Notechis scutatus (mainland tiger snake): 113412910
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Entry
113412910 CDS
T09026
Symbol
PCDH18
Name
(RefSeq) protocadherin-18
KO
K16499
protocadherin delta 2
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nss04515
]
113412910 (PCDH18)
Cell adhesion molecules [BR:
nss04515
]
Cadherins
Protocadherins
113412910 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Syndecan
PepSY
DUF3481
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
113412910
NCBI-ProteinID:
XP_026524635
UniProt:
A0A6J1U2S9
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MPMPRLGRKMHFRLLFALTTVLSCWEGAAGKNLKYRIYEEQRVGSVIARLSEDVADVLYR
LPNPSSVRFRAMQRGNSPLLLVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEH
LQLFHVEVEVLDINDNSPQFSRALIPLEISESAAVGTRIPLDSAFDPDVGDNSLYTYSLS
ANDFFTIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDNGVPQRSGSSLLKISIS
DSNDNSPLFEQQTYIIQLLENSHVGTLLIDLNATDPDEGANGKVVYSFSSHVSPKIIETF
KMDSERGQLTLLKPVDYETSKSYEIDAQAQDLGPNSIPAHCKIIIKVVDVNDNKPEINLN
LMSPGKEEIAYISEKASTETFVALVRVQDKDSGLNGEVVCKLHGHGHFKLQKTYENNYFI
LTNTTLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQIIDENDNSPQFQTNRYEIVILEN
NSPGAYITSVTATDPDLGDNGQVTYTILESFILGSSITTYVTIDPSNGAIYALRTFDHEE
VSLIIFMVQARDGGSQQLASNTTVVLTIIDENDNAPLIVGPALHNNTAEISIPKEADSNH
CITRIRATDRDSGVNAELSCALATSSEEGLFVMDPQTCDIYLNASIESVTSTEWELTVVV
RDKGSPQLSTKALLKCSVVKNIYQLSSTEATYPSQPPLDISMITIISLGAICAVLLVVMV
VFATMCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHKAS
PSSSPTLERGQMSSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLH
QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE
GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFQPQQN
QPPQEEEDHQEVESSEKKKSFSTFGKDNQNMEEAADICTSSLLSEMNSVFQRLLPPSLDA
YTECNEIEPPNSLERRKGHLPAKTVSYPQGVAAWAASTHFQNPANSTGLTLGTHSGAQPS
SKWLPAMEEIPENYEEDEFDNVLNHLSDGKHELMDASELVAEINKLLHDVRQN
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgccgcgtttgggtcgaaaaatgcactttaggcttctctttgcactgacaacc
gtcctgtcctgctgggaaggcgcagcgggcaaaaatctgaaatacaggatttatgaggag
cagagggttggctcggtcattgctagactttccgaagatgtcgccgatgttttgtatagg
ctgcctaatccttcttcggtgcggttcagagccatgcagagggggaattctccgttgctg
ctggttcgggaagacaacggagagatcagcattggagctaaaattgaccgggagcaactc
tgccagaaaaacttaaactgttccatagagtttgacgtgatcactctgccgactgaacat
ctgcagcttttccatgtggaggttgaagtgttggatattaatgacaattcgcctcaattc
tccagagctcttattcctcttgaaatctcggagagtgcagccgtaggtacgcggattcct
ttggatagtgcttttgatccagatgttggggacaattccctctacacatactccctttcg
gccaatgatttctttaccatcgaagttagaacaaggacagatggagccaaatatgcagag
ttgattgtggtgcgggaactggaccgggagctgaaatcaagctatgaactacaactaact
gcctctgataatggtgtacctcagagaagtggatcatctctcctgaaaatcagcatttca
gattctaatgacaatagtccactttttgaacaacagacatacataattcagcttttggaa
