| Entry |
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|---|
| Symbol |
VPS13A
|
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| Name |
(RefSeq) vacuolar protein sorting-associated protein 13A
|
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| KO |
| K19525 | vacuolar protein sorting-associated protein 13A/C |
|
|---|
| Organism |
nss Notechis scutatus (mainland tiger snake)
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| Brite |
KEGG Orthology (KO) [BR:nss00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:nss04131]
113414322 (VPS13A)
Membrane trafficking [BR:nss04131]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113414322 (VPS13A)
|
|---|
| SSDB |
|
|---|
| Motif |
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| Other DBs |
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| LinkDB |
|
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| Position |
Unknown
|
|---|
| AA seq |
3114 aa
MVFESLVVDVLNRFLGDYVVNLDSSQLQLGIWGGDFFGWMWESNIHSLDLDKAQEKQDTF
IEKLITQVIRNLQLKISNIHIRYEDDITNKDIPLSFGISLENFSLQTSDQNWNPCIQDAT
SKLFYKLVRLDNFFAYWNVKSEMYYHGDYKESLSHLKYGIASTNVIPEGYTFVFRPISAK
AKLRMNPRSDVDFSAPKLDLDINLQDITIELNKPQYFSIMELLESIDMMTRNLPYRKYRP
DVPVHNNARIWWRYVTQGILEVNIQPKLQMWSWEHIRYHRNQVKSYKELYKIKITSKKVT
QETLFMLEDLEKTLDIFNITLARQQAEFEAIKAGLKIFKPGAKQDDEDSGGWFSWMWGWS
GGKSSETKQEPKGIEQFMTPQEKDKLYAAIGYSETAVDPTLPKTYEAMKLYVKLISMSVL
IRENTEKPELIKLALIDLCTTVAQRPGAEAIRFESSVSAFEVQGMAQKKTVPCLLSSHTV
HSQRNASLFTIMFETNPLDENCNQRLIIESQPLEIIYDAMTVNSLVDFFRPPSDVHLEQI
TSATLTKLEQFRDKTATGLVYVIETQKVLDLKINLMSSYVIVPQNGFYEATSNKLLLDLG
HLKMSSKCRSTLSDIKVGESALEDIMSRAYDRFDIQLSSIQLLYSRHYENWEEARRLQSS
SQHILQPLDVKMELNRAMVVTDARMPKYKMYGELPLLSFNISDEKLKSILELIDSIPKPK
NSSDSTAVLQPSKLQASSLITTPQMSTLVIPFLEPLSIAGSSESEDEFYDAPSSPLEDLP
FFEAPLGSLSRASSFRKNTAKTEPLKNMTDFQLRFEISEVFVQVCRLAEDIEKPILRLEI
LKLGTELKLRTYDMTATAFLREICLMCPEYIDNKEKPVYIISTLDNSVEDLLSIEYIKAD
INAPDLKSTYQNVLQLIKVTFSSIDIHLHTEALLSTMNFLNNLLPTQEANTVEIVQEKEE
KKEVLRKFSSKKSKHEDVCDLHLLVDMNCLRIFIREQKRWISEISIEGLDSQVVMKKETT
EISAKLRNIIIVDCDVTALYKKALYITGKEVFSLKMITYTCATDGASFTNMNAVDSNIYL
TVGCIQIVFVNKFVSAILAFVNNFQMAKEAITEATVQAAEKAATGVKELSKQSSRMALDI
NIKAPVVIIPQSAVSTDVLVADLGMITIKNEFMLVKTKLRYSVPPVLDSICVKLSELKLY
RSNIMNGLLQNELQLLQPLNLEVKVERNLAALWYHEIPDINIFGRLKPINLILSEGDITT
MLRTLNENLGDSFEPPSAQEKKDVLSIHSGAASVSQHSGAGTTVVTSAVVEMHSSVKVKT
