Notechis scutatus (mainland tiger snake): 113410058
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Entry
113410058 CDS
T09026
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03013
Nucleocytoplasmic transport
nss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113410058 (PNN)
03015 mRNA surveillance pathway
113410058 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113410058 (PNN)
03041 Spliceosome [BR:
nss03041
]
113410058 (PNN)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113410058 (PNN)
Spliceosome [BR:
nss03041
]
Complex C
Other components
EJC/TREX
113410058 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
113410058
NCBI-ProteinID:
XP_026520246
Ensembl:
ENSNSUG00000003138
UniProt:
A0A6J1TPI6
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPAQGRLLAIAGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGSTNRLAGERRTRRESRHESDAEDDDVKKPALQSSVVATS
KERTRRDLIQDQTMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKMFDDSQKKLNGLFENRRTEFAEQINKMEARPRRQSVKEKEHQEAQK
EEKKEDQNKEQEEGKVVQQVEEMETGNKSNDIEMEEVREEKEVGASHSDGEIEQEEEEQK
EEMEIKVEEEVEVKENDRQTDNQIEEVELVKGESEGIQPIDGEQDIMEINETDCTEPLEN
EISTEVEPEMECNAQSEQEGPTVALEKEEPSKPEVDAEPEESEEKEPESILISEAEVQPQ
SESVIWPQPLPLLESTQDQTPQLDKESLVSDKLPEMQADQVQAVSVEVKNKVRSRSRGRA
RNKTSKSRSRSTSSSTSSTSSTSSSSGSSSSSGTSSSRSSSSSSSSSGTSSRESTSSSSS
SESRSRSRGRGHNRDRKHRRSLERKRRDNSGVDRSHKSSKGSRRDAKGSKDKSSRSDRKR
SISESSWSGKRTSRNERDRKSDRKDKRR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagctgtgcgggctctacaggagcagctggagaaggccaaggaaagcctcaag
cacgtcgatgagaatatccggaaactgacggggcgggaccccaacgatgtgcggccggct
caagggagactgttggccatcgcaggccctggtggaggtagggggcgcggaagcctatta
ctgaggcgtggattctcggatagcggaggaggacccccagccaaacagagggatctagaa
gggtcgacgaatagattggctggtgaacgtcggacaaggagagaatcacgccatgaaagc
gacgcagaggatgacgatgttaaaaagccagcgttgcagtcctctgttgttgctacctcc
aaagagcgaacacgccgagaccttattcaagatcaaactatggatgaaaaagggaaacaa
aggaatcggcgtatatttggcctgttgatgggtactcttcagaagtttaaacaagagtcg
acagttgctactgagaggcaaaaaagaagacaagaaattgagcagaaacttgaagtgcag
gcagaagaagaaagaaagcaggttgaaaacgaaagacgagaactctttgaggaaagacgt
gctaaacaaacagaactacgactattggaacaaaaagttgaacttgctcagttgcaagaa
gaatggaatgaacataatgccaaaataattaaatatataagaacgaagacaaaacctcat
ctgttctatatacctggcagaatgtgccctgctacccagaagatgtttgatgattcccaa
aaaaagttaaatggactgtttgaaaatagacgtactgaatttgctgagcaaattaataaa
atggaagccaggcccagacgacagtctgtgaaggaaaaagaacaccaggaggcacagaaa
gaagaaaagaaggaagaccagaacaaggagcaggaagagggtaaggtggtacagcaggtg
gaggagatggagacaggtaataagagcaatgatatagaaatggaagaggtaagggaagaa
aaggaggtaggtgctagtcatagtgatggggagatagaacaggaagaggaagagcaaaaa
gaggaaatggaaattaaagtagaagaggaagttgaagttaaagagaatgacagacagaca
gataaccagattgaggaagttgagctagtgaaaggagaaagtgaaggtattcagccaata
gatggtgagcaggatataatggaaattaatgagacagattgtacggagccattagaaaat
gaaattagcacagaagttgaaccagaaatggaatgtaatgcacagtcagaacaggaaggg
cctacggttgccctggaaaaagaggaacccagcaagccagaagttgatgctgagccagag
gagtcagaagagaaggagcctgaatccattctgatatcagaggctgaggtccagcctcag
tcagagtctgtgatttggccacagcctttgccacttttggaatccactcaagaccaaacg
ccacaattagacaaagaatctctagtgtctgataagctgcctgaaatgcaggcagatcaa
gtccaggcagtaagtgtagaagttaaaaacaaagttaggagcagaagcagaggtagagca
agaaacaaaaccagtaagagtcgaagtcgaagtactagtagtagcactagtagtactagt
tctacaagtagtagcagcgggagcagttctagcagtggtacaagcagcagtcggagcagt
tccagcagcagcagtagcagtggtactagtagtcgagaaagtactagtagttcaagtagc
agtgagagtagaagtcgaagcagggggcgaggacataatagagatagaaagcatagaagg
agtttggaacggaagcgaagggacaattcaggagtagatagaagtcacaagtcttcaaaa
ggtagcagaagagatgcaaaaggatcaaaggataaaagttcaaggtcggacagaaaaagg
tctatatcagaaagtagttggtcaggcaaaaggacttcacggaatgaaagagaccgtaaa
tcagacaggaaagacaaaaggcgttaa
DBGET
integrated database retrieval system
