Notechis scutatus (mainland tiger snake): 113411610
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Entry
113411610 CDS
T09026
Name
(RefSeq) E3 SUMO-protein ligase RanBP2-like isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03013
Nucleocytoplasmic transport
nss03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113411610
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113411610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113411610
03110 Chaperones and folding catalysts [BR:
nss03110
]
113411610
04121 Ubiquitin system [BR:
nss04121
]
113411610
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113411610
Chaperones and folding catalysts [BR:
nss03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
113411610
Ubiquitin system [BR:
nss04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
113411610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
TPR_1
TPR_2
TPR_CcmH_CycH
TPR_16
TPR_14
ANC1_spectrin
TPR_8
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
113411610
NCBI-ProteinID:
XP_026522536
UniProt:
A0A6J1TVW7
LinkDB
All DBs
Position
Unknown
AA seq
3025 aa
AA seq
DB search
MMRRSRAEVDRYVSSLQASAPSPKEKSMKGFFFAKLYYEAKEYELAKRYISIYLSVQERD
PKAHKFLGQLYEAENNIEKAVGCYKRSVELNPIQKDLVLKIAELLCSNDITDGRAKYWVE
RAAKLFPGSPSIFRLKESLLDCRSENGWNQLFDLIQTELYTRPDDVYVNIRLVKLYLSNN
RLGDAVAHCQEAEKKISLRSNLEWCSCVVQTFKEYLESVEDSESDKISWRKIQRDLLLAY
CNLVVMKLSARDVEESRASLESFDHTLHLVKSHADGSDELSVTFLEMRGHFYMHAGTLLL
KMAQQSEMQWRAVSELAALCYLHAFQVPRPKSKLIKGDHAEQEKLEMLACDRQSQSGFML
LNLSCGKQDFLTEVVESFANESGHSALFYALFGDVSSKENSFLGADDIKNVGIQAPECIE
LARYDTGAIRAHDGSLQHITWLGLQWNSAQAVPAIRKWLKQLFHLPQETSRLETNAPESI
CMLDLEVFLLGVIFTSNLQLQEKFHTKYTVHQPRFLPLPICKQLCTERQRAWWDSVYTLI
HKQAVPGTAAKVRLLVQHELNILRALGKHGLQPSLIVHWAKSLLKTGCSLNSFYDQREYI
GRSVYYWKKVLPMLETIKKKRSISEPIDPLFKHFHSEDIQLSQVEEYQEEARIAFAILDA
VDGKTDDATHAFEAINNIVAYWNLALIFQRKAEEIENDGLSPEEQEEGRKYLKKSRDYLL
KIIDESCMDSSVIEKLPVSIRTVKEMLEGIMQDLGDNGEERSLVNNLSHPVESEVKHSTP
SPTVFSLSPSKSYKFSPKTPPRWVEDQKSLLQMICQQVESIKHEMQEMKLNNSNTNLSNR
WPAENYSTETMPDGYQGAQNFHGAPLTVATTGPSVYYNPSPVYNSQYLLRTAATNVTPTK
APVYAMNRLTPQQHLYTYQQPMHTPPLQNTSACMFSQDMYGTPLRFDSSAPGILSPRGNE
DYYNYSVPPTSTNPPLPEPGYFTKPSTAPPVSRSAETKMIEFGKPNFGQPPISADGAKPS
LIISAQPTTFKFNSNFKSNDGDFTFSSPQVVGQPHNANYSNSDSLLGLLTSDKPIKEDRY
SGQKPPAEYVTGQRNIFSFGGKNSSGVSLTDKMGHAQSKPSGFGKDDMFGCQELGKPVFG
TPNLDGANRSHETDGGSVHGGEEEDDGPHFDPVVPLPDKIEVKTGEEDEEEIFCNRAKLF
RFDSECREWKERGVGNVKILRHKITGKIRLLMRREQVLKICANHYINPDMTLKPNAESDK
SFVWHALDYADELPKPEQLAIRFKTPEEANLFKHKFQEAQNSLKGAGSDLGRQVVPNIRP
SRETATQDRKEPGKAETGFLNSGFHFKNGGTPFSGSSQVPSPDVNSAAKNTNVRSTFSIT
SGGTTPASFSFGKDVSGTHTTYGFGEQFVLKKDQWECSTCLVRNKITSQKCIACQSPNPF
NWEAQAVLPEESSASLKPGSEGAQNTFGPLSTTVENQWECKNCSRKNEASASHCISCKNP
SGISNPTFGSQTPFKFGQTDTSKVTSKVPQSGFGAAFMKKEGQWDCGICLVRNEGSLPAC