ALKLDFQFDSLTLVLYSPQSKQPQVKDERDNSLKLAEFKLLLIAAAVKMLSDGSLNASVK
LTDCTLDDKRETVQKATPRMVEMKHGSEKKVMVNISYKQGRDDTTVVDTIVEETYLCASV
EFLLAVAEIFLNANAESTAANKNFRQTLTTKEQVPVQSASTMEINLTVKNPDIVFVADLT
RKDASALVATAQCEISIKNAPGMYKMTAVVEDINVKACPFFPALRKGNITTVLQPCDLFF
NMMQSGEEPQKAELSIKSLTIKVSPIIINTVITITSALFPTKEAAEKDLSPVPPDLWDKK
NITNLNMWFLEESIENKHPASVAELIPTGESLTMKIETVVLTLEAGVGHKTVPMLSAKSS
FSGEVKNWSSLINLSSRLELEVHYFNEMFGVWEPLLEPLEVENSDEFSPWVLELKMKKKN
KKAFVESVAEEEHYKVPEYKTVITIYSQNQLNITLSKCGLLMLSNLGTAFAEAATEASET
FKKDRAPFVLINSLGVSTNVLPSESFSVLNHEPKANSFHLEDGQSLNMEYIRTKSEQDQF
TAMTTLSSKVFFIWLTPQNHSTTDKIPLTKVGRSLYRVRHNDSGVVRSIVCQIDTVDGSK
IVTVHSPIQIKNHFSIPLSIFEDGKCLGVALPDNEFNIPLTSYRSLLFFRPVIDADETSE
EYESSEGVSFDEMVKNFDKLLQKKCRSLKSPNNPLIINIVPMQDTLITSTCTDDQWDLPY
VVHLWSSVILRNLLPYQIAYSLEGYSTTCSALEAGCSAQIHNALLDQSKLELRLLNYLDK
DWTTEYCIQSNQQEISFITFSCISDLDRTDLDIAIHVTYATGQVIVAIHSPYWMVNKTGR
MLQYKADGIHRKHPPDYKLPLLFSFQPKHFYHDNKVQLMVTDSELSDHFSLDTVGSHGFV
KCKSHKKEYQVGVTIHNSSFNITRIVTFTPFLMITNRSTHILEVAEHGNENWIPVFFQQC
VPFWPENNDSKLQVRVKDSYIPSKVIQLDKQENCLLLHLDNKLGGIVVDITLAEHSTTIT
FSNYHDGAAPFLIINHTKEEVIEYGQSSLTSMEETLEPNKAVLYTWADPVGSRKLKWKCG
KNSEEITQKDDLMTPFQVGAKHIFIVSFFEGLQRIILFTEDEKVFKMTYESEKVELAEQE
IIVSLQDVGISLVNNYLRQEIAYIGITSSDVIWETKPKKKSRWKPLSVKQTDKLEKEFIE
YCDNSPTENKVVELDDNIPVCLTPTGNDMKILQPYEFPVRRSFLPALKVQYSTSEHQSSF
RVQIYRIQIQNHIPGAIFPFVFYPIKPPKSISLDSEPKPFTDVSIVMRTAGHSQISRIKY
FKVLIQEMDLRLDLGFLYALSDFFTLVDELPKDQEVELFKKDIESAQEELKNAVSTDTSQ
ISLYEYFHISPIKLHLSFSLSTGGEDSNRDEKHKELIPVQSLNLLLKSIGATLTDVQDVV
LKLAFFELNYNFCTTQQLQWTVIMHYSKQAIKQMYVLVLGLDVLGNPFGFIRDLSEGVEA
FFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASRITGAMAKGVAAITFDDDYQ
QKRREAMNKQPAGLKEGFTRGGKGLVSGFVSGITGIVTKPIRGAQKEGAAGFFKGVGKGL
VGAVARPTGGIIDMASSTFQGIKRATNASEDVISLRPPRFFGDDGVIRPYRLRDGAGSQM
LQNIENGRFAKLRYFTHAMVNNTDLLMVTKSGILFVTRGTFGQLTCEWQYTYDEFTKKPF
IVDGRRLRIEAKERVKSVFHAKEFGKIINFKTPEDAKWILSKLEEKVKESQPKL |
|---|
| NT seq |
9345 nt +upstreamnt +downstreamnt
atggtgttcgaatcgctggtggtggacgttctgaaccggttcctgggcgattatgtggtg
aacctggatagttcccagctgcagctgggcatttggggaggtgacttttttgggtggatg
tgggaatctaatattcattcacttgatttagataaagcacaagaaaagcaagatactttc
atagaaaagctaattactcaagttataagaaaccttcagttgaaaatttccaacatccat
atacgatacgaggatgatatcacaaataaagatattccactctcatttggtatctcactt
gaaaattttagtttacagacttcagatcaaaattggaacccatgtattcaagatgcaacc
