Notechis scutatus (mainland tiger snake): 113410141
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Entry
113410141 CDS
T09026
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04140
Autophagy - animal
nss04142
Lysosome biogenesis
nss04145
Phagocytosis
nss04148
Efferocytosis
nss05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
113410141 (VPS18)
04142 Lysosome biogenesis
113410141 (VPS18)
04140 Autophagy - animal
113410141 (VPS18)
04148 Efferocytosis
113410141 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113410141 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nss04131
]
113410141 (VPS18)
Membrane trafficking [BR:
nss04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113410141 (VPS18)
Hops complex
113410141 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
zf-RING_5
zf-RING_UBOX
zf-RING_11
zf-RING_2
aq_1631
zf_RING_Vps8
zf-rbx1
zf-ANAPC11
DUF5600
PPR_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
113410141
NCBI-ProteinID:
XP_026520371
Ensembl:
ENSNSUG00000007801
UniProt:
A0A6J1TPW9
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MATILDEYVASLSHSTSSQQNRVNLGIPHTGYVNARLEKETPIFNKQRIDFTPPKKINSM
VVSFNQLCMSLGKDIIFRLDVAKADEPNQVELGRKDEASVHKLFLDQTGSHLIIALNSSE
CLYLNRSTQKIRLLSRWKGHLIESVGWNKIFGTEINTGPILVGTSQGQIYEAEISVTEGS
LFSTNPDQYFRLIYTLEEEAGPAPVCCLEIERGVDGKWFIIATTHKRLFQFVGKIPEGSE
PQAFGTIFSMPEDHLPGFREFPASLGYSEIAFYTPKLRSSPSAFAWMMGNGVLYGSLDYG
RPDSVLSDEQVWEYPSDVDTLANKPISIVLTQFHFLLLFPDRVKAVCTLNGQVVFQDVFL
EKFGSLKRMIKDPAFGQIWIHTEKVVFRYNVQRESRDVWKMYMNINKFDLAKEYCKDRPE
CLDIVLAKEAEYCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLASL
KQSETTQITLLTTWLTELYLNRLGVLEGDGSKQDLYGKTKENFRSFLSSPKIKDSLRNNR
STIHELLASHGDTDHMVYFAVIMNDYERVIAHYCQHENYNEALKVLSRIKNEELFYKFSP
ILIQHMPKKVVDAWIEMGKDLDAKRLIPALVTYSQSGGTQQINEAIRYMEFCVNELEETQ
EAIHNYLLSLYALCRPDSLLSYLEHAGTFADSIHYDLKYALRLCAEHSHHRACVHVYKVM
EMYEEAVDLALQVDVDMAKSCADLPEEDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
NLLKIEDVLPFFPDFVTIDHFKEAICNSLEAYNKHIEELKTEMEEATQSAERIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVYPNLPAYKQAKLEDLQK
KMLAASQPSKSHHRHKDTADTLGQGKGQPSREQTKADIDDIVAAECVYCGDLMIRSIDKP
FIDPERYQEEMQSWL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggctaccattctggatgagtacgtggcctcgctttcccactccacctcctcgcagcag
aatcgtgtgaacctgggcatcccgcacacgggatatgtaaatgctcgcctggaaaaagaa
acaccaatttttaacaaacagagaattgacttcacacctcccaagaagattaatagtatg
gttgtctcatttaaccaactgtgtatgagtcttggaaaagacataatatttagacttgat
gtagccaaggctgatgagcccaatcaggttgaacttggacgaaaagatgaagccagtgtt
cataagcttttcttggaccagacaggttctcatcttatcattgccctgaatagcagtgag
tgtctctacttgaacagaagtactcaaaagatacggcttctttcccgctggaaaggtcat
