Notechis scutatus (mainland tiger snake): 113411996
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Entry
113411996 CDS
T09026
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4 isoform X1
KO
K12881
THO complex subunit 4
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03013
Nucleocytoplasmic transport
nss03015
mRNA surveillance pathway
nss03040
Spliceosome
nss05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113411996 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
113411996 (ALYREF)
03015 mRNA surveillance pathway
113411996 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113411996 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113411996 (ALYREF)
03041 Spliceosome [BR:
nss03041
]
113411996 (ALYREF)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113411996 (ALYREF)
TREX complex
113411996 (ALYREF)
Spliceosome [BR:
nss03041
]
Complex C
Other components
EJC/TREX
113411996 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113411996 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Btz
Motif
Other DBs
NCBI-GeneID:
113411996
NCBI-ProteinID:
XP_026523105
Ensembl:
ENSNSUG00000010633
UniProt:
A0A6J1TYE1
LinkDB
All DBs
Position
Unknown
AA seq
255 aa
AA seq
DB search
MGDKMDMSLDDIIKLNRSQRGGGGRAGGGRGRGRGATSRGGGGAGRGGAGRAGGGGPVRN
RAALSRGGGRNRPAPYSRPKQLPEKWQHDLFESCFGPGAGVETGGKLLVSNLDFGVSDAD
IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNCVPLDGRPMNIQLV
TSQIDTQRRPIQSSVSRGGMTRNRGGSGGFGGGNRRGSRGNRGRGRGAGRSSKQQLSAEE
LDAQLDAYNARMDTS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaaaatggatatgtctttggacgacattatcaagctgaacaggagtcagcga
ggcggaggtggccgagccggcggtggtcgaggccggggaagaggagctacaagtcgaggt
ggaggaggagctgggcgaggaggagctggacgcgcaggcggaggcggccccgtccggaac
agagccgctctgtcccggggaggcggcaggaacaggcctgcgccctacagccggccaaaa
caactccctgaaaagtggcagcatgatttgttcgagagttgctttggccctggcgctggc
gtggaaacgggtggaaagctcctggtgtctaatctggattttggggtttcggatgcagac
atacaggagctttttgcagaatttgggacactgaagaaggcagcagtacactatgatcgt
tctggacgtagtctaggtactgcagatgttcattttgagaggaaggctgatgctttgaag
gctatgaagcaatacaattgcgttcccttggatggacgtcccatgaacattcagctggtt
acatcacagatagatacacagaggagaccaatacagagtagtgtaagtagaggtggtatg
acaagaaaccgtggtggctcaggtggctttggcggtggcaacagacgaggcagtcgtggc
aatagaggcagaggcagaggtgctggtaggagttccaaacagcagctctctgcagaagaa
ttggatgcacagttggatgcttataatgctaggatggataccagttaa
DBGET
integrated database retrieval system
