcaaagtttgattgggcagctcgttttagccccaaggttagcttgcctaaaacaaaa
ctttctctaccgggctcttctaagccagaggcatcaaaacctgggccttcaggattacag
gctaaactagcaagcttgagaaaatctacaaaaaagcgcagtgaatcaccacctgctgag
ctccccagtttgaggcggagcacacggcaaaagaccacgggctcctgtgctagtaccagt
cggcgaggctctggcctgggcaaaagaggagcagctgaggctcgccgacaggagaaaatg
gccgatcctgataacaatcaggatggtgttgattcttcagctgcacgagctgatgaggct
ccacaaggagctgcagcttctagttcggttgctggagctgtgggcatgacgacctctggt
gaaagtgaatcagatgattctgagatgggaagattacaagctttgttagaagctagagga
ctccctccacatctgtttggtcctcttggtcctcgaatgtctcagctattccaccgaaca
attggaagtggagctagttctaaagctcagcaacttctacaagggcttcaggccactgat
gaaagccagcagttacagtcggtgatagaaatgtgccagttattggtcatgggcaatgaa
gaaactttaggaggttttccagtcaagagtgttgttccagctctgataactttgctacag
atggagcacaactttgacattatgaatcatgcttgtcgagccttaacctacatgatggaa
gcacttcccaggtcatctgcagttgtggtggatgcaattcctgtttttttggagaagctt
caagttattcagtgtattgatgtggcagagcaagcattaactgccttggagatgttatca
cgcagacacagtaaagctattttgcaggcaggaggcttagcagactgtttgctgtacctg
gagtttttcagcataaatgctcagaggaatgcattagctattgctgccaattgctgccag
agcatcactcctgatgagtttcactttgttgcagattctcttccattgcttacccaaagg
ctaacccaccaggataaaaagtcagtagaaagcacttgcctttgttttgcacgtttggtg
gacaacttccaacatgaagagaatttactgcagcaggttgcttctaaggatttgcttaca
aatattcaacaactcctagtagtgactcctccaattttgagctcagggatgttcatcatg
gtggtgcgcatgttttccctaatgtgttccaactgtcctatgctagcagttcagcttatg
aagcaaaatattgcagaaactcttcactttcttctttgtggagcctcaaatgggagttgt
caggaacaaattgatcttgttccaagaagtcctcaagaactgtatgaacttacttcactt
atctgtgaattgatgccatgcttacccaaagaaggaatttttgctgttgacactatgcta
aagaaaggaaatgcgcaaaacacagatggtgcaatatggcagtggcgagatgacaggggt
ctctggcatccctataacagaattgatagccggataattgaggcagctcatcaggttggt
gaagatgaaataagtctgtctacattggggcgtgtttatacaattgactttaattctatg
cagcagatcaatgaggatactggaacagcacgtgccattcagagaaaacccaatcctcta
gccaatgccagtactagcggacatccagaatcaaagaaagatgatgctcgagcacagcta
atgaaagaagatccagatctagctaaatcttttattaaaaccttatttggtgttctctat
gaagtgtatagttcttcagctggacctgctgttagacacaagtgccttagagcaattctt
agaataatttattttgctgatgctgaacttctgaaggatgtactgaaaaatcatgctgtg
tcaagtcatattgcttctatgctgtcaagtcaagatcttaagatagttgttggagccctt
cagatggcagaaattttaatgcaaaaattatctgacatttttagtgtttacttcaggaga
gaaggagttatgcaccaggtgaaaaatttagcagaatcagaggctttactgacaagtccc
cccaaggcttgcactaatggctcaggaacacttagtgctactacaacagtaagcactgga
acagccactactgctagcaatgctgcttcagacttaggttctccaagtttacagcatagc
agggaagactctttggacctgagtccacagggccgattaagtgatgttttgaagagaaaa
agattgccaaaacgtggaccccgaaggccaaaatattcacctcccagagatgaggacaaa
gtagacaatcaagcaaaaagccctactgctacacagtctcccaaatcttccttcttggca
agtttgaatcctaaaacatggggaagattaagtacacagtcgaacagcaacaacattgaa
ccagcacgtacagctggtgtgagtggcctggcaagagctgcatcaaaagatacaatatcg
aacaacagagagaaaattaagggttgggttaaagagcaggctcacaaatttgtggaacgt
tattttagttcggagaatatggatggaagtaaccctgcactaaacgtgttacagagactt
