KEGG   Notechis scutatus (mainland tiger snake): 113412359
Entry
113412359         CDS       T09026                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
nss  Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:nss00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nss01009]
    113412359 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nss04121]
    113412359 (TRIM42)
Protein phosphatases and associated proteins [BR:nss01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     113412359 (TRIM42)
Ubiquitin system [BR:nss04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    113412359 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box Pur_ac_phosph_N Ig_DSCAM-DSCAML_C
Other DBs
NCBI-GeneID: 113412359
NCBI-ProteinID: XP_026523691
UniProt: A0A6J1TYX6
LinkDB
Position
Unknown
AA seq 725 aa
MTSRPCACCMTCPCCPGCNCIKKCLKICGPKQSSLCWKFMFTDERNCDCCYCPHEDDTSC
QCFHCAFSESPNCRWCCCSCANNRNCKCLCCTEENNECQCYESRCCTFPYLPYRRGAKLR
KSRGASDTSVITLDKEPSGHAFIDQLVCPLCQRMFLRPFMLPCNHCICDRCIMQSRLNAE
ITESFYIITCPICNRAHCLPFSKKMYLRINYLRARLARKYMRRYGFLRWRFDKSYVPIYC
QICDEQKADKRCLSCQLNYCNLCLRNYHQDISSLNHVYAKISDDIWEDKTCLIHGETMLS
KYCLEDHELLCEFCAEAQHSDHNKVSLSVACTKMSAMLFTTIAKFKKVRYVIDNDLMEVL
VLKNNFKSYKETKRKEIRNGFMRLRMIIQEREKELMEAVENLELQKQKALFEFASHATRK
IDQMDSLMQYSKEALKEQSPIAFLQSAWSLIKEVEDIIASLYQPNPYLKEDPIKHLKINF
EELAENLVSIFPSIRNKLRYEQMNKSPYPCGSDVMIPRTVSSAHIPNPLGLNRSLSLSSL
NSLPYQAFMSNELHIRPKSSPPTELKGNQLYSVWNAASDTSKDIRNDPSYGPSYNPDIQE
ESSSPPGLVVIYQTLVYPTIAKLYWTCPTEEVDSFEIAYYELLDEEAAESLIQPQLIGVL
TGIVQQNLEIHNLSPNTEYLFKVRAINEHGPGEWSEVCKVMTPDVRAKAKARWGLLRNVQ
SAFRR
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgacaagcagaccctgtgcctgctgcatgacttgtccttgctgccccgggtgcaattgc
atcaaaaaatgtctaaaaatatgtggtccaaaacaatccagcctatgctggaagtttatg
tttacggatgaacggaactgtgattgttgctactgccctcatgaagatgacaccagctgc
cagtgctttcactgtgcgttctcagaaagccccaattgtcgctggtgctgctgctcctgt
gctaataatagaaattgcaagtgcttgtgctgtaccgaggaaaataatgaatgtcagtgt
tatgaaagtaggtgttgcacttttccgtatttgccatacagacgtggagctaaattacga
aaaagccgaggggcaagtgatacatctgtcattacattggataaagaaccttctggacat
gcttttattgaccagcttgtatgcccattgtgccagcgaatgtttctccgcccatttatg
ttgccttgtaatcactgcatttgtgatagatgtatcatgcagagcagactgaatgctgaa
attacagagagtttctacatcatcacatgtccaatctgcaacagagcacattgcctacca
ttttctaagaaaatgtatctgaggattaattatttaagggcaagattggccagaaagtat
atgcgccgatatggtttcctaagatggagatttgacaaaagctatgtcccaatctattgc
cagatttgtgatgagcagaaggcggacaagagatgtttgtcatgtcagctgaactactgt
aatctttgcttgagaaattatcaccaagatatttcttccttaaatcatgtctatgctaaa
attagcgatgacatctgggaagataaaacctgcttaatccatggtgaaacaatgctttcc
aaatactgccttgaagatcacgaactactatgtgaattttgtgctgaggctcaacatagc
gatcacaacaaggtttctttatcagtagcatgtacaaaaatgtctgctatgttatttaca
actattgcaaagtttaaaaaagtccgttatgtaatcgataatgacctaatggaagtcctt
gtattaaaaaataattttaaatcttacaaagaaaccaaaaggaaagagatcaggaatggt
tttatgaggttacggatgataattcaagagcgtgaaaaagaactgatggaggcagtagaa
aaccttgaacttcagaaacaaaaggcactttttgaattcgcaagccatgcaacaaggaaa
attgatcaaatggacagcctcatgcaatattctaaggaagctttaaaagaacaaagccct
attgcattcctgcaatctgcctggagcttaataaaggaagtagaagatataattgcaagt
ctttatcagcccaatccataccttaaggaagatccaataaagcatcttaaaatcaacttt
gaggagcttgctgaaaacctagtaagcatttttccatcaatccgcaataaattacgatat
gaacaaatgaacaaaagtccttatccttgtggttctgatgtcatgattccaagaactgtt
tcaagtgcacacattccaaatccactaggactgaacagaagtttgtccttatcatcactt
aattcactcccttatcaagcctttatgagtaatgaactgcatattagaccaaaatcatca
ccaccaacagagctgaaagggaatcaattgtattctgtttggaatgccgcatcagatact
tcaaaagatataagaaatgatccaagctacggacccagttacaatccagatatacaggag
gaatcttcttcacctcctggtcttgttgttatttatcaaactcttgtctacccaactatt
gctaagctttattggacctgtccaacagaagaagtagatagctttgaaattgcttattat
gaactactcgatgaagaggcagctgaaagtttaatccagccacaactcataggagtactt
actggaattgtacaacagaatctggaaatacataatctgtcccctaatacagagtatctc
tttaaagttcgagctatcaatgagcatggcccaggagaatggagtgaagtctgtaaggtg
atgactccagatgtgcgtgccaaagccaaagccagatgggggttgctgagaaatgttcaa
tctgctttccgcagataa

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