KEGG T09026: 113410457

Notechis scutatus (mainland tiger snake): 113410457

Entry

113410457         CDS       T09026

Symbol

SDC4

Name

(RefSeq) syndecan-4

K16338

syndecan 4

Organism

nss Notechis scutatus (mainland tiger snake)

Pathway

nss04512

ECM-receptor interaction

nss04514

Cell adhesion molecule (CAM) interaction

nss04820

Cytoskeleton in muscle cells

Brite

KEGG Orthology (KO) [BR:nss00001]
09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113410457 (SDC4)
   04514 Cell adhesion molecule (CAM) interaction
    113410457 (SDC4)
09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113410457 (SDC4)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:nss00535]
    113410457 (SDC4)
Proteoglycans [BR:nss00535]
Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   113410457 (SDC4)

SSDB

Motif

Pfam:

Syndecan

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

Unknown

AA seq 200 aa
MQVARLAGLYAALLLAVGVAAESVRETEIMDPKLNIEEFASGDLPDDEDARSDLTVDYND
GEEFSGSGDEQGYTDMEDKLVSATSSTMDSMDNSIPDSKKDSKDEIAPAVIDNEIIVPKK
SSPEGEDLSNKVSMASTANGSIFERTEVLAALIAGGAVGLLFAVFLILLLIYRMKKKDEG
SYDLGKKPIYKKAPTNEFYA

NT seq 603 nt +upstreamnt +downstreamnt
atgcaagtcgctcgcctcgccggcctgtacgccgctctcctgctcgccgtcggcgtggct
gctgagtcggtgagagaaactgagattatggatccaaaactgaacatagaggaatttgca
tctggtgacttgccagatgatgaagatgcaaggtcagacttaacagttgattataatgat
ggtgaagagttctcgggttcaggagatgaacaaggttatacagatatggaggataaattg
gtttctgccaccagtagcactatggattccatggacaactctattcctgactccaaaaaa
gattccaaggatgaaattgcaccagctgtcatagacaatgagattattgtacccaaaaaa
tcatctcctgaaggagaagacctgtctaacaaggtctcaatggccagcacagccaatggg
agcatctttgagagaacagaagtgcttgcagctcttattgcaggtggagcagttggtctc
ttgtttgctgtcttcctgattctgctcctaatctaccgcatgaagaagaaggatgagggt
agttatgaccttggcaagaaacccatctacaagaaagctcctacaaatgaattctacgcc
taa

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