Notechis scutatus (mainland tiger snake): 113413005
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Entry
113413005 CDS
T09026
Symbol
CNTN1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113413005 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nss04515
]
113413005 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nss00537
]
113413005 (CNTN1)
Cell adhesion molecules [BR:
nss04515
]
Immunoglobulin superfamily
Contactins
113413005 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nss00537
]
Others
113413005 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Tissue_fac
Interfer-bind
DUF4998
GFA
Motif
Other DBs
NCBI-GeneID:
113413005
NCBI-ProteinID:
XP_026524788
Ensembl:
ENSNSUG00000013368
UniProt:
A0A6J1U8G4
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MKLRASTNYFVAFFLFFYLAGLKYSTAIGSNVRDTIHGITVHIRDELKGYGPIFEEEPID
TVYPEESPDAKVSMNCRARGIPTPTYKWQRNNWDVDIKVTKEHYSMVGGNLEINNPEKSR
DEGTYVCIAYNIHGTIRSREATLNFGYYYHPRVQLHPFPPGSISGTSSTQRIQHAANCRR
QHSTGRRLTSSVGPGRSLATGTHHLVSNYESTSRSLLSRFCAECCRGWTFSIGSDVGVTA
PGSKGYVPDIRVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPKPSSADISMSGAV
LKIFNIQFEDEGIYECEAENYRGKDKHSAKVYVQAHPEWVEHINDTERDIGSEFHWPCIA
TGKPIPTIRWLKNGLPYWKGDLRFLSLKLEDSGMYQCVAENIHGMIYSNAELKVIVLPPT
FEFCPMKKDVLAAKGGQAIIECKPRAAPKPKITWSKGTEILRNSTRIHIWYDGSLEIINV
TAVDAGNYTCFVENNKGKANSSSALIVTAATRITLAPTNVDVTVGLNATMQCLASHDPSL
DLTFIWLLNGYPINVDKESDYYERSIMIKDNGELIVKNAQLRHAGRYTCVAQTIVDNATA
SADLVVRGPPGPPGGLKVEDIKNTSVMLTWSRGIENHSPISNYTIQSRTFLSEYWKDMKT
DPSIVDGNAESAKVIDLIPWMEYEFRIMATNILGTGDPSIPSQKIRTEGSPPNVAPSEVG
GGGGSNRELTITWVPLPKEYHFGNNFGYVVAFKSFDQNDWKSVTVPQPEIGRYVHKDESM
LPSSKYQVKVKAFNNKGEGPFSLTAIIYSAEDAPTERPRNVQIKVLSSTEVSVSWEHIFN
PAVTGYEISYWSSSEKEIAANRVQVSSQNFSVMLENLKPYTKYYTKVAAFNAAGIGPYTY
PLDFVTEKAPPRQQPRIINAVRSGSKYIITWEHVKSQSNESTVKGYKVLYRPDGQFNGTL
FKTGNHYIEVPAPIKGQYVVEVRVHSEGGDGEVAHVKIPGAAAGLLPSCIGLLLPALGIL
IFWEF
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgagagcttcaaccaattattttgttgcattttttttatttttttatctggca
ggcctgaaatactcaactgctattggaagtaatgttcgtgatacgatacatggaatcaca
gttcacatacgagatgaactaaaaggttatggaccaatttttgaagaagagcccattgat
acggtatacccagaagagtctccagatgcaaaagtgtcaatgaactgcagagccagagga
atccctacacctacttacaagtggcaacgcaacaactgggatgttgatattaaagtgaca
aaagaacattacagtatggtaggaggtaacctggaaatcaataatcctgagaagtcaagg
gatgaaggaacatatgtttgcatagcatataatatacatggaactataagaagccgggaa
gcaacgttaaactttggatattactaccaccctcgtgtccaattacatcctttcccccct
ggatccattagtggaacgtccagcacccagcgtatccaacacgctgctaattgccgcaga
cagcactcgacaggtcggcgtctgacgtcatcagttggtccgggccgttcgttggcaacc
