Notechis scutatus (mainland tiger snake): 113411817
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Entry
113411817 CDS
T09026
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113411817 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nss04990
]
113411817 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
nss04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
113411817 (SYNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
113411817
NCBI-ProteinID:
XP_026522865
Ensembl:
ENSNSUG00000008864
UniProt:
A0A6J1TXR3
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MGVQDYICITMTGGAPWGFRLQGGKEETQPLQIAKIRNKSKASKAGLCEGDEVISINGKP
CTELTYSEVLLLMEGLTDTLQMLIKRFSNGANETLSSELENENLTDIKNKEYKESTTLQI
RTAMPSPHQELQIIVPTEETLPTNTRQTTVDFSGAKQEIIPCYKIPPKVIEAPKVHCTEA
SAFTGGKPGSTVELQLSFPPDRNKSSSTGSGLTVVEVQESKPLETGSVLTQEAISWLKEP
SAQWTGKIVQIVGGKEIQETHEGERKEPSLTKVEVILDCSDQATEASRFLAEKGCVEAQV
EGGQSEAPPSVVSFGISSEGTEQGEDEQPSEKEPSRPHKHRARHARLRRSESLSEKQVKE
AKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELERYEDEGEEDEGEE
GEKENTFEVTLFGTSESEIDEDFFSDLDKEERIVTFDWDTGLLEIEKTPKRGDEMSQLLP
ETKGKGALMFAKRRQRVDQVTAEQEAVKMQSMRRIEAHQEATSTETIQNMSSSFYQAKQE
ESARMQKSHISKSYIEMNHSPRTIVQQNGIRVVPEINMIHPPPEAVSLSTSNRTAKPFPG
VQNRAAVPFSPPRSMVALPSELPAPPPYTSVSPPPETLYRTVLTPAATSMSQPTLWSPTE
STEQIASRDERIAVPAIRTGILQEAKRRSTAKPMFTFKEAPKMSPNPALLSLVQNTEGKK
PATGGFESGPEEDYLSLGAEACNFMQIQAAKQKIPPPVAPKPSVKVSPTATTPISPVWSP
PVVAVAQAPIFPVPKSPEVASPAAIKVAQPAYPPPQPPQPPQPPGTLHLESSFKGPQVSS
PHQNYTPKTTPITPLGNAVLAGGMGPAFEMPPAMSGKGAQLFAKRQSRMEKYVVDSETVQ
ANRPRPSSPTPSLPASWKYSSNVRAPPPVAYNPIQCPSYPLAAIKSQSQQPGATKTTKKK
SKKQLSSLEVMKHQPYQLNASLFTFQPPFDTKENLLPKHPSKIDSVSALKQAVPSRVLNA
GSPSNVQASSVYSVPAYSSQPFFPSSASSPVIEPYTSMGCPTFLKQEPAASPVFSVPKPK
FSAKKVGVTAQVWKPTVIEE
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcaggattatatttgcatcactatgactggaggggcaccttggggtttcaga
cttcagggtggcaaggaagaaacgcagcctttgcagattgccaagattcgaaataagagc
aaagcatccaaggctgggttatgtgaaggagatgaagtgatatccatcaatggcaaacct
tgcactgagttgacttattcggaagttcttcttctgatggaaggcctgactgacactctt
caaatgcttatcaaaagattctccaatggggcaaatgaaactttaagttctgagctagaa
aacgaaaacctcactgacattaaaaataaggaatataaagaaagcacaaccctacaaatc
agaacagcaatgccaagtccccaccaggaattgcagatcatagtgccaactgaggaaaca
ctcccaacaaatacaaggcaaactactgtggatttttctggagcaaagcaagaaataatc
ccctgctacaaaatccctcccaaagtgattgaagcccctaaagtacactgcacggaggca
tctgcctttactggaggcaagcccggctctacagttgagttacagttgtcctttccacct
gacaggaataaaagcagcagcactgggtctggtctgactgttgtggaggtccaagagagc
aagcctctggagacaggatcagtcctaacacaagaagcgattagctggctaaaagagccc
tctgcccagtggacaggcaagatagtccagattgttggtggcaaagagatccaagagact
catgaaggtgagagaaaggaaccctctctaactaaggttgaagtgattctggactgttct