aattcacatgttggcacattacttatagatctcaatgccactgatccagatgaaggtgcc
aatggcaaagttgtctactcctttagtagtcacgtgtcccccaaaattatagagactttt
aaaatggactctgaaaggggtcaactaactcttctcaaaccagtggattatgagacctcc
aaatcctatgaaattgatgctcaggcacaagatttgggtccaaattcaattccagctcac
tgcaaaatcattattaaggttgttgatgtgaatgacaacaaacctgaaatcaatttaaac
ctgatgtctccaggaaaagaagaaatcgcttatatttctgaaaaagcatccacagagact
tttgtggcccttgttagagtgcaagacaaagattctggactgaatggagaagtggtttgc
aagcttcatggacatgggcatttcaaacttcagaagacgtatgagaataactatttcatc
ctaacaaatactactttggatcgagaaaagcgatctgaatatagcctgacagtcatagca
gaagacaaaggaactccaagtctttctacagtgaaacattttactgtccagatcattgat
gaaaatgacaactcaccccaatttcagacaaatagatatgaaattgtaattttggaaaat
aattctccaggtgcatatatcacctctgttacagcaactgatccagatctgggagataat
gggcaggtgacttacactatcttggaaagttttattttgggaagttccataacaacatat
gtgaccattgatccctctaatggagccatctatgcacttaggacttttgatcatgaggaa
gtaagcctgataatctttatggttcaagctagagatggaggaagtcaacagttagctagc
aatacaacagtggtactaactattattgatgaaaatgataatgctcctttgattgtgggg
cctgcactgcacaacaatacagcagagatttcaatccctaaagaagctgacagtaaccat
tgcatcactaggataagagccacagatagagactcaggggttaatgcagagctaagctgc
gcattagcaactagcagtgaagaaggcctctttgtgatggatccacagacatgtgacatt
tatcttaatgctagtattgaatctgttacatcaacagaatgggaacttactgtggttgtt
agggacaaaggaagtcctcaactgagtaccaaagcacttctgaaatgcagtgttgttaaa
aatatctatcaactttcatctacagaagccacatacccaagccaacctcctctagatatt
tccatgatcacaataatatccttaggagcaatatgtgcagttttgttggtggtcatggta
gtctttgctacaatgtgtaatcgtgagaagaaagacacccggtcttataattgtcgtgtt
gcagaatccacataccagcatcatcccaaaaggccatcaagacagattcacaaaggggat
attacattagtgcctaccattaatggtactttaccaatcagatcccaccacaaagcttca
ccttcatcatctccaacactagaaagagggcaaatgagcagtcgacaaagccatcacagt
caccagtctttaaatagtctggtgaccatctcatcaaatcatgtaccagagaatttctct
cttgagctcactcatgctactcctgctgttgaggtgtctcagctgctctccatgcttcat
caaggccaatatcaaccaaggccaagttttcgaggcaacaagtattccagaagttacaga
tatgcccttcaagatatggataagttcagcctgaaagatagtggtcgtggtgacagtgaa
gcaggagacagtgattatgatttagggagagattctcctattgacagacttcttggagaa
ggattcagtgaccttttccttacagatgggagaattcctgcagcaatgagattatgcaca
gaggaatgcagagtccttgggcattctgaccagtgctggatgccacccctgccttcccca
tcttctgactatagaagcaatatgtttataccaggagaagaatttcagcctcagcaaaac
cagccaccacaagaggaggaggatcatcaggaggttgaatcatctgaaaagaagaagagc
ttttcaacttttggcaaagacaatcagaatatggaagaagcagctgacatatgtacctca
tctctcctctctgaaatgaacagcgtctttcaacgtctcttgcctccttctttggatgct
tacacagagtgtaatgaaatagagcctcccaactcactagaacgcaggaaaggacatttg
ccagccaagactgtaagctatccacaaggggtggcagcctgggcagccagtactcatttt
caaaaccctgcaaacagcactgggcttactttgggaactcattcaggtgcccagccctct
tcaaaatggctacctgccatggaggaaattccagagaactatgaagaagatgagtttgac
aatgtgcttaaccacctcagtgatggtaaacacgaactcatggatgctagtgaactggtg
gcagaaattaacaagctgctacatgatgtccggcagaactag
DBGET
integrated database retrieval system
