Notechis scutatus (mainland tiger snake): 113410368
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Entry
113410368 CDS
T09026
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113410368 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nss03021
]
113410368 (TAF4)
03036 Chromosome and associated proteins [BR:
nss03036
]
113410368 (TAF4)
Transcription machinery [BR:
nss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113410368 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
113410368 (TAF4)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
113410368 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
113410368
NCBI-ProteinID:
XP_026520686
Ensembl:
ENSNSUG00000014148
UniProt:
A0A6J1TQU0
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MAAGSDLLDEVFLNAEVDEKVVSDLVGSLESQLAASGHHHPHHKAQEPLRIAGGLLGNHV
VSSGSSSSNSPSPSPGGGGGGGGVGGNANVQTESPGSRTTGSSSTSSTTTTVAAAAAAKM
GLSGPEITKPGTVGVQGSVINHNARSQGSTLDGATTTSSSTTTTVQGGSEAAITPGTLSQ
GKSVVISTMATALSTRNGKIGTTAVQTLNGSNVVMNSHASFSATPVTANPTVVPAVAPLV
NNGPGNIGKVNTVNAVLPSASNTVIQTSFLGPGVSSASSPSPTVISSQQPPNIGTGGPTV
ALVRPPIHTAGPSLAAATQNGSSTVINSTINVGGFPTAAVAAATVGSGVSLQTSLVNSQP
GSGVSAAAPTTQVIKAESPKTIVQAVTQQQTLAAAGQPSTTGGNMIIGQTMQAGLPNVAP
NPGGVPPAPPGTPTGLAKGAANTVAQSLPRTATATTSGIRATLTPTVLAPRLPQPSQNPT
NIQNFQLPPGMVIVRSESGQLLMIPQHALAQMQAQAHAQSQSQTTMTPRPATSTSASPVQ
LSTVQVSSLRNAPGTPIIARQVAPTTIIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGSPA
QTTALGTATAVQTGTPQRTVQGATATSTAATETMENVKKCKNFLSTLIKLASSGKQSTET
AANVKELVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRHLTPDSAAFIQ
QSQHQQPLTQPATTLMLGSSVQRTAGKTTATVTSTLQQPVISLTQPTQVGVGKQAQPTQV
VIQQSQKQGTLIRPPQVTLTQTPMVALRPPHNRIMLTAPQQIQLNALQTVPVVKQTVLPG
TKALSTLSTQAAIAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVG
TLTRSCKDETFLLSTPLQRRILEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKVSETA
QQRNISYKDDERYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQ
LRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRRKRKLDSPGSGSGTEGSSPSVAVPGC
SGIGSTRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgggtcggatctgctggatgaggttttcctaaacgctgaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtctcagctggcggcctcgggccaccaccac
ccgcaccataaggcgcaggagcccctcaggatcgccggggggctgctggggaaccatgtt
gtgagcagcggcagcagcagcagcaacagccctagccctagcccaggaggaggaggagga
ggaggaggagtaggaggcaatgctaatgtccaaacagagagccccggcagccgcaccacc
ggcagcagcagtaccagcagcaccaccaccaccgtcgccgccgccgccgccgccaagatg
ggactcagtggcccggagatcaccaagccaggaaccgttggagtgcaagggagtgttatc
aatcataatgccaggtcccagggttctacgttggatggggccactacaactagcagcagc
accactacaactgtccaaggtggctctgaagctgctattaccccagggaccctcagtcag
ggcaaatcagtggtaatcagtaccatggcaacagctttatctaccaggaatggtaaaatt
gggaccactgcagtgcagactttgaatggaagtaacgtggtgatgaattcgcacgcttct
ttctcggccactcctgtgacagcgaatcctactgtggtccctgctgttgcccctctcgtg