tctaaattgttctataagttagttcgattggacaacttctttgcatactggaatgtaaag
tctgaaatgtattatcatggtgactataaagaatctttgagtcacttaaaatatggaatt
gcaagcactaatgtgattccagaaggctatacttttgtattccgtccgatttcagctaaa
gccaaactccgtatgaatccgcgatccgatgttgacttttctgcaccaaaactagatctg
gatataaatcttcaggatataaccattgaactgaataaaccacagtatttcagtattatg
gaactccttgaatcaattgatatgatgacacggaatttaccatataggaaatataggcca
gatgttcctgttcacaacaatgccaggatatggtggcgatatgttacacaaggcattctt
gaagtaaacatccaacctaagctacaaatgtggtcttgggaacatattcgataccatagg
aatcaagtgaaaagttataaagaactctataaaataaaaataacttcaaagaaggttaca
caagagactttgtttatgttggaggatctagagaagactttagatatattcaacatcact
ctagcaagacaacaggcagaatttgaggctattaaagctggattaaagattttcaaacca
ggtgctaaacaagatgatgaagactctggtggctggtttagttggatgtggggatggtct
ggaggaaaaagcagtgaaacaaaacaagaaccaaaaggtattgaacagttcatgactcca
caagaaaaagataaactctatgcagcaattggttatagtgaaactgctgtcgatccaaca
ttgccaaaaacgtatgaagctatgaagctttatgtaaaattaataagcatgtcagtgcta
atcagggaaaacacggagaaacctgagctgataaaacttgcattaattgatctgtgtacg
acagtagcacaacgacctggtgctgaagcaataagatttgaatcaagcgtaagtgcattt
gaagttcagggcatggctcagaaaaaaacagtaccctgtctgttgtcctctcacacagtc
cattcacagcgcaatgcatcactcttcacgataatgtttgaaaccaatcccttagatgag
aattgcaatcagagactaataatagagtcacagcctttggaaataatatatgatgctatg
actgtgaatagtttagttgatttcttccgacccccaagtgatgttcatttagagcaaata
acttcagcaaccctaacaaaattggaacaatttcgtgacaagacagctacaggattagtg
tatgttatagaaacccagaaggtcttagatttaaaaataaatcttatgtcttcctatgtc
attgttccacaaaatggattttacgaagctacatcaaataagctacttttggatctaggt
catttaaagatgagtagtaaatgtcggtctaccttgtcagatatcaaagttggcgaaagt
gctctagaagatattatgtcaagagcttatgataggtttgacattcaactcagtagcata
cagctactttatagcagacattatgaaaactgggaggaggctcgtaggttacaatcctca
tctcaacatatcttgcaaccgctagatgtgaaaatggaactgaacagagcaatggttgta
acagatgcaagaatgcccaagtacaaaatgtatggtgagctgccattactttcttttaat
atctcagatgagaaattaaaatctattctggagcttattgacagcattccaaaaccaaaa
aattcatctgactccacagctgttctacaaccttccaagcttcaagcatcttctctgata
acaacacctcaaatgtcgaccttagtcattccatttttagaacctctttcaatagctgga
tcaagtgaatctgaggatgaattttatgatgctccaagtagtcctttggaagacctacca
ttttttgaagcacctttgggctcactgagtagagctagtagcttccgaaaaaacacagca
aaaacagaacctttgaaaaacatgactgatttccaattaagatttgaaatatctgaggtg
ttcgttcaagtgtgtcgtcttgcagaagacattgaaaagccaattcttcggctggaaatt
ttaaaattaggcactgaacttaagctcagaacatatgacatgactgctactgcttttctt
agagaaatttgcttaatgtgtccagaatatatagataataaagagaagcctgtttatatt