AACQAPNPSCDASPLSANGSPAAFGFKSKLSESAGKPQETGFKCEVSDKTFKFGIPTEQE
KSPFPFQVPATTEPKAIIKGGFNFSMPVPPGEFKFGIQDSSEEVANSEQNEEVNVFKSID
DKEKKSEKETETQLPSACNKPISDLVFGQQSNTFTFADLAKSGEGFKFGQKDPNFKGFTG
AGEKLFSSQISKMSSKLNTSADLEKDDDEYKTEDSDDIHFDPVVQMPEKVELVTGEEDEK
VLYSQRVKLFRFDAEIKQWKERGVGNLKILKNEVNGKLRVLMRREQVLKVCANHWITTTM
NLKPLSGSDKAWMWLANDFSDGDAKLEQLAAKFKSSEQAEEFRLKFEECQRLLLDIPLQT
PHKLVDTGKTAELIQKAEEMKSGLKDLKTFLTDDKTKLIDEEKTLVSSSNSSDLVIKPHA
ESTGPTLEWDNYDLRGEALDDSSDSSVYPMPRASSPVRKNLFRFGESTTGFNFSFKSALS
PSKSPSKQNQSRVSVGTDEESDVTQEDERDGPYFEPVVPLPDLVEVTSGEENEQVVFSHR
AKLYRYDKDANQWKERGIGDIKILQNYDTKQVRVVMRRDQVLKLCANHRITPNMNIQQMK
GAERAWVWSACDFAEGERKMELLAVRFKLQDVADSFKKIFEEAKHAQEKDILITPLSSRT
NTPKESPCGKIAVAVLEETTRERTDLKEAEETVVEAAETPVVEGTAETPTKAVVSPPKFV
FGSESVKTIFNDKKSKPFTFGNTSATGSLFGFSFNAPPKSPGDDSVCQTMNAKKSDSSQD
AMACRHAEHQENSSAANWKPSEGQGETPAATSKAEAVSNFSFKILEKAEIKKEPNTIPSD
DVLIVYELTPTADQRALAESLKLPPTFFCYKNKPGYLSEDEDDEDYETAVRRLNGKLYLE
EPKENSEIMNTSATEHSDPETSNEVIVVWEKKPTPKEKAKAETLKFPPTFLCGINSDTDE
DNDNLEDFETELRKTQETKESQAEEIITSTDDVCSGEEGGPDVSCSITEVSDSTTNLIYT
TWDTLRTDGNSTPETAQSFKNLLGTDDKPVDLSNKKECDSSSEASVNQENNPFSFALHNV
SSLSFADLASNNSGDFAFGSKADKNFKWANTGAAVFGIQAATKGDCDDDASDEDVVHSDD
IHFEPIVSLPEVEVKSGEEDEEIIFKERAKLYRWDREVNQWKERGVGEIKILFHTQKKCY
RILMRRDQVLKVCANHIITKAIDLKPLNSSNNAMVWTATDYADGEAKVEQLAVRFKTQEL
ADTFKKKFEECQLILSEEQKGHVSFAEKFSKESNPVVYLDISADDEPLGHVRIELLSNVV
PRTAENFRALCTGEKGFGYRNSRFHRIIPDFVCQGGDITKHDGTGGQSIYGNSFEDENFE
IKHTGPGLLSMANCGRNTNNSQFFITLKKAEQLDFKHVVFGFVKDGMDIVKKIESFGSPE
GIVSKRIVITDCGQIQNDSADILEA
NT seq
9078 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggcgcagcagggcggaagtggatcgctatgtttcctccttacaggcctcggcc
ccttcgccgaaggagaaatccatgaaaggattcttttttgctaagctgtattatgaagca
aaggaatatgaacttgctaaaaggtatatatctatatatctcagtgtccaagaaagagat
cccaaagcgcacaaattcttgggacaactgtacgaagctgaaaataatattgaaaaagca
gtgggctgttataaacgttcagtggaattgaatccaatacagaaagaccttgtattgaag
attgcggaactgttatgtagcaatgatattactgatggaagagcaaaatattgggttgag
agagcagccaaactctttcctggaagtccttcaattttccggttgaaggaaagcctcttg
gattgtagaagtgaaaatggatggaaccaactttttgacttgattcagacagaattgtat
actcgaccagatgatgtatatgttaatatcagattagtaaaattatacctgtcaaataac
aggcttggtgatgctgtggcacattgccaggaagcagagaagaaaatatccttacggtca
aatttggaatggtgttcctgtgttgttcaaacatttaaggaatatctggaatctgtagag
gactctgaatcagataaaattagttggagaaagattcaaagggaccttttactggcatac
tgtaatctggtagtaatgaaactttctgccagagatgtagaagaaagtagagcatcactt
gaaagctttgatcatacacttcatttggtaaaatcacatgcagatggaagtgatgaactt
tctgtcactttcttggaaatgagaggacatttctatatgcatgctggaactctgctgctg
aaaatggcccagcagagtgagatgcaatggagagctgtttctgaactggcagctttatgt
taccttcatgcttttcaggttccaagaccaaagtcaaaactaataaaaggagatcatgct
gaacaagaaaagttggaaatgttagcctgtgaccgacagagccagtctggctttatgctc
ttaaacctaagctgtggaaaacaggattttttaacagaggttgttgagtcatttgcaaat
