Notechis scutatus (mainland tiger snake): 113412053
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Entry
113412053 CDS
T09026
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
113412053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nss04121
]
113412053
Enzymes [BR:
nss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113412053
Ubiquitin system [BR:
nss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113412053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
ANCHR-like_BBOX
zf-RING_6
BNR_3
Sina_RING
PRY
zf-ANAPC11
zf-Nse
Motif
Other DBs
NCBI-GeneID:
113412053
NCBI-ProteinID:
XP_026523207
UniProt:
A0A6J1U3K7
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MQKIGFLFLEDNIVCPICLEVFRDPVTTDCGHNFCMNCLQVYWEHLALIGEQPYCPQCRE
PFSSEPQLHKNVTLGEIAMRFAREETQDLQKAASFKNVPCDFCFARKLKAVKSCLQCIAS
LCDNHIQSHYTDKVFKNHQLVEPLSDLKGSMCVKHRKLLEIFCKEEGKFICQICVREEHK
NHEVISLKQERSKKEVEVQRIHASVENQVLMLAEDHQKHRARANYLMKVVKNARDEVSWA
FTEILKELKRLQTKVMDFIDQEEKSALLVMGNSVQRRHKQIADLKKQKLWLTNLMDDPSD
FQFLQDFPKIKAITDSSQALIGLKCEELSSFVGIKQTLSDLTSQISMIGLCFVNKILQKG
ITMVPYELLPTSTDRKTLLKYYCILNFDATTANEELFLFKETHSVLNMGILLETYSKPTP
GFNHWPQLLGTRSLCEGCHYWEAEISNGWLCLGVAYSYRHRMEKSCMLYLIGRNNYSWCL
EWDSVNFSVWHNNIQTVLRGDYYKTIGVLLDYAAGSLTFYGITSTINLIYRFLTTFTEPL
YPAAMVSSGTSITLKQHPE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaattggctttcttttccttgaagacaatattgtgtgtccaatatgccttgaa
gtattcagagacccagtcaccacagactgtgggcacaacttctgtatgaattgcttgcag
gtttattgggaacacctagctctgattggtgaacaaccatactgccctcagtgccgggaa
cccttcagttcagaacctcagctccacaaaaacgtaaccttgggagaaattgcaatgaga
tttgcacgggaggaaactcaagatctacagaaggcggctagtttcaagaatgtaccatgc
gatttttgtttcgcgcgaaagttaaaagcagtcaagtcttgcttgcaatgtatagcttcc
ctgtgtgataaccacatccagtctcactacacagacaaggttttcaagaaccaccagctg
gtggaacctctcagtgacttgaaaggcagcatgtgtgtaaaacatcgtaagctgctagag
atattctgcaaagaggaaggcaaatttatttgccaaatctgtgtccgggaagagcataag
aaccatgaagtcatttctctgaagcaagaacgaagcaagaaagaagtggaggtccagaga
atacatgccagtgtggaaaaccaggtcctgatgttggcagaagaccatcagaaacatagg
gcaagagcgaattaccttatgaaagtggtgaagaatgccagagatgaagttagttgggcc
tttacagagatattaaaagaattaaagcgactgcagactaaggtgatggacttcattgat
caagaggaaaaatcagctttacttgttatgggaaattctgttcagcgcagacacaagcaa
attgcagatcttaagaagcagaaactgtggctgacaaatctgatggacgatccaagtgac
tttcaatttttgcaggacttccccaaaataaaggccataactgatagctcacaagctttg
attggactgaaatgtgaagaactcagcagttttgtggggattaaacagacactgagtgat
ttgacatcgcaaatctcaatgattggactctgcttcgtcaataaaatccttcagaaggga
atcacaatggtgccatatgaactgttacccacatccacagatcggaagactctcctaaaa
tactattgtatcctgaattttgatgccaccactgccaatgaagagctcttcctgttcaag
gagactcactctgtgctgaacatggggattttgttggaaacctattcaaaacccacccct
ggatttaaccattggccccagctgcttggtacccgcagcctctgtgagggctgccattat
tgggaggctgagatttccaacggctggttgtgcctgggcgttgcctacagctaccgccat
aggatggaaaaatcatgcatgttgtatctgattggcaggaataattattcatggtgcttg
gagtgggactcagtgaatttctctgtctggcataataatatccagactgtgctgcgtggt
gactactacaagaccattggggttctcctggactatgctgcaggctccctgaccttctac
ggcatcaccagtaccataaacctcatttaccgtttcttaaccacattcactgagccattg
tatccagctgccatggtaagcagtgggacttctattactttgaaacaacaccctgaatag
DBGET
integrated database retrieval system
