Notechis scutatus (mainland tiger snake): 113411516
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Entry
113411516 CDS
T09026
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nss03000
]
113411516 (PRDM1)
Transcription factors [BR:
nss03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
113411516 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
STL11_N
B129_C2H2-zf
zf-C2H2_FBX41
Motif
Other DBs
NCBI-GeneID:
113411516
NCBI-ProteinID:
XP_026522403
Ensembl:
ENSNSUG00000018069
UniProt:
A0A6J1U1A2
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MKMDMKDADMTLWTEAEFEDKCTYIVNDHPIEPSSAEGCTITQAESSLPRNLIFKYAGNC
KEVIGVISKDIIPKGTRFGPLVGEIYTSDTVPKDANRKYFWRIYSGDEFLHFIDGFNEEK
SNWMRYVNPAHSVQEQNLAACQNGMNIYFYTIKPIPPGQELLIWYCQDFADRLHYPSTGD
LVMLNTQSHNRPKQQTCDKDELFQKNLPRREHSVKEILKTDSNHPRGRDLCCSHVIPHTQ
EKDLEVLRKNCSPERRPFYPRAVYPIRPHIPEDYLKVSLAYGIDRPSYLAHSPIQPSTTP
SPSARSSPDQSLKSSSPHSSPGVTISPLASVTQEHREPYSYLNGLYNTEGLGSYSGYAPS
SHLSQTFPYPKFLLPPYGMSINNFNLFPRMYPLYSSFFSGGNLSPHILNSSTLPSSLPSD
GSRHFLQPDHPRDLLIPAHNSAFSITGAAASMKDKPCSPTSGSPTAGTAATSEHIMQAKP
TSAVLAATSSEEAINLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVH
LRVHSGERPFKCTTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLH
SGEKPYQCKLCTAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIHLCSLKVHLKGNCPVI
PAHNLSTEDLNRINEEIEKFDISDNADRLDEVEDSVDVASVVGKEILAVLRSEIEGATLK
ASLQRNLGNGLVSSGCNLYEASDVSVVKLPHAHPLPQVPIKVKQETDEPMDP
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacatgaaggatgctgatatgactctatggacagaagctgaatttgaagac
aagtgtacctacattgtaaatgatcatccgatagaacccagctctgcagaaggttgcacc
ataactcaggccgaatcatctttgccaaggaacttgattttcaaatatgcaggaaattgc
aaagaggttattggagttattagcaaagatattatccccaaaggaacacgctttggacca
ttggttggtgaaatctataccagtgacaccgttcctaaggatgcaaacagaaaatatttc
tggaggatctattctggtgatgaatttctccatttcattgatggatttaatgaagaaaaa
agcaactggatgcgttatgtgaatccagcccactcagttcaggaacagaacttggctgca
tgtcagaacggcatgaacatctacttctacaccatcaagcctattcctcctggccaggaa
ttgcttatctggtattgtcaggactttgccgatagattgcattatccttccactggagac
ctggtgatgttgaatacccaaagccacaataggccaaagcaacaaacctgtgacaaagat
gaactttttcagaaaaatcttccgagaagagaacatagtgtgaaggaaatcctaaaaact
gactccaatcatcctagaggaagggatttgtgctgtagccatgttattccacatactcaa
gaaaaagacttagaggtcttaaggaaaaattgtagtcctgaaaggaggcctttctatcct
cgagctgtctatcccatcagacctcacattccagaagattacctgaaggtttccctggct
tatgggattgataggcctagttaccttgctcactcacctatccagccttctactacccca
agtccttcagcaagaagtagcccagaccaaagtttaaaaagttcaagccctcacagcagt
ccaggagttacaatttcacccttagcttctgtgactcaagagcacagggagccttattct
tacttgaatggactgtataacacagaaggattagggtcatattctggatatgccccctca
agccatctttcacaaacctttccctatcccaaattcctattaccaccatatggcatgagc
atcaacaatttcaatctcttcccaaggatgtatcctttgtacagcagcttcttcagcggt
ggaaacctttcccctcatatcctgaactcatctacccttccaagttccttgccatcagat
gggagccgtcacttcttgcagccggatcatccaagggaccttctgattcctgcacacaac
agtgccttctccatcacaggagctgctgccagcatgaaagacaagccatgtagccccaca
agtgggtcgcccactgcaggcactgcagccacttctgaacacatcatgcaagcaaaacct
acctcggcagtattagctgccactagcagtgaagaagccataaatctcatcaagaacaag
aggaatatgactggttataaaacacttccctatcccttgaaaaaacagaatggcaaaata
aagtatgaatgcaatgtctgctccaaaacctttggccagctctccaatctgaaggttcat
cttcgagtacatagtggagaaagaccattcaaatgtactacttgcaataaaggattcact
cagttggctcacctccagaagcactatctggtacacacaggagagaagcctcatgagtgt
caggtctgccataaacgattcagtagcacaagcaacctgaagacccatctgcggctgcat
tcaggagaaaaaccttatcagtgtaagctgtgcactgctaaattcacccagtttgtgcac
ctaaagctacacaaacgactccacaccagagagcgcccacacaagtgtatccactgtcat
aaaagttacatccacctttgtagcctcaaggtccacctgaagggaaactgccctgtaatt
cctgctcacaacctttctacagaggaccttaaccggatcaatgaagagattgagaaattt
gacattagtgacaatgcggacaggttggatgaagttgaggacagtgttgatgtagcatcg
gtggtagggaaagaaatactcgctgtgcttagaagcgagatagaaggagccacgcttaaa
gcatcattacagagaaacctggggaacgggctggtctcctctgggtgtaacctttacgaa
gcctcagatgtatcggttgtgaagttgcctcatgctcatccactacctcaggtacctatc
aaggtcaagcaagagacagatgaaccaatggacccttaa
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