gagagtggacactctgctttattttatgctctgtttggggatgtttcttctaaagagaac
tcatttcttggcgcagacgatataaaaaatgttggtattcaggctccagaatgcatagaa
ctagctagatatgatactggtgccattagagcacatgatggtagtctccagcacatcacg
tggcttggtctgcagtggaattctgcacaagctgtgccagccattcgtaaatggctaaag
cagcttttccatttgccccaggagacatcgagacttgaaaccaatgctcctgaatctatc
tgtatgctggatcttgaagtgtttctacttggggtaatatttaccagtaacttgcaatta
caagagaagtttcatactaagtacactgtacatcagcctcgattcctgccactgccaata
tgcaagcaactttgtactgaaagacaaagagcctggtgggattcagtttataccctcatt
cataagcaagcggtacctggaacagcagcaaaagtaagacttttagttcaacatgaattg
aacatcctcagggccttaggaaaacatggtcttcaaccatctcttatagtgcactgggca
aaaagtctccttaaaacaggctgcagtcttaattctttctatgatcagagagaatacatt
gggcgaagtgtttattattggaagaaagttttgccgatgcttgagacaataaagaaaaag
aggagcatttctgaacctattgatccattgttcaaacattttcatagtgaagatattcag
ctttctcaggttgaagaatatcaagaagaagctcgtatagcatttgctattttggatgct
gttgatggtaaaacagatgatgctacgcatgcatttgaagctattaataatattgttgca
tattggaatcttgctttgattttccagaggaaagctgaagagatagaaaatgatggtttg
tcaccagaagaacaagaagaaggcaggaaatatttgaaaaaaagtagggattatctccta
aagataattgatgagagctgcatggattcatctgtcattgaaaagttacctgtatccatc
aggacagttaaggagatgctggaaggcataatgcaggatcttggagataatggagaagaa
aggagtcttgtgaataatttgagccaccctgtggaatcagaagtgaaacattctacgcca
tcacccacagtattttcactatctccaagtaaaagttacaagttctctcccaaaactccc
cctcgctgggtcgaggatcagaagtctctgctgcagatgatctgtcagcaagtggagtcc
attaagcatgaaatgcaagaaatgaaacttaacaactctaacacaaatctgtctaatcgg
tggccagctgaaaactattcaacagagacaatgccagatgggtaccagggagcacaaaac
tttcatggagcaccattaactgttgccactacaggaccatcagtctactacaacccatca
ccagtatataattctcagtatcttctacgaacagcagcaaccaatgttactcccacaaag
gctcctgtctatgccatgaatagacttacgccccagcaacacctatatacctatcaacag
cccatgcatactcctccactgcagaacacatctgcttgtatgttttcacaagatatgtat
ggtacaccactgcgttttgattcttctgcacctggaattttgtctccacgaggcaatgaa
gactactacaattacagtgtgccaccaacaagcacgaatccacccctccctgaaccaggc
tactttacaaaaccttccacagcacctcctgtttccagatcggccgaaacaaagatgata
gaatttgggaagccaaactttggacagcctcctatatcagcagatggagcaaaaccttca
ttaataatttctgctcagccaaccacttttaaatttaattctaatttcaaatctaatgat
ggcgatttcaccttttcatcgcctcaagttgtaggacagccccataatgcaaactatagc
aacagtgacagcctattgggtcttttgacatcagataaacctatcaaagaggatcgctac
tcgggacagaaaccacctgctgaatacgtcacaggacagcgcaacatattcagttttggt
ggtaaaaattcttctggtgtttcattaacagataaaatgggccatgctcaatccaagcct
tctggatttggcaaggatgatatgtttggttgtcaagaactgggcaagcctgtatttggg
acgccaaacttagatggagcaaacagaagtcatgaaacagatggtggcagtgtccacggt
ggggaggaagaagatgatggtcctcattttgaccctgttgtccctctgcctgataagatt
gaagtaaaaacaggtgaagaagatgaagaagagatcttctgtaacagagcaaaacttttc
cgttttgacagtgaatgccgagaatggaaagaaagaggtgttggtaatgtcaagattcta
aggcataaaataacaggcaaaattcgactacttatgagacgagaacaagtgttgaaaatt
tgtgcaaatcattatataaatcctgatatgactttgaaaccaaatgctgagtcagacaaa