atttcaactttggataattcagtggaagatcttctatcaattgaatatatcaaggcagat
attaatgctccagacctgaagagtacttaccagaacgttctgcagctgataaaggtgact
ttttcttctatagatattcatttacataccgaagcacttctgagtacaatgaattttcta
aataatctccttccaactcaagaggctaatacagtagaaattgtccaggaaaaagaagaa
aaaaaagaagttcttaggaaatttagttcgaaaaaatcaaaacatgaggatgtttgtgat
ctccatcttttggtagacatgaattgtttgcgtatttttataagagaacagaaacgttgg
atctcagaaattagcatagaaggtcttgatagccaagtggtaatgaagaaagaaacaact
gaaatatctgctaaattaaggaatataattattgtggattgtgatgtgacagcactatat
aaaaaggctctgtatataactggaaaagaagtctttagtttaaaaatgattacatacaca
tgtgccacggatggtgcttcctttacaaatatgaatgctgttgacagcaacatttattta
actgttggatgtattcaaattgtttttgtcaacaaatttgtttctgcaattttggctttt
gtaaacaattttcagatggcaaaggaagcaattactgaagccactgttcaagctgctgaa
aaagcagccacaggtgtaaaggaattatctaagcagagttcccgaatggcactggacatt
aacattaaagcacctgttgtcataataccacagtcagcagtatctactgatgttttagtt
gctgatttgggtatgatcacaataaaaaatgagtttatgcttgtgaaaacaaagcttcgt
tacagtgtcccaccagttcttgacagtatttgtgtgaagctgagtgaactaaaattatac
agatcaaatattatgaatggattattacaaaatgaattacaactactacagccattaaat
cttgaagttaaagttgaacgcaatttagctgctctttggtatcatgaaattcctgacatt
aatatatttgggcgtctcaagccaattaatctgattctcagtgaaggggatataactaca
atgttgaggactttgaatgaaaatttaggagatagttttgagcctccatctgcacaagaa
aaaaaagatgtgttaagcattcatagtggagctgcaagtgtctcccagcattctggagct
ggaacaacagtggtgacatcagctgtggtagaaatgcactcctcagttaaagtaaaaaca
gcattaaaactagacttccagtttgattccctgactctagttttgtacagcccacagtcc
aagcagcctcaagttaaggatgaacgagataatagtctgaaacttgcagaatttaaatta
ttgttaatagctgctgctgtcaagatgttatcagatgggtcactgaatgcttcagttaag
ttaacagattgcaccttagatgataaacgagaaactgtacagaaggctacaccaagaatg
gtagaaatgaaacatggatctgaaaagaaagtcatggtgaatataagctataaacagggg
agagatgacaccactgttgtggacacaattgttgaggaaacctatctctgtgctagtgta
gagtttctgcttgctgttgcagaaatatttctaaatgctaatgctgaaagcactgctgca
aataaaaacttcaggcaaactctgactacaaaggaacaagttcctgtgcagtcagcatcc
acaatggaaataaatcttactgttaaaaaccccgatatagtgtttgtggctgatttaact
cgaaaagatgcttctgcattggtagccacagcacagtgcgaaatctccataaagaatgca
cctggaatgtataaaatgacagctgttgtagaagatataaatgtgaaagcttgtccattt
tttccagctctgaggaaaggaaatattaccacggtattacaaccatgtgatcttttcttt
aatatgatgcagtcaggtgaagaaccacagaaagctgagctgtcaataaaatccctaacg
attaaggtgtcacctattatcataaatacagttataactatcacatcagcacttttccct
accaaagaggctgcagagaaagatcttagccccgtaccgccagatctttgggataagaag
