Notechis scutatus (mainland tiger snake): 113410222
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Entry
113410222 CDS
T09026
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04510
Focal adhesion
nss04512
ECM-receptor interaction
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113410222 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113410222 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113410222 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nss04147
]
113410222 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
nss00536
]
113410222 (COL4A3)
Exosome [BR:
nss04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113410222 (COL4A3)
Glycosaminoglycan binding proteins [BR:
nss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113410222 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113410222
NCBI-ProteinID:
XP_026520455
UniProt:
A0A6J1TR51
LinkDB
All DBs
Position
Unknown
AA seq
1603 aa
AA seq
DB search
MIEAFFGFSALNCICNSKNQCFCDGIKGSKGEKGFPGYPGLPGQMGFQGPEGPPGPQGPK
GFSGPVGPAGAKGSRGKPGVPGYSGPPGLPGEPGNAGPHGSPGIPGCNGTKGDPGFPGLL
GQGGLPGLPGPKGIKGEKGTSENGFSKGYSSSKGNPGFPGVPGSQGKPGLQGLPGTIGPQ
GPSGFPGTAGRAGPPGPKGIMGINVIGSKGIKGDCGLIGPPGPSGTVIITLTGAENTTEL
KGDKGDQGSPGYPGPPGEPGLHGDSHTIKGDPGDPGHQGRAGKNGAPGSPGPRGEQGEKG
LLGLPGKVGTKGIKGEVGPMGNKGLTEYYDGIPGAKGNKGLLGFPGRKGQRGPIGLQGPL
GAIGSPGISRPGLGGVPGSPGLKGKKGERGQPGINAIGPQGHPGFPGLPGPVGSVGPLGQ
PGTITFEKGPQGTPGSPGCIGPPGLLGDDGEKGEESGPCTECTYIIGQPGLGGIAGEEGQ
QGRKGVEGILGPKGFSGSPGHPGPPGDQGFTGLPGNKGVKGSKGDANLMHPEGPKGDNGE
PGIRGKTGEKGLDGIPGKPGQKGKKGSAGIRGSDGPKGDRGLPGSVGSPGLRGKIGLTGP
PGYGPQGKNGSKGSEGNPGLPGLPGVSGTKGDPARVKAVPGAPGLQGPEGTPGLQGRRGN
MGSRGQRGDSGLPGKDGDPGLAKNGFPGCSGQKGDKGAQGPKGIPGCLGKAGKPGLPGKP
GVPGEKGEPGPVIPGQHGSLGLPGEEGKLGEKGERGSSGLPGPAGQKGFEGADGPKGEIG
GPGAPGEKGLPGKTGQCLIGLPGTPGRCGVMGPQGSRGTIGAKGDPGIPGLDIPGFPGRF
GLPGSQGPGGNKGLPGVKGQCGKPGKPGTPGFRGERGLMGDVGSPGLPGVSGNPGIPGGR
GSPGFPGSKGRKGSFGEKGEPGDKGPPGLSESKKIYGDKGERGSKGAPGRTGLKGEKGQQ
GVQGCVGPVGLPGTLQPPGAKGAKGLPGLPGIYGLPGVPGDRGDMGMAGSKGQQGSSGVP
GLPGIAGPPGFPGIQGDKGEPKPGTGPPGNPGPKGNPGLLGERGRKGTRGSPGHPGLIGE
PGLPGNRGNTGLPGITGQPGPVGSNGIKGSKGLPGQNGVQGHPGPVGLPGESGLVGEKGN
QGHDGTDGSPGETGAQGSSGQQIPGPKGLPGPKGIKGEMGVAGFPGQGFKGVMGDQGPGG
PPGLPGPPGLPGKPGKILSPKGNRGPPGPDGNPGDPGSPGPAGVPGYSMKGNKGVRGTDG
ITGLPGMKGDDGPCGMPGIEGIPGYQGPDGDLGFPGLPGIKGEKGNRGPPGPTGKSGPRG
PIGLPGQPGPFVKAVSFPGGPGPAGPPGNPGSSGDPGPRGSPGLPGPPGTVGQPGRHGTP
GRTGPPGPKGEKGFQGQKGLPGLLGSPGTNGLPGFPGSSITSPVKRGFIFSRHSQSTNIP
TCPSGTTHIYSGYSLLFVQGNEQAHGQDLGTSGSCLSRFTTMPFLLCNTQSVCRFASRND
YSYWLSTETPMPEDMAPISGRDLESYISRCVVCEGPAMMIAVHSQKTSVPSCPQGWQSLW
