Notechis scutatus (mainland tiger snake): 113413596
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Entry
113413596 CDS
T09026
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nss03016
]
113413596 (CDKAL1)
Enzymes [BR:
nss01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
113413596 (CDKAL1)
Transfer RNA biogenesis [BR:
nss03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
113413596 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
113413596
NCBI-ProteinID:
XP_026525765
UniProt:
A0A6J1U4R0
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MIAADDLCLEDIEDIVSAQDPKPFDRQFSRKNIIPKVRKRQLQKNVEVDDPPPRDSVIPG
IQKIWIRTWGCSHNSSDGEYMAGQLAAYGYSITENAAEADLWLLNSCTVKSPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQDYLQGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KGNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYPIEELVNRG
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHVPVQSASDSVLMDMKREYCVADFKRVVDFLKTRVPGITIATDI
ICGFPGETDEDFQETMKLVEEYRFPSLFINQFYPRPGTPAAKMPQVPAQIKKQRTKELSK
LFHSYNPYDHKIGKRQKVLVTEESFDSKFYVAHNKFYEQILVPKNPEFMGKMVEVDIFEA
GKHFMRGQPISEARVFTPSIRRPFARGEVSGLTEEFRHALENDSESKARPSVERQIVQLS
HRMVMQLPWQHEGKMLKMLSLSVALLAVLIAFYYGDI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgattgcggctgatgatctttgccttgaagacattgaagatattgtgtcggcacaagat
ccaaagccctttgatcgtcagttcagtagaaaaaacattattcctaaagtgcgaaaacgc
cagttgcaaaagaatgtggaagtggatgatcctccccctagagatagtgtgattcctggt
atacagaaaatctggatacgtacatggggatgttcccataatagttcagatggcgaatac
atggctggacagctagctgcttatggatacagtataacagaaaatgcagcagaagcagat
ctctggctattgaacagttgtacagtaaaaagccctgctgaagaccattttcggaactca
attaagaaagcacaagaaggaaaaaagaaagttgtcctagcgggatgtgttccacaagcc
cagccccgacaagactatcttcaaggcctgagcattattggggttcaacagatagatcgt
gtagtggaagttgttgaggaaactattaagggtcattctgtgagattgctgggacagaaa
aagggtaatgggaaacggctaggaggagcgcgactggatttgccaaagattagaaagaac
cccctgatagaaatcatttccatcaatacagggtgtctgaatgcatgtacttattgcaaa
actaagcatgcccgtggagaattagcaagttatcctattgaagaactggtaaacagaggc
aaacagtcctttcaagaaggagtatgcgagatatggctgaccagtgaagataccggggct
tatggcagagacattggcacagacctcccgactctcctgtggaagctagtggaagtgatc
cctgagggagcaatgctaaggctcggcatgacaaaccctccgtatattttagagcatctg
gaggaaatggcaaaaattctcaaccacccaagagtctacgcttttcttcatgtaccagtt
caatccgcctctgatagcgtattgatggacatgaagagagaatattgtgtggctgatttc
aaacgcgtggtggattttcttaaaactagagtacctggaataacaattgctacagacatc
atttgtgggtttccaggggaaaccgatgaagattttcaagaaaccatgaaacttgttgaa
gaatacaggtttccaagtctttttattaaccagttttatccacgccctgggactccagct
gcaaaaatgcctcaggttccagctcaaataaagaaacaaagaacaaaagaactgtccaaa
ttatttcattcatacaatccatatgatcacaagattgggaagagacagaaagtgcttgtt
acagaagaatcctttgattccaaattttatgttgctcataataaattctacgaacagatt
cttgtaccaaagaaccctgaattcatgggaaagatggtagaagtggacatttttgaagca
gggaagcattttatgagaggacagccaatatcagaggccagagtattcactccatccatc
agaaggccgtttgcccgaggagaagtttctggtttaacagaggagttcagacatgcactg
gagaatgactcagaatcaaaagcccgtccatctgttgagcggcaaatcgtacaattgagc
cacaggatggtgatgcagttgccttggcaacacgagggaaaaatgctgaagatgctgtca
ctaagtgtggctcttctagcagttcttattgccttttactatggagacatttaa
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