Notechis scutatus (mainland tiger snake): 113412886
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Entry
113412886 CDS
T09026
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113412886 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nss03021
]
113412886 (SMARCA5)
03036 Chromosome and associated proteins [BR:
nss03036
]
113412886 (SMARCA5)
Transcription machinery [BR:
nss03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
113412886 (SMARCA5)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
113412886 (SMARCA5)
RSF complex
113412886 (SMARCA5)
WICH complex
113412886 (SMARCA5)
B-WICH complex
113412886 (SMARCA5)
NORC complex
113412886 (SMARCA5)
BRF complex
113412886 (SMARCA5)
NuRF complex (fruit fly)
113412886 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
113412886
NCBI-ProteinID:
XP_026524589
Ensembl:
ENSNSUG00000005138
UniProt:
A0A6J1U9X7
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MSALGPENENVSSLSGTASVPSGGMENPGGGPASAEGTPGINDEGTELGDESPGKQKENQ
EPDPTYEEKMQTDRANRFDYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQN
LLSVGDYRHRRTEQEEDEELLTENSKTTNVCTRFEESPSYVKWGKLRDYQVRGLNWLISL
YENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPT
LRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIK
NEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNC
LGDQKLVERLHMVLRPFLLRRIKAEVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI
LNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK
LKEQGSRVLVFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKFV
FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE
ERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKESEITDEDI
DGILERGAKKTAEMNEKLSKMGESSLRNFTVDTESSVYNFEGEDYREKQKMAFTEWIEPP
KRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRK
TIGYKVPRNPDLPNASQNQKEEQIKIDEAEPLNEEELDEKEKLLTQGFTNWNKRDFNQFI
KANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRR
ISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELR
QCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSLTQ
KRKLDGTPDGRGRKKKLKL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgctgggaccggagaacgagaacgtgagctccctttcgggcaccgcttcagtt
cccagcggcggcatggagaacccaggaggggggccggcttccgccgaagggactcccggg
ataaacgacgaaggaacggaacttggtgatgaatctccaggaaaacaaaaagaaaatcaa
gaaccagatcctacatatgaagaaaaaatgcaaaccgatcgagcaaacagatttgactat
ctgttgaaacagacagagttgtttgcacatttcattcagcctgctgctcagaagactcca
acctcacccttaaaaatgaaaccaggaagaccaagaataaaaaaagatgaaaaacaaaat
ctgttatctgttggagactatcgccatcgtagaactgaacaggaagaggatgaggagctt
ttaacagaaaattccaagactactaatgtatgcactcgatttgaagaatctccatcctat
gtgaaatggggaaaattgcgtgattatcaagtcagaggattgaactggctcatttctttg
tatgaaaatggtatcaatggtattttagcagatgaaatgggtcttggaaagacattgcaa
acaatttctcttcttgggtacatgaaacattacaggaacattccaggtcctcatatggtg
ttggttcctaaatcaactttgcataattggatgaatgagttcaagagatgggtgccaact
cttcgagcagtatgtctgataggtgacaaagaccagcgggctgctttcgtgagagatgtt
ttgctgcctggtgaatgggatgtctgtgtaacatcatatgaaatgctcattaaagagaaa
tcagtattcaaaaaatttaactggagatacctagttattgatgaagcccacagaattaaa
aatgaaaagtcaaagttgtcagaaattgtaagagaattcaagactacaaataggttattg
ttaactggaacaccattacagaacaacttacatgaactgtgggcacttcttaatttttta
ttgccagatgtctttaattcagctgaggattttgattcatggtttgatacaaacaactgt
cttggggatcaaaaattagtagaacggcttcacatggtactacgaccatttttgttacgt
cgtataaaagctgaagtagagaaaagtttgcctccaaaaaaagaagttaaaatatatgtt
ggtctcagcaaaatgcaaagggaatggtacacaagaatcttaatgaaggatatagatata
ttgaactctgctggaaaactggataaaatgagactattaaacattcttatgcagttacga
aaatgttgcaatcatccatacctttttgatggagcagagcctggtcccccttatacaaca
gatatgcatttggttaccaatagtggcaaaatggtagttttggataaattgttgccaaaa
ttgaaagaacagggatcacgagtcttagtcttcagccagatgacaagagtgttagatata
ttagaagattactgtatgtggcgaaattatgagtattgcagacttgatgggcagacacct
catgatgaaagacaagcttccattaatgcatataacgaacctggcagttcgaaatttgtc
tttatgctgagcacacgggctggtggtttgggaatcaacctagctacagctgatgttgtg
attctatatgattctgactggaatccacaagtagaccttcaggctatggatcgtgcacat
agaattggccagacaaagactgttagagtattcagatttattacagacaacactgtagaa
gaaagaatagtagaaagagcagaaatgaaacttcgcttagattccatagttattcaacaa
ggaagactagtagatcagaatctgaataaattgggaaaagatgaaatgttgcagatgatt
cgacatggagctacccatgtctttgcttcaaaagagagtgaaattacagatgaagacatt
gacggtattttggaaagaggtgcaaagaaaactgcagaaatgaatgaaaaactttccaaa
atgggtgaaagttcactcagaaactttacagtggataccgaatctagtgtgtataacttt
gaaggagaagattacagagagaaacaaaagatggcattcacagagtggattgagccacct
aaacgtgaaagaaaagctaactatgctgttgatgcttattttagggaagctcttcgtgtc
agtgaaccaaaagcaccaaaggccccgcgacctccaaaacaacctaatgttcaggatttc
caattctttccaccacgtttgtttgaactgttggaaaaagaaattctttattacagaaaa
actattggatataaggtacctcgtaatcctgacttgccaaatgcatctcagaaccaaaag
gaagaacaaattaaaattgatgaagctgaaccgcttaatgaagaagaattagatgaaaag
gaaaaactacttactcagggatttacaaactggaataaaagagatttcaatcagttcatt
aaagctaatgaaaaatggggtcgtgatgacattgaaaatatagctcgagaagtagaagga
aaaactccagaggaagtcattgaatattctgctgttttctgggaacgatgtaatgagctt
caggacatagaaaagattatggcacaaattgaaagaggcgaagctcgaattcagaggaga
attagtattaaaaaagcacttgacacaaagattggcagatacaaagcaccttttcaccaa
ttgagaatatcatatggtactaacaaagggaagaattacacagaagaagaagatcggttt
ttgatctgtatgcttcataaacttggatttgacaaagaaaatgtttatgatgaattgaga
cagtgtattcgaaattctccccagttcagatttgactggtttctcaagtctagaactgca
atggaattacaaagaagatgtaataccttaatcactttgattgaaagagaaaacatggaa
ttagaagaaaaagagaaggcagaaaagaagaaacgtggacctaaaccatctttgacacag
aaacgtaaattggatggtactcctgatggaagaggaagaaaaaagaaactaaagctgtga
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integrated database retrieval system
