Notechis scutatus (mainland tiger snake): 113414809
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Entry
113414809 CDS
T09026
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04510
Focal adhesion
nss04512
ECM-receptor interaction
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113414809 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113414809 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113414809 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
EGF_laminin
Laminin_G_2
Laminin_B
Laminin_N
EGF_LMN_ATRN
Laminin_I
Laminin_II
Laminin_G_3
JAG1-like_EGF2
RBDV_coat
Motif
Other DBs
NCBI-GeneID:
113414809
NCBI-ProteinID:
XP_026527653
Ensembl:
ENSNSUG00000008176
UniProt:
A0A6J1UGN9
LinkDB
All DBs
Position
Unknown
AA seq
3002 aa
AA seq
DB search
MIDDIFDTDEESLFPAILNLASNAHISTNATCGEKGPEMFCKLVEHVPGRPLRNAQCRIC
DYNSANSKEQHPISNAIDGTNHWWQSPSIQNGREYHWVTITLDLRQIFQVAYIIIKAANA
PRPGNWILERSVNGIEFSPWQYYAISDTECLTRYNVTPRLGPPTYKKDNEVICTSYYSKL
VPLEHGEIHTSLINGRPSADDPSPALLEFTSARYIRLRLQRIRTLNADLMTLSHHDPKDV
DPIVTRRYYYSIKDISIGGMCICYGHARSCPLDKHTEKLQCQCEHNTCGESCNECCPGYH
QAPWRPGTISAGNKCERCNCHNKTEDCYYDQRVADEKKSINIFGQFKGGGVCINCTQHTT
GINCDVCSNGYYRPQKVSPYDNNPCRPCECDLFGSFGFDCVKDNNHADPQKDIQPGQCHC
KEGYAGKKCDHCAFGYKGYPNCIRCNCSLVGSINDDPCSEPCLCKENVEGENCDRCKSGF
YNLQERNPQGCTECFCFGVSDVCESLPWSTTKVSSMIGWEVTTLYSSKTIQPQENHFDKS
HQISINDTEVAKVLNPPYYWSAPKSYLGNKLTAFGGSLKYTVSYDIPMDSTDSDLVSSVD
VIIQGNGYILSTRSEGLSLQPYEEYSSTVHLISENFVDFNTKKSIDRDTLMTVLVNVTRI
LLRASYNTAEKSVYRLDSVTLDTANANLIDLSSAVHVEYCECPQGYSGISCESCVPGYYR
VDAILFGGICLPCECNGHATECDSHGVCIACEHNTTGESCEQCLPGFYGMPSRGTTEDCQ
PCACPLRSATNNFSPTCHLDNRDEVVCDKCAPGYAGVRCERCANGYYGNPLVPGKPCIPC
DCNGNVNPLEDGHCHSVTGECLKCIGNTVGHHCERCADGYYGDAVTNKHCYVCECDINGS
VSSVCHHETGLCQCKANVVGKRCDKCLFGYYGLSTTASCLPCLCSKIGSATEDCNEEGQC
RCALGVAGDKCGHCAPGFYAFQDGGCKPCDCAHTHNTCDKDSGQCICAPHTTGEKCELCE
ENFWGHDIEKGCKACNCSQLGSLSLQCDQLTSQCQCKQGYGGDRCALCALGYRDYPDCIP
CDCDVRGSKAEMCNQGMCSCEEETGVCVCKDNVFGLHCNECKSGTFALHAINPLGCIPCF
CSGMTEFCAEVEGYVRIPITLTLEQELLHVVSLSNFTGTSEGVFSQFPDIVMDAATVRQH
LNAEPFYWKLPDQFQGNQLMSYGGKLKYSVAFFALDDLGTANLEPQVLIKGGRPRKQVIY
VDVPAPENGLRQDEEILMMENTWKYFNAVSDESVSHSDFMSVLSHIEYILIKASYGQGLQ
QSRISNVSMDIAVKADYMPLAKEPAHHIEKCLCPGGYAGLSCQDCAPGYYRERHGNAHLK
MLPSVVSLCVPCQCNNHSSACDSETGKCLDCRENTVGDHCNICAPGYYGKVKGSINDCSL
CACPRTNPERCSPGYYGHPRVPGGKCQQCQCNQNGSLHHHCDHISGQCVCKQGVTGQLCD
QCDSRHILVENECVSCDDDCTGQLLNDLDNFDKAVHLVNFTGAILAPYGALSDLENATKH