KGFSFVMCCGRKVQPILGPLFKEFEELEQVERSGAKKLNPKRD
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggctttttttggcttttctgcattgaactgcatctgcaacagcaaaaaccaa
tgcttttgtgatggaataaaaggcagtaagggagaaaagggctttcctggttaccctggt
ctacctggtcagatgggcttccagggtccagagggtcctcctggaccacaaggacctaag
ggtttttcggggccagtaggtcctgctggagctaaaggttcaaggggtaagccaggagtt
cctggttactctggtcctccaggtcttccgggtgaacctggaaatgctggtcctcatgga
tctccaggtataccaggatgcaatggaacaaagggtgatccaggttttccaggactctta
ggacaggggggacttccaggattaccaggtcctaagggcatcaaaggagaaaagggaact
tctgaaaatggattcagtaaaggttacagttcttccaaaggtaatcctggatttccagga
gtgcctggatctcagggtaagccaggccttcaaggattacctgggacaattggaccacaa
ggcccttccggttttccaggcacagcaggaagagcaggacctccagggcccaagggtatc
atgggtattaatgttattggatccaaaggaataaagggtgattgtggactaataggtcct
cctggaccatctggaactgttattataacattaactggagcagaaaatacaacggaatta
aaaggagataaaggagatcaaggttctccaggatatcccggacccccaggagaaccgggt
ttacatggtgattcccatactataaaaggagatcctggagaccctggtcatcagggcagg
gcaggaaagaatggtgctcctggctcacctggtccacggggagaacaaggtgaaaagggt
ttgctaggattgcctggaaaagttggaactaaggggataaaaggtgaagttggccctatg
ggaaacaaaggtctaactgagtattatgatggaatacctggagcaaaaggaaataagggc
ctcttaggatttccaggacgtaaaggtcagcgtggaccaatagggctacagggtcctttg
ggtgccattggaagtccaggtatttcaagacctggtttaggaggtgtgccaggttctcca
ggcctcaaaggaaagaaaggagagagaggacaaccaggaatcaatgctattggaccacaa
ggacatcctggatttccaggcctaccaggcccagtaggatcagtaggtcctttaggacaa
ccaggtacaataacttttgaaaaaggtccacaaggaactcctggaagcccaggatgtata
ggtcctccaggcctattaggagatgatggagaaaaaggtgaagaatcaggcccatgtacc
gaatgtacttatattattggacaacctggccttggcggtattgctggagaagagggtcag
cagggtaggaaaggtgtggaaggaatacttggtcctaaaggattctcaggatctcctggg
catccagggcctcctggagatcaaggatttacaggccttccaggaaacaaaggtgttaaa
ggatcaaaaggagatgcaaacttaatgcatccagaaggtcccaaaggagataatggagaa
ccgggaatcagaggaaaaacaggagaaaaaggtttggatggaatacctgggaaacctgga
caaaaaggcaaaaaaggttctgctggaatacggggatcagatggtccaaaaggcgacagg
ggattaccaggatctgttggcagcccaggtcttcgtggtaagatagggttaactggacca
ccaggatatggaccccaaggaaagaatggttcaaaaggatctgaaggaaatcctggattg
cctgggttaccaggtgtatctggtactaaaggggaccctgctagagtaaaggcagttcct
ggagcaccagggcttcaagggccagaaggtacacctggactacaaggaagaagaggtaac
atgggatccagaggacaaaggggtgactcaggtcttcctggaaaagatggagatccaggc
ttagcaaagaatggatttcctggttgttctggtcagaaaggggataaaggagctcaagga
cctaaaggaatacctggttgtctaggaaaagcagggaaacctggcttacctggaaaacct
ggagtgccaggagaaaagggtgaaccaggtccagttattcctggacagcatggaagtctt
ggcttaccaggagaagagggaaagttgggtgaaaagggtgaaagaggatcatcaggttta
cctggacctgcaggtcaaaaaggttttgaaggagctgatggaccaaaaggggagattgga
ggtcctggagctccaggagaaaaaggtcttccaggaaaaactggccagtgtctcattggt