tcttttgtatggcatgctttggactatgcagatgaattgccaaaacctgagcaacttgcc
attagatttaaaactccggaagaagcaaaccttttcaagcacaaatttcaggaagcacaa
aatagtttgaaaggtgctggatcggaccttggccgtcaagtggttccgaacattaggcca
tcaagagaaactgctacacaggataggaaagagcctggtaaagctgaaactggattcctg
aattctgggtttcatttcaagaatggggggacccccttcagtggtagctctcaggttcct
agtcctgacgttaacagcgcagcaaaaaataccaatgtcaggagcactttctcaattaca
tcaggtggaactacaccagcatccttttcatttgggaaagatgtttctggaacacacaca
acatatggctttggagagcagttcgtgttgaagaaagatcagtgggaatgtagcacatgt
ttagttaggaataaaataacctcacaaaagtgtatagcatgccagtctccaaacccattt
aattgggaagctcaggctgtacttccagaagaatcatctgcatctttaaagcctggaagt
gagggagcacagaatacatttggacccctttctactaccgtggagaaccagtgggaatgc
aagaactgttctcgtaagaatgaagcaagtgcttctcattgtattagttgcaagaatccc
agtgggatcagcaatccaacgtttggttctcaaaccccattcaaatttggccaaacggat
acttcaaaagttacttcaaaagttccacagagtggctttggggctgcttttatgaagaag
gaaggacagtgggactgtggtatatgtttagtacgaaatgaaggatctttgccagcttgt
gcagcttgtcaggctccaaatccctcttgtgatgcttcccctctgtctgctaatggctca
ccagctgcttttggcttcaagagcaagttatctgaatctgctggaaaaccacaagagacg
ggttttaaatgtgaagtatcagacaagacttttaaatttggcattcccacagagcaagaa
aagtctccctttccattccaggttcctgctactactgagccaaaggctataataaaggga
gggtttaatttttcaatgcctgtccccccaggagaatttaaatttggtattcaggactct
agcgaagaggttgcaaattctgaacaaaatgaagaagttaatgtctttaaaagtattgac
gataaagagaagaaaagtgagaaagagactgaaacacagttgcccagtgcatgtaacaaa
ccaatcagtgatttggtttttggtcagcagagcaatactttcacttttgctgatcttgcc
aagtcaggtgaaggatttaagtttggtcaaaaagatcctaattttaagggcttcacaggt
gcaggtgaaaaactcttttcttctcagatttctaaaatgtcttccaagctaaatacttct
gctgatcttgaaaaagatgatgatgaatataaaacggaagacagtgacgatattcatttt
gatcctgttgttcagatgcctgaaaaagtggaacttgtgacaggagaagaggatgagaag
gtactgtattcacaaagagtgaaactgttcaggtttgatgcagaaattaagcagtggaaa
gagcgtggtgtgggtaacctgaaaatccttaagaatgaagttaatggtaaacttcgggtg
ctgatgaggcgtgaacaagtgttgaaggtttgtgcaaatcactggatcacaactactatg
aatctgaaacctctctctggctcagacaaagcatggatgtggctggctaatgacttctct
gatggggatgcaaagctggagcaattggcagctaaattcaagtcttcagaacaggctgaa
gaattcagactgaaatttgaagaatgtcaaagactgttgttggatataccacttcaaact
ccacacaagcttgtagatactggaaagacagctgagctgatacaaaaagcagaagaaatg
aaaagtgggttgaaagatctcaaaaccttccttacagatgataaaactaaactcatagat
gaagagaaaactttagtgtcttcctctaacagttctgatctagttataaagccacatgct
gaaagtactggacctacattagaatgggacaactatgatttgcgtggggaagctctggat
gacagcagtgacagttcagtgtatccaatgcctcgggcaagtagccctgtgaggaaaaat
ctatttagatttggagagtctaccacaggatttaacttcagtttcaaatctgcactaagt
ccttcaaaatctccttccaaacagaatcagagtagggtttctgttggtacagatgaagag
tctgatgtcacccaagaagatgaaagagatggtccatattttgaaccagttgtgccttta
cctgaccttgtagaagtaacaagtggtgaagagaatgagcaagtagtctttagtcaccga
gctaaactatatagatacgataaagatgctaaccagtggaaagagaggggcattggggat
ataaagatcttacagaactatgatactaagcaggttcgtgtagttatgagaagggatcag
gtgttaaagctttgtgcaaaccatagaataacccccaatatgaacatccagcaaatgaaa
