Notechis scutatus (mainland tiger snake): 113413247
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Entry
113413247 CDS
T09026
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04114
Oocyte meiosis
nss04120
Ubiquitin mediated proteolysis
nss04218
Cellular senescence
nss04310
Wnt signaling pathway
nss04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113413247 (BTRC)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113413247 (BTRC)
04340 Hedgehog signaling pathway
113413247 (BTRC)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
113413247 (BTRC)
04218 Cellular senescence
113413247 (BTRC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nss04121
]
113413247 (BTRC)
03036 Chromosome and associated proteins [BR:
nss03036
]
113413247 (BTRC)
Ubiquitin system [BR:
nss04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113413247 (BTRC)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113413247 (BTRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
WDR55
Beta-prop_EML_2
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IP5PC_F
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_DCAF4
F-box
WD40_like
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR11_2nd
WD40_RFWD3
Beta-prop_VPS8
F-box_5
Beta-prop_NWD2_C
DUF1513
DUF4508
Motif
Other DBs
NCBI-GeneID:
113413247
NCBI-ProteinID:
XP_026525169
Ensembl:
ENSNSUG00000006609
UniProt:
A0A6J1U3B5
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MDPAEAVVQEKALKFMPRIHMPKDGFQLTASGYQAWLKQCSMPRSLWLGCSSLADSMPSL
RCLYNPGTGTLTTFQTSSEREACNNEEPPRKIIPEKNALRQAYNNCTRLCLNQDTVCLGT
TMKTENCVAKTKLTNGTSSMIVPKQRKLSASYEKEKELCIKYFEQWSESDQVEFVEHLIS
QMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENILSYLDAKSLCSVELVCKEWYRV
TSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYIFRNKPPDGIIPPNSFYRALYPKIIQD
IETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRI
LTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFHNGMMVT
CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEF
VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDSKR
IVSGAYDGKIKVWDLLAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTIL
IWDFLNDPAMQAESNCSPSRTYTYISR
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgccgaggctgtggtgcaagagaaagccctgaaattcatgccacgaatacac
atgcctaaagatggattccaacttacagcttcaggataccaagcatggctaaagcagtgt
tctatgccccggtctctttggctgggctgctccagcctggcggacagcatgccctcactg
cgatgcctgtataacccagggactggcacactcacaactttccagacttcctctgaaaga
gaagcttgtaataatgaagagcctcccagaaagatcattcccgagaagaatgcactcagg
caggcctataacaactgtaccagactttgcttaaaccaagacacagtctgcttaggtact
acaatgaagactgaaaactgtgtggccaaaacaaaacttaccaatggtacttcaagcatg
attgtgccaaaacagagaaagctgtctgcaagttatgaaaaagaaaaggagctctgtatc
aagtattttgagcagtggtcagagtctgaccaggtagaatttgtggaacatctcatctct
cagatgtgtcattatcaacatgggcacataaattcatacttgaaacctatgttgcagagg
gacttcattacagcattaccagctcgaggcctggatcacattgctgagaatattctatca
tatttggatgccaaatctttgtgttctgttgaactagtatgcaaggaatggtaccgggtg
acgtctgatggtatgctgtggaagaaattgattgagaggatggtccgtaccgactcattg
tggaggggtttggcagagcgaagaggatggggacaatatatttttagaaacaaaccacct
gatgggataataccaccaaattcattttacagagcactttatcccaaaattattcaagat
atagagacgatagaatcaaactggcgttgtggaaggcacagcttacaaagaatccactgc
aggagtgaaactagcaaaggtgtttactgtttacagtatgatgatcagaagatagtgagt
ggtctacgagacaatacgatcaagatctgggacaaaaataccctagaatgcaagagaatt
ctgactggacacaccggatcagtcctttgtctccagtatgatgagcgagtaatcatcact
ggatcatcagattccactgtcagagtatgggatgtaaatactggtgagatgctcaacacc
ctgatccatcattgtgaagcagtactgcacctgcgctttcataatgggatgatggtgaca
tgttctaaagatcgttccattgctgtttgggacatggcctccccaacagacattacttta
cgaagagttctggttggacacagagcagccgtcaatgtggtagactttgatgacaaatac
atcgtgtcagcctcaggagatagaactataaaggtgtggaacacaagtacctgtgagttc
gttcgtaccttaaatggccacaagcgtggcattgcatgtctacaatatagagatagacta
gttgtcagtggttcatctgataatacaattaggttatgggacattgaatgtggggcctgt
ttgcgagtcctggaaggccatgaggaactggtgaggtgcattcgcttcgatagcaagagg
atagtcagtggagcctatgatggaaaaattaaggtatgggatctgttagctgcactcgat
ccccgtgcccctgctggaaccctctgcctacgcactcttgtggaacattctggcagagtt
tttcgactccagtttgatgaatttcaaattgtcagcagctcacatgatgatacgatcctt
atctgggacttcctgaatgatccagctatgcaagcggaatcgaactgttccccatccaga
acgtatacttacatatccagataa
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