ttaccaggaacaccaggtcgatgtggagtaatgggaccacaaggtagcagaggaacaata
ggggccaaaggagatccaggtattccaggattagatatcccaggatttccaggacgattt
ggacttcctggatcacaaggccctggaggaaataaaggattgcctggcgtcaaaggacag
tgtggtaagccaggaaagccaggcacaccaggtttcagaggagaaagaggtttgatggga
gacgtgggtagccctggattgcctggtgtctctggaaatccaggaatccctggaggcaga
ggttctccaggctttccaggatcaaaaggaaggaaaggatcttttggagaaaaaggtgaa
ccaggtgataaaggtcctcctgggctatcagaatccaaaaagatctatggagataaagga
gagagaggaagtaaaggagctcctggaagaacaggactcaagggagaaaagggtcaacaa
ggtgtgcaaggatgtgtgggtcctgttggactaccaggtactctacagccaccaggagct
aaaggagctaaaggacttccaggacttcctggaatctatggattgccaggagttccagga
gacagaggggacatgggaatggcaggttcaaaagggcagcaaggttcttcaggtgtgcct
ggattaccaggtatagcaggcccccctggatttcctggtattcaaggggataaaggagaa
cctaaacctggcactgggcctccaggaaacccaggacctaagggtaatccaggtcttctt
ggagagaggggaagaaaagggacacgtggatcaccaggccacccaggtcttattggagaa
cctggactacctggaaacagaggcaatactggtttaccaggaattacaggacaaccagga
cctgtaggcagtaatggtattaaaggtagcaaaggactgccaggacaaaacggtgttcaa
ggacatccaggtccagttggattgcctggtgaaagtggattagttggtgaaaagggtaat
caaggacatgatggtactgatggttcacctggagaaacgggagcacaaggttcgtcaggg
caacaaattcctggccctaaaggacttcctggaccgaaaggtatcaaaggagaaatggga
gtagctggttttccaggacaaggctttaaaggtgttatgggagaccaaggacctggtgga
cctcctggtttacctggaccaccaggacttccaggaaaaccaggcaaaatacttagcccc
aaaggaaatagaggtcctcctggcccagatggaaatccaggtgatcctggtagcccagga
cctgctggagtcccaggctacagtatgaaaggaaacaaaggtgtcagaggaacagatgga
attacaggcctgccaggaatgaaaggtgatgatggcccatgtggtatgccaggaattgaa
ggtatccctggttatcagggtcctgatggtgatcttggctttccaggattaccaggaata
aaaggagaaaagggcaatcggggaccacctggaccaaccggaaaatcagggcctcgaggg
ccaataggactaccaggtcagcctgggccatttgtgaaagcagtttctttcccaggaggt
ccaggacctgctggacctccaggaaacccaggaagctcaggagatcctggtccccgtggg
tcacctggcctcccaggacctcctggtacagtgggccagccaggccgtcatggtactcca
ggtagaactggaccacctggacccaaaggagaaaaaggatttcaagggcaaaaaggttta
cctggattgcttggatctcctggtacaaacggacttcctggattcccaggaagctccata
actagtccagtgaaaagaggattcattttttccaggcacagtcagtcaacaaacattcct
acatgtccatctgggacaactcacatctatagtggctactctcttctttttgttcaagga
aatgaacaagcacacggacaagaccttggtacatctggcagctgtctttcaagatttact
actatgccctttttattatgtaatacccaatcagtctgcagatttgcttctcgcaatgat
tactcctactggttgtcaacagaaacaccaatgcctgaagatatggcaccaatttctgga
agagatttagagtcctatattagcagatgtgttgtctgcgaaggtccagcaatgatgata
gcagtccacagtcaaaaaacttcagttccatcctgtcctcaaggctggcaatctctttgg
aaagggttttcttttgttatgtgctgtgggagaaaagtgcaacctattctggggcctctg
tttaaagaatttgaggaactggagcaggttgagagatcgggggctaaaaaacttaatcct
aagagagattga
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