Notechis scutatus (mainland tiger snake): 113414750
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Entry
113414750 CDS
T09026
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113414750 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nss03041
]
113414750 (PRPF38B)
Spliceosome [BR:
nss03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113414750 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
113414750 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
113414750
NCBI-ProteinID:
XP_026527543
UniProt:
A0A6J1UGC5
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MANNCPFVGPGNCHPLPPHQSPQQQQQHQGILQQQQNPQAGAVLSPPLALQSAGPKPAAS
GKQGNALPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIFFKVTHVEPWE
KGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHIDSPYIRAL
GFMYIRYTQPPKDLWDWFESFLDDEEDLDVKAGGGCMMTIGEMLRSFLTKLEWFSTLFPR
IPVPVQKNIDQQIKARPRKIKKDGKEGVEEADRHTERRRSRSPRRSLSPRRSPRRSRSRS
HHREGRGSSSFDRELERERERQRLEREAKERERERRRSRSSDRALDRRRSRERHRSRSRD
RKGDRREREKENEKNKRKERDHDKERGVERERDRSRERDHSREKSKDRKGKSEGDERRHK
DEKDERKHKDEKRDAKKERRHSRSRSRDRKHRSRSTSRNASKHSRSRSKDKSSKHKSGSK
EKSNKQSRSRSRGRTDSSEKTRKRDRSPSKERSRKRSKSKERSHRYDHSDKDHSDKHDHQ
RSQSTEQENQEKQSKNKDETV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggccaataactgccctttcgtggggcccggcaactgccatccgctgccgcctcaccag
tcgccgcaacagcagcagcagcaccaggggatcctgcaacagcagcagaatccgcaggcc
ggcgccgttttgtcgcccccgttagcgctccagagcgcgggccccaaaccggccgcctcg
ggcaagcaaggcaacgctctgcctctgtgggggaacgaaaagaccatgaacctaaacccc
atgatcctcaccaacatcctctcctccccttacttcaaggtacagctttacgagctgaag
acctaccacgaggtggtcgacgagatctttttcaaggttacccatgttgagccttgggag
aagggaagcagaaaaactgcaggtcaaacagggatgtgcggaggggtgcgaggagttgga
actggaggtatagtgtctaccgccttttgcctcttgtacaagttatttactttgaagctt
acccgtaagcaagtgatgggactaataactcatatagattccccatacattagggccctt
ggattcatgtatattaggtacacacaacctccaaaagatttatgggactggtttgaatcc
tttctcgatgatgaggaggaccttgatgtgaaagcaggtggtggctgcatgatgaccatt
ggagaaatgctgcgttcttttcttactaagcttgagtggttttctacattatttccgaga
attcctgtaccagtgcaaaagaacattgatcaacaaattaaagccagacctagaaaaatc
aagaaggatggcaaagagggagtagaagaagcagacaggcatacagagcgtagacgttca
aggtctccaagaagatccttgagtcctagaaggtcacctagaagatcaagaagcagaagt
catcatcgagaaggacggggttcatccagttttgatagagaattggaaagggaaagggag
cgacaaagattagagcgtgaagctaaggagagagagagggaacggaggcggtctcgaagt
tctgatcgcgcattggaccgtaggcgaagccgggaaaggcacagaagtcgaagccgcgat
cgaaaaggagacaggagagagagagagaaagaaaatgaaaaaaataaaaggaaggagcgt
gaccatgacaaagagagaggtgttgaaagagaacgagatcgctctagagagagagatcat
tcacgagaaaaatcaaaagacagaaaaggtaaaagtgaaggagatgaaaggaggcacaaa
gatgaaaaagatgaaaggaagcataaagatgaaaaaagagatgccaaaaaagagaggcgg
catagccgaagccgaagtagggatcgtaagcataggagcagaagtacaagtagaaatgct
agcaagcatagtagaagcaggagtaaagacaagtcaagtaaacataaaagtggaagtaaa
gagaaatcaaacaagcagagcagaagccgaagcagaggaagaactgatagcagtgaaaag
actcgaaaacgagaccgtagtcctagtaaagaaagatcacgaaaacgtagcaaaagcaaa
gaacgttcccacagatatgaccacagcgataaggaccactcagataaacacgatcatcaa
aggagccaaagtacagaacaagagaatcaagaaaaacaatctaaaaacaaagatgagact
gtataa
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