ggcactcatcatctcgtcagcaactatgagtccacatctcgctcgctactctctaggttc
tgcgccgaatgctgcagagggtggacgttcagcataggatcagatgttggtgtcacggct
ccaggatcaaaaggctatgtgccagatatcagagtgaagttcaaagatacatatgcactt
ttaggacaaaatgtgacgctagaatgctttgcacttggaaaccctgttcctgagcttaga
tggagtaaatatcttgaaccaaagccaagcagtgcagatataagcatgtctggtgcagtt
ctaaagatcttcaatattcagtttgaagatgaaggaatatatgaatgtgaagctgaaaat
tacagaggaaaggataaacattcagcaaaagtgtatgttcaagcacatccagaatgggtg
gaacatattaatgataccgaaagagatattggcagtgaattccattggccatgtatagct
acaggcaagcctattccaacaatccggtggctgaaaaatggattaccgtattggaaagga
gatttgagatttcttagcctgaagcttgaagattcaggcatgtatcaatgtgtagcagaa
aatatacatggaatgatttattcaaatgctgaattaaaagttattgttttacctccaacc
tttgaattctgcccaatgaagaaagatgttttagctgcaaaaggagggcaggctataatt
gagtgcaagcctagagcagctcctaaaccaaaaattacctggagtaaagggacagaaatt
cttagaaattcaaccaggatacatatatggtatgatggcagcctagaaattattaatgtt
acagcagtcgatgcaggcaattacacctgctttgtggaaaacaacaaaggaaaagctaac
agttcttctgctcttatagtcacagctgcaacaaggataacattagcaccaactaacgtt
gatgtcactgttggattgaatgctaccatgcaatgtcttgcatcccatgatccttcttta
gacctgacttttatttggctcttaaatggatatccaataaatgttgataaagagagtgat
tattatgaaagatctatcatgataaaagacaatggtgaacttattgtcaagaatgcccag
ttgcgccatgctggaagatacacatgtgttgctcagacaattgttgataatgccacagct
tcagctgatcttgttgtgagaggacccccaggacctcctggtggactcaaagtagaagat
attaaaaatacatctgtaatgcttacatggagtcgtgggatagaaaaccatagtcctata
tcaaattacactattcagtcaaggacttttctgtccgagtattggaaagacatgaaaaca
gatccttccattgttgatggaaatgcagaatccgcaaaagttattgatttaattccatgg
atggaatatgaatttcgtataatggccactaatattttagggacaggagaccctagtata
ccatcacagaaaattagaacagaaggatctcctccaaatgtggccccttctgaggttgga
ggaggaggtggaagcaacagagaactgacaataacatgggtgcctttgccaaaagagtat
cactttggtaataattttggatatgtggtagctttcaagtcgtttgatcaaaatgattgg
aaaagtgttacagttcctcaacctgaaattggtcggtatgtccataaggatgaatcaatg
cttccttcatcaaagtatcaagtaaaggtgaaagcatttaataacaaaggagaaggacct
tttagtcttactgctattatctattcggcagaagatgctcctactgaaaggcctagaaat
gtacaaataaaagttctgtcatccacggaagtatctgtttcctgggagcacattttcaac
ccagctgttactgggtatgagatcagttactggtccagcagtgaaaaagaaatagctgca
aatagagtgcaagtgagcagtcagaatttttcagtaatgttagaaaacctgaagccttat
acaaaatactatacaaaagtggcagctttcaatgcagctggcattggaccttacacttat
cctttggattttgttacagaaaaagcacctccaaggcagcaaccaagaattatcaatgct
gtaaggtctggttcaaagtacatcatcacgtgggaacatgttaagtcacagtccaatgaa
tctactgtgaaaggatataaagtgctctatagaccagatggtcaatttaatggtacactc
tttaagacgggtaaccattatattgaagttcctgcacctattaaaggacagtacgttgtt
gaagttcgggtccacagtgaagggggagatggagaagtcgctcacgtgaaaattccagga
gctgctgctggactattacctagctgtattggtttattgttgcctgcccttggtatcctt
atcttttgggaattctga
DBGET
integrated database retrieval system
