| Entry |
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| Symbol |
UPF3A
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| Name |
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 3A
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| KO |
| K14328 | regulator of nonsense transcripts 3 |
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| Organism |
nss Notechis scutatus (mainland tiger snake)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:nss00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113411571 (UPF3A)
03015 mRNA surveillance pathway
113411571 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:nss03019]
113411571 (UPF3A)
Messenger RNA biogenesis [BR:nss03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113411571 (UPF3A)
mRNA cycle factors
P-body specific factors
113411571 (UPF3A)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
437 aa
MSKTVVCPXFTCIVLQVVIRRLPPNFTKEQLEEQLHPLPAHDYFEFCSSDPSLYPHLYSR
AYINFRNPDDILLFRDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKSGSIED
DPEYRKFLESYCAEEEKICANPETLLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIRE
EKREERRRRESEKKRLREDEKRKRREEERRKRKEVEKQKKIAEKEIRIKLLKKPEKGDEQ
TTEKHREKEKGDIEDNKWEKSPGHGSLKSKPLEVPLKELKEKSQNDSDKEQRDSERRFRE
KEPERQRYRLEDGRKHRTHYEFDKYVRRNEDEPKWEKGYNQDRGKKVNYNYSFTVDTVDK
LGKEDKCDDMASKKERIRNKDRPAMQLYQPGIRIRTHMGPTSRFYDCAEKTSQEVYDRGF
EADNSAGGGSEKSEDVE |
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| NT seq |
1314 nt +upstreamnt +downstreamnt
atgagtaaaactgttgtatgcccgngttttacctgtattgttttgcaggtagttattcgc
cggcttcctcctaattttactaaggagcagctagaagaacaactccatccacttccagct
catgattattttgaattttgttcctctgatcccagtctttatccccacctctactcaaga
gcatatattaattttagaaatcctgatgacatccttctttttagagatcgctttgatggc
tatgtcttcattgataataaaggtttggaatatcctgctgttgttgaatttgcaccattc
caaaagatttctaaaaagaaactaaagaagaaagatgcaaaatctggaagcatagaagat
gatccagaatatagaaaatttttagaaagttattgcgctgaagaagaaaaaatatgtgcc
aaccctgaaacacttctgggagaaattgaagcaaaaacaagagaactcattgctagaaga
accaccccacttttggaatatattaaaaacagaaaattagaaaaacagagaattcgagaa
gagaaaagggaagaaaggaggagaagagaatcagaaaaaaaacggctaagagaagatgag
aaacggaaacgccgagaggaagaaagacgcaaaagaaaagaagttgagaaacaaaagaaa
attgctgaaaaagaaataaggattaagcttcttaagaaacctgaaaagggagatgaacaa
actacagaaaagcacagagaaaaagaaaaaggtgatattgaagacaacaaatgggagaaa
tcaccaggacatgggagtttaaaatctaagccattggaagttcctctaaaggaacttaag
gaaaaatcacaaaatgacagtgataaagaacaaagagattcagaaagaagatttcgtgaa
aaagaacctgagagacaaaggtatcggttggaagatggccgaaagcacagaactcactat
gaatttgacaaatatgtgagacggaatgaagatgaaccgaagtgggagaaagggtacaac
caagaccgaggaaagaaagtgaactacaactacagcttcactgtggacacagtagacaaa
ctgggtaaagaggacaagtgtgatgacatggcatccaaaaaggagcgcataagaaataag
gatcgcccagccatgcagctgtatcaaccaggaattcgcattcgaacacatatgggacct
acaagtaggttctatgactgtgctgaaaaaacttctcaagaagtttatgacagaggtttt
gaggcagacaactcagctggtggtggttctgagaagagtgaagatgtagaataa |
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