Notechis scutatus (mainland tiger snake): 113413116
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Entry
113413116 CDS
T09026
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04510
Focal adhesion
nss04512
ECM-receptor interaction
nss04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113413116 (TNR)
04518 Integrin signaling
113413116 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113413116 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nss00536
]
113413116 (TNR)
Glycosaminoglycan binding proteins [BR:
nss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113413116 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Tenascin
EGF_Teneurin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_Dep-1_2nd
FN3_Tor_3rd
Fn3_VIN3
EGF_2
Interfer-bind
DUF7949
Bim_N
Lzipper-MIP1
TSC22
Motif
Other DBs
NCBI-GeneID:
113413116
NCBI-ProteinID:
XP_026524938
Ensembl:
ENSNSUG00000013667
UniProt:
A0A6J1U8W7
LinkDB
All DBs
Position
Unknown
AA seq
1356 aa
AA seq
DB search
MRADGENVILRNVLVSLNIMLLVSIFRPFECHLEVMTERVKKQVTDEEGSFANYTSPIKE
QPMVFSHIYNINVPLDSLCSSSLEASSDPEVSSEDDRMTEYTEQTSDSESQVTFTHKINL
PKQTCKCAASSRDLQELLSRIEMLEREVSILRDQCNSNCCQENAATGQLDYLPHCSSHGN
FSLETCGCICDEGWAGKNCSEPLCPLGCSSRGVCIDGQCICDNDYSGEDCSEARCPTDCS
SRGLCVDGECICEEGFAGEDCNELRCPEDCSGKGVCANGTCICQEGYVGEDCGQLRCLNA
CSGRGFCQEGLCSCEEGYQGRDCSAVAPPESLQVAAVRDQSIDLEWDGPMAVTEYVISYQ
PAVPGGLQLQQRVPGDWSTVTLKELEPGLTYNISIYAVISEVLSAPVGVKVATQLSTPRG
LQFKTITETTVEMEWEPFSFPFDGWEISFIPKDNEGGVIAQLPSSMTTFNQTGLKPGEEY
TVNVVALKEQARSSPTSASVSTLIDGPTQILVRDVSDTVAFVEWSPPRAKVDYILLKYGL
ENEEGGKSTFRLQPPLRQYSMQALRPGSPYEVSISAVRGANESDAAITHFVTEIDAPKNL
RVLSRTSDSLHLEWDNSEAEVENFKVVYSTLAGEQYHEVLVPRNAGATSKATLTDLVPGT
EYGIGISAIMNNKQSVPATMNARTELDSPHDLIVTASTETSISVSWTKVKGPIDHYRVIF
MQASGMASEVTVSKDKSELTLTDLEPGTEYTISVIAERGRQQSLESTVDAFTGFRPITQL
HFSRVTSSSVNITWNDPSPPADRLILTYSPKDKEETKEVMLDPTKRHAALSGLQPSTEYI
MSLVAIHGLVSSEPIVGSVTTGIDPPKNLTVLNVTTESVAIHWAPPIAPFDHYKISCKSA
QGRVDNIVVAKGITEYTLNYLQPSTEYEISLKSIRGREESEPLLHTMYTAMDHPKNLIAV
NITPTETLLKWDPPGVEAENYVIVLTHDSVAGETILVDRTEQEYKLIDLLPSTSYKVTMY
AINGPVTSRTIFTNFTTLLDPPSILIASEVTRRSALLSWLPPVAEIENYIMTYRSPDGSR
KELIVDAEDTWIRLEGLSENTEYTVYLQAAQDAVRSGSISTIFTTGGRVFMNPQDCAQHL
INGDNLSGVYTISLNGDLSQRVQVYCDMTTDGGGWIVFQRRQNGLTDFFRKWADYRIGFG
NLEDEFWLGLDNMHKITSQGRYELRIDMRDGQETTFAYYNKFSIGDARSLYKLRIGEYNG
TAGDSLSYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGIN
WYHWKGHEFSIPFVEMKMRPYNHRNSLGRKRRSVQL
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgagggcggatggtgaaaatgtgatcctaagaaatgttctggttagcctcaatataatg
ctgttggtgtccatcttcagacccttcgagtgccacctggaagtgatgacagagagagtt
aaaaaacaggtgactgatgaagaaggcagctttgccaactacacatcccctatcaaagag
caacccatggtcttcagccatatatacaacattaatgtgcctctggacagcctctgctcc
tcatccctagaggcctcatctgacccagaggtgagttcggaagatgaccggatgacggaa
tacaccgagcagacctcagacagtgagagccaggtcaccttcacccacaagataaacctc
cccaaacagacttgcaagtgtgccgcctcctcccgggacttacaagagctgctgagcagg
attgagatgctggaaagggaggtttctatactccgagaccaatgcaactccaattgctgt
caagaaaatgcagccacagggcagttggattacctcccccattgcagcagtcatggtaac
tttagcctggaaacctgtgggtgcatctgtgatgaaggctgggctgggaagaattgctct
gagcctctctgtccccttggctgctctagccggggtgtatgcattgatggccagtgtatt
tgcgacaacgattatagtggggaggattgctccgaggcacgttgcccaactgactgcagc
tcccgaggactctgtgtggatggagagtgcatctgtgaagaaggctttgccggagaagac
tgtaacgagctcagatgcccagaggactgctcagggaagggagtctgtgccaatgggact
