Notechis scutatus (mainland tiger snake): 113413142
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Entry
113413142 CDS
T09026
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04115
p53 signaling pathway
nss04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113413142 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
113413142 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nss04121
]
113413142 (COP1)
Enzymes [BR:
nss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113413142 (COP1)
Ubiquitin system [BR:
nss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113413142 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113413142 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
Beta-prop_CAF1B_HIR1
zf-RING_2
zf-RING_UBOX
Beta-prop_EML
Beta-prop_DCAF4
zf-C3HC4_3
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
WD40_RFWD3
RING_XB3-XBAT31
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
113413142
NCBI-ProteinID:
XP_026524977
Ensembl:
ENSNSUG00000013677
UniProt:
A0A6J1U223
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MSGSRPSPQHPPAGPGAAGPPASSSTSSVTTSACLGTAMATGTAMATGSSAVPSRPVLVA
AAVSGSSCGGGLSRLAGTRVGSGNGAACSGTRKRPLLTPLCNGLLNSYEDKSNDFVCPIC
FDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQR
FEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLNLANVNLMLELLVQKKKQLEAESHAA
QLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPS
PSHSSIIDSTEYSQPSGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRL
SDDSRTSNQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIA
GVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWD
GFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVC
CVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTD
SQLKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFK
FDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaagcaggccatcgccgcagcaccctccggccgggccgggtgctgcgggccct
ccggcctcctcctcgacctcctcggtcaccacctcggcctgcttgggcaccgcgatggcg
acgggcaccgcgatggcgacgggctcctcagcggtcccctcgcgacccgtgttggtggcg
gccgccgtgtccggatcctcctgcggcgggggtctttctcgcctggcggggacccgagtc
gggagcggcaatggagcagcctgcagcggcaccagaaagaggccgcttctgactccgctt
tgcaacggccttctgaattcctacgaggacaaaagcaacgatttcgtctgccccatctgc
tttgatatgattgaagaagcttacatgacaaaatgtggacacagtttctgttataaatgt
attcatcaaagcctggaagataacaacagatgccccaaatgcaattatgttgtggataac
attgatcatctatatcccaactttttagtgaatgagctcatccttaaacagaagcaaaga
tttgaggaaaagagattcaaattggaccattcagtgagtagcaccaatgggcacaggtgg
caaatatttcaagatttgttgggaacagaccaagacaatcttaatttggccaatgttaac
ttaatgttggaacttttggtgcagaagaaaaaacaactggaggcagagtcccatgctgcc
cagctacagattttgatggaattcctcaaggttgccaggagaaataagagagagcagtta
gagcaaatccagaaggagctgagtgttttggaagaagatattaaacgagtagaggagatg
agtggtttgtattcaccagtcagtgaagacagcactgtgccccagtttgaagctccatct
ccttcacacagtagcattattgattctacagaatatagccaaccttctggatttagtggc
agttcccagactaagaaacagccatggtataatagtactttagcttcaagaaggaagaga
cttacagctcattttgaagatttggaacaatgctacttttctaccaggatgactcgtcta
tcagatgatagtagaacctcaaaccagctggatgaatttcaagagtgcctgtctaaattt
actcgctacaattctgttcgacctttggcaacactatcttatgcaagtgatctctacaac
ggatctagcatagtctcaagtattgaatttgatcgagactgtgactattttgctattgcg
ggagtcacaaagaagattaaagtctatgaatatggcacagtcattcaggatgcagttgat
attcattatccagaaaatgaaatgacatgtaattccaaaatcagctgtatcagctggagt
agttaccacaaaaaccttttggccagcagcgactatgaaggaacagtgatcttatgggat
ggattcacagggcaacgttccaaagtctatcaggagcatgagaaaagatgctggagtgtg
gactttaatttgatggatcctaaactcttggcttcaggttctgatgatgcaaaagtgaag
ttgtggtcaaccaacctggacaattcagtagcaagtattgaggccaaggcaaatgtgtgt
tgtgtaaaattcagcccctcatcccggtaccatcttgcttttggctgtgcagatcactgt
gtccactactatgatcttcggaacactaaacagcccattatggtcttcaaagggcaccgc
aaagctgtttcatatgcaaagtttgttagtggagaagaaatagtctctgcgtcaacagat
agccagctaaagctatggaatgtagggaagccacattgtttgcgttcttttaagggtcac
atcaatgagaagaattttgtaggcttggcatctaatggagactatattgcctgtggaagt
gaaaataattcactttacctgtactataaaggtctctcaaagacactgctaaccttcaaa
tttgacactgtcaaaagtgtcctggacaaagaccgtaaggaggatgacacaaatgagttt
gtcagtgctgtatgctggagggcactaccagatggggagtccaatgtattgattgctgct
aacagtcagggtacaattaaggtactggaactggtatga
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integrated database retrieval system