aatattacaaatctaaatatgtggtttcttgaagaatccattgaaaacaaacatcctgct
tctgtagctgagttgattcctacaggagagtcattaacaatgaaaattgaaactgttgtt
ttaactcttgaagctggagttggtcacaaaacagtaccaatgctttcagcaaaatcctca
ttttctggagaagttaaaaattggagtagtttaatcaatctctcatcacgtcttgaacta
gaggtacactatttcaatgaaatgtttggtgtttgggaaccattacttgagcctctagaa
gtagaaaacagtgatgaattcagtccatgggttctagaattaaagatgaaaaagaaaaac
aaaaaagcctttgttgaatcagtggcagaagaagaacactataaagtgcctgaatataaa
acagtaatcactatttattctcaaaatcagctgaacattactttatctaaatgtggacta
ttaatgttgagtaatctaggcacggcatttgcagaagcagctaccgaggcttcagaaaca
ttcaaaaaagatagggccccttttgtattaataaattccttaggagtctctaccaatgtt
ttgcctagtgaatccttcagcgttcttaatcatgaaccaaaagcaaattcatttcatctt
gaagatgggcaaagtctaaatatggaatatatcagaaccaaaagtgagcaagaccagttc
acagcaatgaccactctaagcagcaaggtattcttcatttggctcactcctcagaatcat
tctactactgacaagattccattgacaaaagtgggtcggagcttgtacagagttagacat
aatgattcaggtgttgtaagatctattgtttgtcaaattgatactgttgatgggagcaag
atagtaaccgtacattctccaattcagataaagaatcatttttcaattcctttgagtata
tttgaagatggaaaatgtttgggagtagcactaccagataatgaatttaacataccatta
acttcctataggtcattactgttttttcgaccagtaattgatgcagatgaaacttctgaa
gaatatgaatccagtgaaggtgttagctttgatgaaatggtgaagaattttgacaaattg
ctacagaagaaatgccggtctttaaaatcccctaataacccacttattatcaacattgtt
ccaatgcaagatactttgataacttcaacttgtacagatgatcagtgggatttaccatat
gttgttcatttgtggtcttctgttattctccgcaatctacttccatatcagattgcctat
tctttagagggatatagtaccacgtgcagtgctctagaagctggatgttctgctcagatt
cataatgcattactggatcagagcaagctagaattgcgtttacttaattatcttgataaa
gattggactactgagtactgcatccagtcaaatcaacaagaaattagtttcatcacattt
tcatgcattagtgatctggataggacagatttggatatagctatccatgtgacatatgct
acaggacaagtgattgtagcaattcacagtccctattggatggtcaacaagacgggtcga
atgttacagtataaagccgatggaattcaccgcaaacatccacctgactacaagttgcca
cttctcttttctttccagcctaaacacttttatcatgataataaggttcagctcatggtg
acagacagtgaactttctgatcatttttccctggatacagttgggagtcatggctttgta
aaatgtaaaagccacaaaaaagaataccaggttggtgttactatacataatagcagcttt
aatatcactagaatagtgactttcacaccttttttaatgatcacaaacagaagtacacac
attttagaagtagctgaacatggcaatgaaaattggataccagtattttttcaacagtgt
gttccattttggcctgaaaataatgacagcaagttacaggttagagtaaaagattcttac
attccatccaaagttatacaacttgataaacaagaaaactgcttactacttcatttagat
aacaagcttggtggcattgttgtggatattacgctagctgaacattcaacaacaattaca
ttctctaattaccatgatggtgcagccccattcctgataattaatcataccaaagaagaa