ttgattgaaagtgtgggttggaataaaatttttggtacagagataaacacaggccccatt
ttggttggaacatcacaaggccaaatatacgaggctgagatttctgtcactgaaggaagt
ctctttagtactaatcctgatcaatatttccgcctgatttataccttggaggaggaagct
ggtcctgccccagtctgttgccttgaaatagaacgaggagtggatgggaaatggtttatc
attgccaccactcacaagaggcttttccagtttgttggcaagattccggaagggtcagag
cctcaagcctttggcaccatatttagcatgcctgaagatcatttgcctggatttcgagag
tttccggctagtcttggctacagtgaaattgcattctacactcccaagcttcgttcttcg
cccagcgcttttgcttggatgatgggaaatggggtcttgtatggctctctggattacggg
cgtcctgattctgttctgagtgatgagcaagtgtgggaatatccttctgatgtagacaca
ctagccaataaacccatctccatagtgctcactcagtttcattttctgctgctttttcct
gatagagtgaaggctgtgtgcactttgaatgggcaagttgtcttccaggacgtattctta
gaaaagtttggctcactgaagcgtatgatcaaagatcctgcatttggacaaatctggatt
cacaccgagaaagttgtgtttcggtataacgttcagcgagaatcccgtgatgtgtggaag
atgtatatgaatatcaacaagtttgatttggctaaagagtactgtaaagaccgcccagag
tgcctagatattgtgctggcaaaagaagcagaatactgtttccaaaacaagagatatctg
gatagtgcaaagtgttatgcactgacccaaaattactttgaggagattgcccttaagttt
attgaagctaaacaggaagaggcactgatggaatttttgataaagaaactagctagcttg
aagcagtctgaaacaacacaaataactctgctgaccacctggttaactgaactatattta
aatcgcttgggggtgctggaaggagatgggtcaaagcaagacctctatggtaagaccaag
gagaacttccggagttttttgagtagccccaaaatcaaagactccctccgcaataatcga
tcaactattcatgaactgttggcaagtcatggggacacagaccacatggtatactttgct
gtcataatgaatgattatgagcgagtgatagcccattactgtcaacatgaaaattataac
gaagcattaaaagtcctatccaggatcaagaatgaggaactcttttacaagttttctccc
attttgatccagcatatgcccaagaaagtggtagatgcttggattgaaatgggcaaggac
ttggatgccaagaggctaattcctgctcttgtcacctacagtcagagtgggggtactcag
cagatcaatgaagccattcgatacatggaattctgtgtgaatgagctggaagaaactcag
gaggccattcacaactatttgttgtcactctatgctttgtgtcggcctgactcattactg
tcctacttggaacatgctggaacctttgctgacagtatccattatgacctgaagtatgca
cttaggctttgtgccgaacatagccaccaccgagcttgtgttcatgtttataaagttatg
gagatgtatgaagaagctgttgatctagctttgcaggtggatgtagatatggcaaaatcc
tgtgcagatcttcctgaagaggatgaggagttgagaaaaaagctgtggctaaagattgct
cgtcatgttgtacaagaggagaaggatgtcaaaaaggccatggcttgcctctctagttgc
aatctgctgaagattgaagatgtgttgcctttcttcccagactttgtcaccatcgatcac
ttcaaggaagctatctgcaactctctagaggcctataacaagcacatagaggagctgaag
acagagatggaggaagccacgcaaagtgctgaaaggatcagggaggacattcaggagatg
agaaacaaatatggctctgttgaaccacaagaaaaatgtgcagcttgtgattttccactt
ctaaaccgtcctttttacctgttcctttgtggccacatgtttcactatgactgccttcta
caggcagtttacccaaacctgcctgcctataagcaagctaagctggaagaccttcaaaag
aagatgctggctgcaagccagccttccaaatcccatcaccgccataaggatacagcagat
actcttggtcaaggaaaaggtcagccaagccgagaacagacaaaagctgacatagatgat
attgtggcagctgaatgtgtatattgtggtgacttaatgatccgatccattgataagcct
ttcattgatccagagagatatcaagaagagatgcagagctggttgtag
DBGET
integrated database retrieval system
