Notechis scutatus (mainland tiger snake): 113414621
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Entry
113414621 CDS
T09026
Symbol
TRIM54
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113414621 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nss04121
]
113414621 (TRIM54)
Ubiquitin system [BR:
nss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113414621 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
Sina_RING
RHH_9
Prok-RING_4
UvrD_C
zf-Nse
zf-RING_10
ApoC-I
DUF1664
Motif
Other DBs
NCBI-GeneID:
113414621
NCBI-ProteinID:
XP_026527393
UniProt:
A0A6J1UFY4
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MNFAVGFKPMLGTSQSMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSTSVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRXVKCRI
PXFLCQVWGPLTQVVXAQPLSFTFLFLQGELSDGIAMLVAGNDRIQAIITQMEEICKTIE
DNARRQKQHLCLRFDSLYSILEERKKELLQEIGREQEEKVQRVRGLIRQYGDHLEVSSKL
VESAIQSMEEPQMALYLQQSKELIKKITDMSKASMDSRPESGYENMDHFSINVDHVAEML
RTIEFQTDISGEETESEGIIPEGSVEAGEEDHPEGSEGPEGAEDGENLSRFRPKPPNIPS
RGQH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgccgtgggcttcaagccgatgctggggacttcacagagcatggataacctg
gagaagcagcttatctgccccatctgtttggagatgttcaccaagccagtggtcatcctg
ccctgccaacacaacctctgtcgtaagtgtgccaacgacatctttcaggcctccaacccc
ctgtggcaatcccgtggatctacatcagtgtcttcaggaggccgattccggtgcccatcc
tgtcggcatgaagtggtgctggaccggcatggagtttatggcctgcaacgcaatcttttg
gtggaaaacataattgatatctacaagcaagaatcctctcggtaagttaaatgtagaatc
ccataatttctttgccaagtttggggacccctgactcaagtggtgtgagcccagccatta
agtttcaccttcctatttcttcagggggagctgagtgatggcattgccatgctagtggca
gggaatgaccgtatccaagccatcatcacccagatggaagagatctgtaaaactattgag
gataatgctcggcgacagaagcagcatctttgtctgcgctttgactctttgtacagcatc
ctggaggaacgcaagaaagagctgttgcaagaaatcggacgagagcaagaggaaaaagtc
caaagggtgcgggggctcatccggcaatatggagaccaccttgaggtctcctctaagctg
gttgagtcagccatccaatccatggaggaaccccagatggccctctatctgcagcagtca
aaggagctgatcaaaaagatcacagacatgtccaaggcatccatggatagccggcctgaa
tctggctatgaaaacatggaccatttctctatcaatgtagatcacgttgctgaaatgctg
agaactattgaatttcagacagatatttctggagaagaaactgagtctgaaggaattatc
ccagaaggaagtgttgaagctggagaggaagaccatccagaaggatcagaggggcctgaa
ggagcagaagatggagagaacctgtctcgattcagaccaaagccacctaatataccatct
cggggacaacactga
DBGET
integrated database retrieval system