gtaattgaatatggacaaagttctctcacttcaatggaagaaactttagaaccaaataaa
gcagtattgtatacatgggcagatcctgtaggttccagaaaactgaaatggaaatgtgga
aagaacagtgaagaaataactcagaaagatgacctgatgacaccatttcaagtgggagcc
aagcacatttttatagtttcattttttgaaggtttgcagcgtataatcttattcactgaa
gatgaaaaagttttcaaaatgacatatgaaagtgaaaaagtggaattagcagaacaagag
ataattgtatcattgcaagatgttggaatttctttagtaaataactatttaagacaggaa
atagcatacattggaatcacaagctccgatgtaatttgggagaccaaacccaagaaaaag
tcaagatggaagccacttagtgtgaaacaaacggacaaactggagaaagagtttattgaa
tactgtgataactcacctacagaaaataaagtagtggaacttgatgataatattccggtc
tgtttgactcctactggtaatgacatgaaaatattgcagccatatgaatttcctgtgaga
agaagctttttgccagctttaaaagtacaatacagtacctctgaacatcagtcttctttc
agagttcaaatctatagaatacagatacaaaatcatattcctggagccatatttcctttt
gtgttctatcccattaaacctcccaagtccatctcattggattcagaacccaagccattt
actgatgtcagtattgtgatgagaactgcaggacattctcagatatcacgcataaagtat
tttaaagttttaattcaagagatggatctccgattagatcttggtttcctttatgcgctg
tccgatttctttacacttgttgatgaacttcccaaagaccaagaggttgaactttttaaa
aaggatatcgaatctgcacaggaagaattaaagaatgcagtatcaactgacacatcacaa
atcagtttatatgaatattttcatatctctccaattaagttgcatttaagcttttcactc
agtactggtggagaagacagcaacagagatgaaaaacacaaagaactgattccggttcaa
tccttaaacctcttgttaaagagcattggggccacacttacagatgtgcaggatgttgtt
cttaagttggctttctttgaactgaactataacttctgtactacccaacaattgcagtgg
acagttatcatgcattattcaaagcaggcaattaaacaaatgtatgttcttgttcttggt
ctggatgttttgggcaatccatttggattcataagagatttatctgaaggagttgaagca
tttttttatgagccgtatcagggggctatccagggtccagaagaatttgtagaaggaatg
gcactaggattgaaagccttagttggtggcgctgttggtggactagctggtgctgcttca
agaataactggtgctatggctaaaggagtagcagcaataacttttgatgacgattatcag
cagaaacgacgagaagcaatgaataagcaacctgctggcctgaaggagggctttactcgt
ggaggaaaaggcttagtatctggttttgtcagtggtataacaggaatagtaactaagcca
ataagaggagcccaaaaggaaggagcagcaggtttcttcaaaggagttgggaaaggatta
gtaggagcagtagcaagacctactggaggaataatagatatggctagcagcacttttcaa
ggaattaaaagagctacaaatgcttctgaagatgtcataagcctgcgtcctccacgcttc
tttggggacgatggagtcattagaccttacagattaagagatggtgctggaagtcaaatg
ttacagaatattgaaaatggaagatttgcaaaactacgatactttacacatgcaatggtt
aataatacagatttattaatggttacaaaaagtggcatattgtttgtgacaagaggtacg
tttggacagttaacatgtgaatggcagtacacttacgatgaatttaccaagaaaccattc
attgttgatggaagaaggttgcgcattgaagcaaaggaacgagtgaagtctgtatttcat
gccaaagaatttggaaaaataattaattttaaaacaccagaagatgcaaagtggatcctt
tctaagctggaagaaaaagtaaaggagagtcaaccaaaactatga |
|---|
