Notechis scutatus (mainland tiger snake): 113413318
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Entry
113413318 CDS
T09026
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113413318 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nss03021
]
113413318 (TAF5L)
03036 Chromosome and associated proteins [BR:
nss03036
]
113413318 (TAF5L)
Transcription machinery [BR:
nss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113413318 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
113413318 (TAF5L)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113413318 (TAF5L)
STAGA complex
113413318 (TAF5L)
TFTC complex
113413318 (TAF5L)
SAGA complex
113413318 (TAF5L)
SLIK complex
113413318 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_WDR19_1st
PEP5_VPS11_N
PROPPIN
WD_LRWD1
Ge1_WD40
Beta-prop_IP5PC_F
Mala_s_1-like
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
113413318
NCBI-ProteinID:
XP_026525246
Ensembl:
ENSNSUG00000002779
UniProt:
A0A6J1U2U4
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MKRVRTEQIQMAVSCYVKRRQYVDSEGPLKQGLRLCHTAEEMAANLTVQSESGCTNVISA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSQEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTLTIQDILSNFKLRALLDNKYVIRLQEDSYNFLLRYLQ
SDNNSALCKVLSLHIHLDVQSAKRVDYQLYASGGSSRSESNGLEPTDMPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNNEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRPK
KLKSEPHLVDISRIHLACDILDEEAEDDDDDIGTEMKLLRGHSGPVYSTSFLSDSSGLLS
CSEDTTIRYWDLGCFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPL
RIYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNTVRLFTGHRGPVLSLAFSPN
GKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI
RNTYCNAPVDGSSSELVGVYTGQISNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgtacgcaccgaacagattcagatggctgtttcctgctatgtcaagcgcagg
cagtacgtagactcagaaggtcccctgaaacaagggctgcgcctatgccacacagctgaa
gaaatggctgctaatctgacagtacaatctgaatcgggttgtacaaatgtgatttctgcc
gcaccctgcttagcagagccccaacaatatgaagtacagtttgggcggttgcgcaacttt
ctgacagattcagattcccagcatagccaggaagtgatgcctctcctgtatcctctcttt
gtctacctccatctcaacatggtccaaaatggcctaaagagcacagtggacagtttctac
agtcgcttccatgggatgttcttacagaatgccagtcagaaagacataattgaacagtta
caaactacattaacaattcaagacatcctgtccaatttcaaacttcgggcacttctggac
aataaatatgtgatccgccttcaggaagacagctacaacttcctcctccgctacctccag
agtgataataacagtgctctctgcaaagtcctgtccttgcatattcacctagatgtgcaa
tccgctaagagagtggactatcagctctatgctagtggtggctcttcacgcagtgagagc
aatggcctggaacctactgacatgcctgcttccatcctgcagaatgaagcagccttggac
ctcctgcaagatagcattaaaagagtcaaagatgggccaccatcccttactaccatatgt
ttctatgcattctataataatgagcagttgctgaatacagcagagatctcgccaaatagc
aagctgctggctgctggctttgacaattcctgtgtgaagctgtggagcttgcggcccaag
aagctgaaatctgagcctcacttagtagatatttcccgaatccacttggcctgtgatatc
ttggatgaagaggctgaagatgatgatgatgatataggaactgaaatgaagttattaaga
gggcactctggaccagtgtatagcacaagttttttgtcagacagttcaggattgctgtca
tgctctgaagatacaactatcagatactgggaccttggatgttttacaaacactgtcttg
taccaaggacatgcttatccggtgtgggacttggacatcagcccttgcagcttgtacttt
gctagtgcttctcatgaccgtacagcaagactctggtcatttgatcggacgtatccccta
cggatatacgcgggccatttagcagatgtcgactgcatcaagtttcatccaaattctaac
tacttggcaacaggatctacagacaaaacagtgcggctctggagcacccagcaaggaaac
acagtgcgtctgtttacaggtcaccggggtccggttctgtcccttgccttttctcccaat
ggtaagtacttggcctcagcaggtgaagaccagcgcttaaaattgtgggacttggcatct
ggaacgctttacaaagaactgcgggggcacacagataatatcaccagccttacttttagt
ccggatagtagtttgattgcttctgcatcaatggacaactctgttcgagtttgggatatt
cgaaacacttactgcaatgctcctgtagatggctcttccagcgagctagttggagtatat
actggacagatcagcaatgtactgagtgtacagtttatggcctgtaaccttcttttagtg
actggaattgcacaagagaatcaggaacattag
DBGET
integrated database retrieval system
