Notechis scutatus (mainland tiger snake): 113410302
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Entry
113410302 CDS
T09026
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113410302 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nss03021
]
113410302 (TAF5)
03036 Chromosome and associated proteins [BR:
nss03036
]
113410302 (TAF5)
Transcription machinery [BR:
nss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113410302 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
113410302 (TAF5)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113410302 (TAF5)
STAGA complex
113410302 (TAF5)
TFTC complex
113410302 (TAF5)
SAGA complex
113410302 (TAF5)
SLIK complex
113410302 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_SPT8
Beta-prop_Nup120_160
eIF2A
CDK5RAP3
VPS8_N
RAB3GAP2_N
DUF4680
Motif
Other DBs
NCBI-GeneID:
113410302
NCBI-ProteinID:
XP_026520636
Ensembl:
ENSNSUG00000006297
UniProt:
A0A6J1TQN9
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MGSFFQEPLSCRWAGVPELSQKRGKAKGGGEAVGRANMAALPEEPTEAVAVKPDPDAGAP
PPAPPAPLSQSPISTAPAVATTVPPASASSVAATLLADGEPLAGGVDSKSSVTSSPTPPA
TQLPADKQTLLAVLQFLRRSNLRESEEILRREARGLVDDVPNDPNSSVPGIPGAHGGEGQ
DPSIGILAPGTGDVLINSVPFGQTGAPISPAAITTPPAAPLGHPGKAGVLVEDQPDVSAV
LSAYNQQGDPALYEEYYSGLKHFIECALDCHRAELSQLFYPLFVHMYLELVYNGHESEAK
SFFEKFHGDQECYYQDDLRVLSSLTKKEHMRGNETMLDFRTSKFVLRISRDSYQLLKRHL
QEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPE
IEVPLDDEDEEGENEEGKPKKKKPKKDNMGSKSKKQDPNAPPQNRIPLPELKDSDKLDKI
MNMKEATKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSMIVGGFADSTVRVWSVTP
KKLRSVKSATDLSVIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSC
SEDGTIRLWSLLTFSCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVSRLWATDHYQPLR
IFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPVNSLAFSPNG
RFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALKFSRDGEILASGSMDNTVKLWDAV
KAFEDLETDDFTTATGHINLPESSQDLLLGTYMTKSTPVIHLHFTRRNLLLAAGAYSSQ
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcttcttccaggagcctttaagttgtcgctgggcgggtgtgcccgaactgtcg
caaaaacgcgggaaagcaaaggggggaggtgaagccgttgggcgcgccaatatggctgct
ttgccggaggagccgacggaggcagtagcggtaaagccggatcctgatgcgggagcgccg
ccgcccgctcctcccgctcccctctcccagtccccgatctcgacggcgccagcagttgca
acaactgtccctcctgcgtctgcctcctcggtcgctgccacccttctcgcggatggggag
ccgcttgcgggaggagttgactcgaagagctcggtgacttccagccccacgccgccagcc
actcaactacccgccgacaagcagactctgctggcggtgctgcagttcttgcgccgcagc
aatctgcgcgaatcggaggagatccttcggagggaagcccgtggtctcgtcgacgacgtc
ccgaacgacccgaattcctccgttcccgggatccccggagctcatggaggggaaggacag
gatcccagtatagggatcttggctcctggaactggggatgtgctaatcaattctgtgccc
tttggccagactggagctccgatctctccagccgctattacgacacctcccgcagcgccc
ttgggccatcctgggaaagccggagttcttgtagaagatcagccagatgtgagcgcggtg
ctatctgcttataatcaacaaggagacccagcactttatgaagaatactatagtggattg
aaacacttcattgaatgtgctctggattgtcatcgagctgaattatcacaacttttttat
cctctttttgtacacatgtacctggaactagtctacaatggacatgaaagtgaagcaaaa
tcgttctttgaaaagtttcacggggaccaagaatgttattaccaagatgacttgcgtgta
ctatcaagtttaaccaagaaagagcatatgaggggcaatgagactatgttggatttccga
acaagcaagtttgtgttgcgtatttcccgtgactcttaccagctcctgaagagacatctt
caggaaaaacagaacaatcagatctggaacattgttcaagaacatctttacattgatatt
tttgatggaatgcctcgtagtaaacaacagattgatgctatggtgggaagtttagctgga
gaagccaaacgagaagcaaataaagcaaaggtattttttggcttattaaaagaaccagaa
attgaggtacctttggatgatgaagatgaagaaggagagaatgaagaggggaagccaaag
aaaaagaagccaaaaaaagataacatgggatcaaaaagtaaaaagcaggatccaaatgct
cctcctcagaatagaattcctcttcctgagctaaaggattctgataagctagataaaata
atgaatatgaaggaagctactaaacgtgttcgacttggtccagactgtttgccttctatt
tgcttctacacgtttcttaatgcatatcagggtcttacagctgtggatgttacagatgac
tctagcatgattgttggaggctttgctgattccactgtcagggtatggtctgtgacaccc
aaaaagcttcgcagtgtaaaatcagccacagatctcagtgtcatagataaagaatctgat
gatgttttagaaagaatcatggatgaaaaaacagcaagtgaattgaagattttatatggc
catagtggacctgtctacggtgctagctttagtcctgataggaactatttgctatcatgt
tcagaggatggcactatcagattgtggagtcttctaactttttcttgtttggtgggatac
aaaggacataattatcctgtatgggacacacagttctctccgtatggatattattttgta
tctggaggccacgacagagtgtctcgtttgtgggctacggatcactatcagcctttgcgg
atctttgctggtcatctggcagatgtcacatgtacacgttttcatccaaactccaactac
attgccacaggctcagcagacagaactgtgaggctttgggatgttctgaatggaaactgt
gtaagaatcttcacgggacataagggaccagttaattcattagcattttctcctaatgga
cggttcttggcaactggagcaactgatggaagagtgcttctgtgggatattggccatggt
ttaatggtaggagagctaaaaggacacacagacacaatttatgcactcaaattcagtaga
gatggagagatcttagcttcaggttcaatggacaatacagttaaactttgggatgctgtg
aaagcttttgaggacttggagacagatgattttacaacagccactggacacataaacctt
cctgaaagttcacaggacttgcttctaggcacatatatgactaaatcaactccagttata
cacctccactttactcgaagaaatttgcttcttgctgctggggcttatagttctcagtaa
DBGET
integrated database retrieval system