tgcatctgccaagagggctatgtaggggaagattgtgggcagctgaggtgcctcaatgct
tgcagcgggcgtggattctgccaagaaggcctgtgctcttgcgaggaaggttaccaagga
cgggattgttcagcagttgctcctcctgagagtctgcaagtggctgcagtcagagaccaa
tcaattgacctggaatgggatggcccaatggctgtgactgaatatgtcatttcctaccag
ccagctgtaccagggggcctgcagctccagcagcgggtgccaggtgactggagcactgtc
actctgaaggagttggagccaggcttgacatacaacatcagcatctatgctgttatcagt
gaagtgctcagtgcccctgttggagtcaaggtagccacccaactctctactccacgagga
ctgcagttcaaaactatcacagagactactgtggagatggaatgggaacccttctccttc
ccctttgatggctgggagatcagtttcatccccaaggacaatgaagggggtgtgattgct
caacttcccagtagtatgacaaccttcaatcagacgggcctgaaaccaggtgaagagtac
acagtcaatgttgtagctctcaaggaacaagcccgaagttcacccacttcagccagtgtt
tcaaccttaattgatgggccaacccagattttggttcgtgatgtctctgacactgtggcc
tttgttgaatggtctccaccccgggctaaagtggactatattctactgaaatatggccta
gagaatgaggaagggggaaagtccactttccgattgcagcctccactgaggcagtattcc
atgcaagctttacgacctggctcgccatatgaagtctctatctctgctgtccgtggtgct
aatgagagcgatgctgcaatcacccactttgtaacagaaattgatgctccgaagaattta
cgtgtactctcccggacatcagacagcctacatcttgaatgggacaatagtgaggcagaa
gtggaaaacttcaaagtggtatacagcaccctggctggtgagcagtaccatgaagttttg
gtgccacgcaatgcaggtgccacatccaaagccaccctcactgatttggtgccaggaaca
gaatatggaattgggatttcagctataatgaataataagcagagtgttccagccaccatg
aacgcgagaactgagttggacagccctcatgacctgattgtgacagcttccacagaaaca
tccatctctgtgtcctggaccaaagtcaagggtcccattgatcattatcgggtcatcttc
atgcaagcttcaggaatggcatcagaggttactgtctctaaagataaatctgagcttaca
ctcacagacttagaacctgggactgaatacactatctcggtcattgctgaaaggggccga
cagcaaagcttggaaagcaccgtggatgccttcacaggattccgaccaatcacacaactt
cacttttctcgtgtaacttcctccagcgtgaacatcacttggaatgacccctcacctcca
gctgataggctgatactgacctacagccccaaagataaggaggaaaccaaggaagtgatg
ctggaccctacaaagagacatgctgctttgtcaggtctacaaccatccacagagtatatc
atgtccctggtggctatacatggccttgtcagctctgagccaatagttggttcggtcaca
acagggattgatccaccgaagaacttgaccgttctcaatgttactacagaatctgtggct
atccattgggcacctccaattgcaccttttgaccactataagatttcatgcaaatctgcc
caaggacgagttgacaatatagttgttgcaaaaggtattactgaatatactctcaactac
ttgcagccttcaactgaatatgaaatcagcctaaagagtataagaggcagagaggaaagt
gaaccacttttacataccatgtatacagccatggatcatccaaagaatttgattgccgta
aacattaccccaacagaaaccttgctaaagtgggacccgcctggggttgaagctgaaaat
tatgtcattgtgcttacccacgacagtgttgcgggagaaactattttggtggacaggacc
gaacaagaatataagcttattgatttgcttcctagtaccagctataaagtcaccatgtat
gccatcaatgggcctgtcacaagtagaaccatcttcaccaactttactactcttttggat
ccgccatcaattcttatagcaagtgaagtgactcggcgaagtgctcttctttcatggctt
cctcctgtagctgagattgagaactacatcatgacatacagatcccctgatgggagccgc
aaggagctgattgtggatgcagaagatacttggatccgcctagaaggcctttctgaaaat
acagagtacactgtgtacctgcaagcagctcaagatgctgtgaggagtggatctatctcc
actatcttcactacaggaggccgtgtgtttatgaatcctcaggactgtgcccagcatttg
atcaatggtgacaatttgagtggcgtttacaccatttcccttaatggggatctcagccag
agagtgcaagtatactgtgatatgactacagatggcggtggatggattgtcttccagaga
agacagaatggattgaccgatttctttcgcaaatgggcagactatcgcattggctttgga
aacctggaggatgagttctggctggggttagataatatgcacaagatcacatcacaaggg
cgctatgaactgcggatagatatgagagatggtcaagaaacaacttttgcctattataac
aagttttccattggagacgccaggagtctctacaagctccggataggggaatataatggc
actgctggggattcactcagctatcatcagggacgtccattttccaccaaagacagggac
aatgatgttgccgttacaaactgtgctatgtcatacaaaggggcctggtggtataaaaac
tgccatcgaactaacctcaatggtaaatatggtgaatcccggcacagccagggtattaac
tggtaccattggaaaggacacgagttctccataccttttgtggaaatgaaaatgcggcca
tataaccatcgcaactccctcgggaggaaacgccgatcagtacaactgtga
DBGET
integrated database retrieval system