ggtgcagagagagcctgggtgtggagtgcatgtgactttgccgaaggggaaagaaagatg
gagctcttggctgtgcgatttaaacttcaggatgttgctgattcatttaagaaaattttt
gaggaagcaaaacatgctcaagaaaaagacatattaatcacaccactctcttcccgtact
aacaccccaaaagaatctccctgtggaaagattgctgttgcagtattggaagaaaccacg
agggagagaactgatttaaaggaggccgaagaaacagttgttgaagctgcagagactcca
gtagttgagggcacagctgagacgccaacgaaagctgttgtttcccctcctaaatttgta
tttggctctgaatctgttaaaactatatttaatgacaaaaaatcaaaaccttttacattt
ggaaacacatcagcaacaggctcactctttggtttcagttttaatgctcctcccaagagc
ccaggtgatgattcagtgtgtcagaccatgaatgcaaaaaaatcagatagctcacaggat
gctatggcttgcagacatgcggaacaccaagaaaatagtagtgctgctaattggaagccc
tcagaaggccaaggagaaactccagcggctacctcaaaagcagaagcggtttctaacttt
tcattcaaaatactagaaaaagctgagattaagaaggaaccaaatacaatcccatcagat
gatgtattgattgtgtatgagttaacaccaaccgctgatcaaagagctcttgcagaatcc
cttaaattacccccaacattcttctgctataagaataaacctgggtatctgagtgaagat
gaagacgatgaagactatgaaacagctgtcagaaggcttaatggaaaattgtatttagaa
gaacctaaagagaactcagaaataatgaatacaagtgctacagaacattctgatccagag
actagtaatgaagttattgttgtttgggaaaagaaaccaactcctaaggaaaaagctaaa
gcagaaactctaaagtttcctccaacttttctctgtggtattaacagtgacactgatgaa
gacaatgacaacttagaagattttgagacagaacttagaaaaactcaagaaacaaaagaa
tctcaggcagaagaaataattacttcaactgacgatgtgtgctctggtgaggaaggtgga
ccagatgtatcctgcagtattactgaagtatcagattctacaaccaaccttatatatact
acatgggatacattaagaacagatggcaactctactcctgaaactgcacaaagctttaag
aatttattaggaacagatgacaaacctgttgatttatcaaataagaaggaatgtgattcc
agttctgaagcctctgtaaatcaagaaaataatcccttttcctttgctcttcataatgta
tcgagcttgtcatttgctgatctggcttcaaacaattctggggattttgcttttggttcc
aaagcagacaaaaactttaagtgggcaaatacaggagcagctgtatttggaatacaagca
gccactaaaggggattgtgatgatgatgcaagcgatgaagatgtggtacacagtgacgat
attcattttgaaccaatagtctcactgccagaggttgaagtaaaatctggagaagaagat
gaagaaattatcttcaaagaaagggcaaaactatacagatgggacagagaagtcaatcaa
tggaaagaacgtggtgttggagaaataaagattctcttccatacgcaaaagaaatgttac
cgaattttaatgagaagggatcaagttctcaaagtctgtgcaaaccatataatcacaaaa
gcaatagacttaaaacccttgaattcttcaaacaatgccatggtttggactgcaacagat
tatgctgatggtgaagctaaggtagaacagcttgcagttagatttaaaacccaagaactg
gctgataccttcaagaagaaatttgaagagtgtcaactgattttgtcggaagaacagaag
ggacacgtatcttttgcagaaaaattttcaaaggaatctaaccctgtagtatatcttgac
atttctgctgatgatgaacctctggggcatgtaagaatagaattgctttccaatgttgtt
cctcgaaccgctgaaaacttcagggcattgtgcacaggagaaaaagggtttggataccga
aactctagatttcacagaataattccagattttgtctgtcagggaggtgacatcactaag
catgatgggacaggggggcagtccatttatggaaattcatttgaagatgaaaattttgaa
ataaaacacactggtcctggcctattgtcaatggcaaattgtggcagaaataccaacaat
tctcaattctttattactctcaaaaaagcagaacagttggactttaaacatgttgtcttt
gggtttgtaaaggatggtatggatatagtgaaaaaaatagaatcttttggttctcccgaa
ggaatagtgtcaaaaagaattgtgattacagattgtgggcaaatacaaaatgattctgct
gacatattggaagcttaa
DBGET
integrated database retrieval system