gaccaggcaacagaagcatccagatttctagccgaaaaggggtgtgtagaggctcaagtg
gaaggagggcagtcagaagcacctccttctgtagtctcctttggaatctcatcagaaggc
acagagcagggggaagacgaacagccctccgaaaaggaacccagcagacctcacaaacac
cgggcaaggcacgccaggctgagaaggagtgagagcctatcagagaagcaggtgaaggaa
gctaagtctaaatgtaaaagtattgctctcttactgacagcagctccaaatcccaattcc
aaaggagtgttgatgtttaagaagcgtcgccaaagggccagaaaatatactttagttagc
tacggcactggggaactagaacgttacgaagacgaaggtgaagaagacgagggtgaagaa
ggtgagaaggagaacacttttgaagtaactttatttggcacaagtgagtcagaaattgat
gaagatttcttctctgacctggataaagaagaacgcattgtgacatttgattgggatact
ggactacttgagattgaaaaaacacccaaacgtggggacgagatgtcacagctgcttcca
gagaccaagggcaaaggggcactcatgtttgccaaaagacgtcaaagggtagaccaggtc
actgctgaacaagaagcagtgaagatgcagagtatgcgtagaattgaggcacaccaagag
gccacttcaacagagaccatccaaaatatgagttcttccttttatcaagcaaaacaagaa
gaatctgccagaatgcagaaaagccacatcagcaaaagctacatagaaatgaaccatagt
cctagaacaatagttcagcaaaatggcatcagggttgtcccagagataaatatgatacat
ccccctccagaagctgttagcttatctacttcaaacagaacagccaagcctttccctggt
gttcagaacagagcagcggttcccttttcacccccaagaagcatggtggctcttccctcc
gagctacctgccccacctccttatacttcagttagcccaccacctgaaacattatataga
actgttttgactccagcggccacaagcatgagtcagccaacactgtggtctccaacagaa
tcaacagagcagattgcatccagggatgaacggattgctgtgcctgcaataagaactgga
atattacaggaggccaagagaagaagcactgcaaagcctatgtttacatttaaagaagcc
cccaaaatgagtccaaatcctgctcttttgtccctcgtacagaatacagaaggcaaaaaa
cctgccactggtggctttgaatctggtcctgaagaagactacctcagtttgggagcagag
gcctgcaatttcatgcaaatccaggctgccaaacaaaagatcccacccccagttgctccc
aagccctcagtaaaggtttctccgactgccacaacacctatttcaccagtctggtcacct
ccagttgtggctgttgctcaagctcccatctttccagttccaaaatctccagaagtagca
agcccagcagccatcaaagtagcacaaccagcttatccccctccacagcctccacaacct
ccacagcctcctggtactcttcacctggagtcttcttttaagggtcctcaagtttcatca
ccccaccaaaattatacccccaaaacaacacccatcactccattaggaaatgctgtcctt
gctggtggaatggggccagcttttgagatgcctccagctatgagtggtaagggggctcag
ctctttgctaaaaggcaatcacggatggaaaagtatgtagtagactcagaaactgtgcag
gccaatcggccccggccttcatccccaactccttcattaccagcatcttggaaatattca
tctaatgttcgagcaccgcctcctgtagcttataatcccattcagtgtccatcttatcct
cttgctgctatcaagtctcagtcacagcaaccaggagctaccaaaactactaagaaaaaa
tctaagaaacaattaagctccttagaagtgatgaagcatcagccataccagcttaatgca
tctttatttactttccaacctccgtttgatactaaggaaaatctccttcccaaacatcct
tcaaagatcgattcagtgtctgccttgaaacaagctgtaccatcaagagtactcaatgct
ggttctccctctaatgttcaagcttcttcagtatattctgtaccagcctacagctcacaa
ccattcttcccatcaagtgcttctagtcctgtaattgagccctatacatcaatgggctgt
cctacatttttgaagcaagaaccagcagcatctcctgtattttctgttcccaagccaaaa
ttctcagccaagaaagttggtgtcacagcacaggtgtggaaaccgacagtcattgaagag
taa
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