tgcactgcaactgaacaactcaaccttcaggtggatggtggagttgagtgccttgtagaa
atccgtagtatagtctctgagtctgatgtctcttcatttgagatccagcacagtgggttt
atgaagcagttgctgctttacttgacgtcaaagggtgaaaaagatgctgtaagcagagat
gtcagattgaaaaggttccttcatgtgtttttctcttctcctcttcctggagaagaaccc
cttggaagattggaacctttagaaaatgcgcctttgttagcattggtccataaaatgaat
aattgtcttagtcagatggagcaatttccagttaaagtccatgattttccaagtggaaat
ggaacggggagcagtttttctcttaacagaggatcacaagctttaaaatttttcaacaca
catcagttaaaatgccagctgcaaagacatccagattgtgctaatgtgaaacagtggaaa
ggaggaccagtgaagatagatcctctagcgttggtacaagccattgaaagatatcttgta
gttagaggttatggcagagtgagagaagatgatgaagatagtgatgatgatggatcagat
gaggaaatagatgaatctctggctgctcagttcctaaattcagggaatgtgaggcaccgg
cttcaattctatattggagatcatctcctgccatacaacatgacagtttatcaagcagtt
agacaatttagtttgcaagctgaagaagagagggagtctacagatgatgaaagcaaccca
ttgggaagagctggcatatggaccaaaactcataccatttggtacaagccagtacgagaa
gatgaagatagtaataaagattgtgttggtggtaaaagaggaagagcacaaactgctcct
acgaaaacatctcccagaaatgcaaaaaaacatgatgaattgtggcatgatggtatatgt
ccttttgtctcaaatcctttggaagtttatctgatatcttccgctcctgaaagtataact
tttgaagatccttcagtagatgttgttattcttttaagagttttacatgccatcagtcgc
tattggtattatctatatgataatgcaagctgtaaagaaattattccaacatctgaattt
atcaacagtaagctaacagcgaaagctaacagacagcttcaagatcctttggtaataatg
acaggaaacataccgacatggctgacagagctaggaaaatcatgtccttttttctttcca
tttgacactcggcaaatgctgttttatgtaactgcatttgatcgtgatcgagccatgcag
agactgctggatactaatccagaaatcaatcagtctgattctcaggatagcagagtagca
ccccgtctggatcggaaaaagcgcacagtgaatagagaggaattgttaaaacaagcagaa
tcggtgatgcaagatctgggcagttcaagagctatgttggaaatccagtatgaaaatgaa
gttggcacaggtttaggccccacactggagttttatgcacttgtatctcaggaattacaa
cgggcagacttgggcctatggagaggtgaagaagttactcttgccaatcctaaaggaagc
caagaagggaccaaatatattcataatattcaaggtctgtttgcacttccatttggcaga
actgctaagcctgcccatattgctaaagttaaaatgaagttccgttttctgggaaaatta
atggcaaaagcaatcatggattttagactggttgaccttccacttggccttcccttttac
aaatggatgctgcgacaggaaacatctctaacatctcatgacttgtttaatattgaccct
gtagtagccaaatctgtgtatcatcttgaagaaattgtgagacagaagagaagacttgaa
caagacaaatcacagaccaaagaaagtctacaatatgcactggagacccttacaatgaat
ggctgttcagttgaagatctaggattggatttcacattgccagggtttccaaatatagaa
ctgaaaaaaggaggaaaagacatatctgtaactattcataatttggaagaatatctcaga
ctagttatattttgggcactaaatgaaggtgtttctagacaatttgactcattcagagat
ggatttgaatctgtctttccccttagtcatcttcagtacttctatcctgaggagctggac
cagttgctgtgtggtagcaaaacagacacttgggatgcaaagacactaatggaatgttgc
aggccagatcatggatatacacatgacagtcgtgccgtgaaattcctgtttgaaattctt
agtagttttgatagtgaacagcagagattatttcttcaatttgtgactggtagccctaga
ctgccagtaggaggctttcgaagtttgaatcctccccttacgattgtacggaagacattt
gaatccacagaaactccagatgacttcttaccctcagtaatgacctgtgtaaactatctc
aagttgccagactattcaagtattgagataatgcgtgaaaaacttttgatagctgcaaaa
gaagggcagcagtcattccacctttcctga
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integrated database retrieval system