aacaatggacctggaaatattggaaaagtcaacaccgttaatgcagtcttgccatctgct
tcaaatactgttatccagacttctttccttggccctggagtatcctctgcctcttcacct
tcacctacggtgatctcgtcacaacagccccccaatatcgggaccggggggccaacagta
gcgttggtaaggccacccattcacacagccggaccctcattggctgccgccacccagaat
gggagcagtactgtgatcaattcaaccatcaatgtgggaggttttccgactgcggctgtt
gctgccgccacggttggttcaggggtgtctctccagacctctcttgtgaacagccagccg
ggatctggagtatcagctgctgcgcccaccacccaggtcatcaaagcggagtctcctaaa
actatcgtgcaagcggtcacccaacagcaaactctggctgcagctggccaacctagtact
acagggggtaatatgattattgggcaaactatgcaagctggcctgcccaacgtagctcct
aatcctggtggagtacctcctgcacctccaggtactcccactggtctggctaagggtgct
gccaatacagtggcgcagagcttgcccaggactgcaaccgcaaccacaagtggaatcaga
gcaactttgactcccactgttttagcacctcgtctgcctcagccttctcagaatccaaca
aatattcagaactttcagttgccaccaggcatggtcattgtacgtagtgagagtggccag
ctactgatgatccctcaacatgctttggcacaaatgcaggcccaagcccatgcacagtcc
cagtctcaaactaccatgactcctcgccctgccacatctaccagtgcttctccggtccag
ctctcgactgtgcaggtcagttccctgagaaatgcaccgggaactcctataattgctcgg
caggtagcaccaaccactataatcaaacaagtgtctcaggcacagacaactgtacaaccc
acaacaacgttacaaaggccgcctgtagtccagcctcagattgttctgggtagtcctgca
caaacaacggcattaggaactgcgactgctgtgcagactggaacccctcaaaggacggtg
caaggagccacagcaacctccactgcggccacagaaaccatggaaaatgtgaagaaatgc
aagaattttctctcaacgctaataaaactggcgtcttctggaaaacagtcgacagaaact
gcagctaatgtgaaagagctagtccagaacttgctggatggaaaaattgaagcagaagac
ttcaccagtaggttgtaccgggagcttaattcttcacctcaaccataccttgtgcctttc
ttgaagcggagcttgcctgccttgagacacctgactcccgactcagccgctttcattcag
caaagccagcatcagcagcccctgacgcagcccgccaccactctgatgttgggcagctcg
gtccagcgtacggcgggaaagaccactgccacggtcacgagtaccttgcagcagccggtc
atcagcctaacgcagccaacccaagtgggagttggcaagcaggcgcagcctacacaggtg
gttattcagcagtctcaaaaacaaggtacattaattaggcccccgcaggtgacgttgacc
cagacgcccatggtggctttgcggccaccccacaaccgtattatgctgactgctccccaa
caaattcaactgaatgcacttcagacagtccccgtggtaaagcaaacagtattaccagga
accaaagctctttctactctttcaacccaagctgcaattgctcaaaaaaataaactcaaa
gaacctgggggaggctcttttcgggatgacgatgatattaacgacgttgcctcgatggca
ggagtcaatctatcggaagagagcgcacgtatattggccaccaattctgaattggtgggc
actttaacaaggtcgtgtaaagacgaaacttttcttctctcaacacccttgcaaagaaga
atattagaaataggtaaaaagcatggaataacggaaatccatcctgacgtcgttagttac
gtatcgcatgcgacgcaacaaaggttacaaaacctggtggagaaagtatcagagaccgcc
cagcaaaggaatatttcttacaaggatgatgaaagatacgaacaggcaagcgacgtgcgg
gcacaactcaagttctttgaacaacttgatcaaatagaaaaacaacggaaagacgaacaa
gaaagggaaatattaatgcgcgcagcaaagtctcgatctagacaagaagatccggagcag
cttagattgaaacaaaaggccaaggagatgcaacaacaggaactagcacaaatgcgacag
agggatgctaacttgactgcattggctgcaataggacccagaaggaaaaggaaactggat
tctccagggtctggatcagggacagagggatccagtccgagtgtagcagtaccaggatgc
tccggaatcggatcaaccagacagtttacacggcaaaggataacgcgggtgaacctcagg
gacctgatattttgtttagaaaacgagcgagagacaagccattcattattgctctataaa
gcattccttaaatag
DBGET
integrated database retrieval system
