Notechis scutatus (mainland tiger snake): 113411020
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Entry
113411020 CDS
T09026
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113411020 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nss03041
]
113411020 (PRPF38A)
Spliceosome [BR:
nss03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113411020 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
113411020 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
113411020
NCBI-ProteinID:
XP_026521660
Ensembl:
ENSNSUG00000018309
UniProt:
A0A6J1TUJ2
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRYTGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKNQNRNGEFELMHVDEFIDQLLHDERVCDIILPRLQKRYVLEEAEQLETR
ISALEEDMDDVESSEDEEEEDEKLDRAPSPDHRRRGYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSLRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccggacggtaaaagacgcgcacagcatccacggcacgaacccacaatatctg
gtggagaagatcattcgcacccgcatctacgagtccaagtactggaaggaagaatgcttc
ggcctcacagctgaattggttgtagataaggctatggaactgagatacactggtggagtt
tatggtgggaacataaagcctacaccattcttgtgcttgactctgaagatgctgcagatt
cagcctgaaaaagacatcattgttgaatttataaagaatgaagacttcaaatatgtgaga
ttacttggtgcattatatatgagattgactgggactgccatagactgctacaaatacctt
gaacctttatacaatgattatcgaaaaataaaaaaccaaaatagaaatggggagtttgag
ctcatgcatgtcgatgagtttattgatcaattgcttcatgatgagcgtgtctgtgatatc
attttacctagactacagaaaagatacgttctagaagaagctgaacaactggaaacacgg
atcagtgctttggaagaggatatggatgatgtagagtctagtgaggatgaggaagaggag
gatgaaaagctggatagagccccttcccccgatcacagaagaagaggatatagggattta
gacaaacctcgtagatctccaacactgcgctacagaagaagtcgaagtagatctcctaga
aggcgaagccgatctccaaagaggagaagtccttcactacggcgtgagagacatcgcagt
aagagcccaaggaggcaccgaagtagatctagagaaagacgccacagatcaagatctaaa
tctccagggcaccatcgtagccacagacatcgtagtcattccaagtctccagaaagatct
aaaaagagccataagaaaagccgtcggggaaatgaataa
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