LKDALGVEESPISLMKIMNGNLDTISNVSDQFYNELTRILEREENLNNATESTLNKSKEL
AKFINTLQASMKVLVEMAATLNTTGDSDFPQSNKTLQKLQDDIPMMLDIMRRRYSQKLHQ
DSIHELKSAEKLLTRIQREYWRPQQKIKDIQKAAKRALSDHSSKHQEAQDVVNIANSNTE
EARRLLVPINNNLNEFNNKKLNVKEDEALSVMLIKEGKIQTTAATAFARDIFNSTSDLEI
HQDELMLWSSKLRQHVDDLVMQMSTRGALELVYKTEDHVAELEKNVHALDSGLLNVRNVT
VNVTNSVHVYSTIKNLVESAENLASDVTKIVYEPIHVQREPFNITGENVLHLGSTVLTDA
KHLDKKYDGLRSGLNEINIKVERLKAKASGIAKRFNDSLLQLTALPRDTNENILAIKRLA
LSANLTSLNGISHTDGFSEKLWNSSSALSKVNDTLQKTNELIIDSTNAAASAEKKVNEVE
IQAGLLYGRLKPLKILEENLSRNISEIKELINQARKQAASIKVAVSVEKDCIRAYQPQIL
STNYNTLTLNVKTMEPDNLLFYLGSNGKARFAKTGTLSVEETSSPQKPIRSATSPGTATV
LDVNLSTLMFIGGLGGQIKKSPSIKVTHFKGCIGETFLNGRPVGLWNFMEREGKCTGCFG
SPQYEDPSFHFDGSGYSVVEKSLRPTVTQIILFFNTFSTNGLLVYLASNGTKDFLTLELV
DGRIKVTVDLGSGPLTLKTENRYNNGTWYKLSFRRNKKEGILAVMDAYSLNSKEIKQGES
SGVASDLNRSDKDPIYIGGLPRSRTVRKGVHSRTFVGCMKNLEISRSTFDLLKNSYGVRK
GCILEPIRSANILHNGYIELPPKHLLVESELMATFATKNSSGIILVGLSKGEAKRRRRQV
HLPFFSIMLVNGHLAVQVLAGDRASAKRVMVKSNNGTYSDGKEHSVILTRNKRIISVQVD
ESKPEEIRLGLMAESRPINISKLFVGGIPAEESISGLMMMDSFYGCIANVIFNTEFLDFT
TAVRYEGVDMDSCFPSDKSKPVIQPEDFEIRSEIQMLPSSLKSFSQAKEKQCSENGELKY
VSNAHQFGVTRNSHLMLLFNQSTVRKKFSVQLRVRTLASSGLIYYTAHQKQVDYAALQLQ
EGKLRFSFDLGKGQSVVSHGAMISDGKWHTVETDYAKRKGIIIVDGQATEAVNVSGDGNT
LDVDGKLYLGGLPLGYLTKNVRNITRSIPACISEVTINSKQLDSLVSTFAVNKCYATIQK
GTYFDGSGFAALVREGYKVRSEINITFEFRTNVVNGVLLGISSAKIDAIGLEIVNGKILF
NVNNGAGRIKASYEPKGMTNLCDGQWHKVQAMKNKHHIALIVDGNVVQTDNPHVHSTSAD
TNNPIYVGGYPADIKQNCLTTKNSFQGCLRNFMLIKAQQADFLDFSEAFDLSGVFPHSCP
AA
NT seq
9009 nt
NT seq
+upstream
nt +downstream
nt
atgatagatgatatatttgatactgatgaggaaagtttatttcctgccattctaaaccta
gctagtaatgctcatatcagcactaatgctacatgtggtgaaaaaggccccgaaatgttt
tgtaaacttgtggaacacgttccaggtcgacccctacgcaatgcacaatgtcgaatttgt
gattacaatagtgcaaattccaaagagcaacatcctatctcaaatgctatagatggtact
aatcactggtggcaaagtcctagcattcagaatggaagagaataccattgggtaacaatt
actctagacctaagacagatctttcaagttgcttacatcatcataaaagctgctaacgct
ccaaggcccggaaactggattttggaacgttctgtgaatggtattgaattcagcccctgg
caatactatgcaattagcgataccgagtgtctaaccagatacaacgtgacaccaagactt
ggtcctcctacatataagaaagacaatgaagtgatatgcacttcctattattctaaactt
gttccacttgagcatggagagatacacacatcactgattaatgggagacctagtgctgat
gacccttcgccagcattactggaatttacctctgcaagatatatccgtctccgattgcag
cggataagaactcttaatgctgatctcatgacccttagtcaccatgatcctaaagatgtt
gatcctattgttacaagaaggtattactattcaataaaagacatctctattggaggcatg
tgcatttgctatgggcatgctcgaagttgtcctttggataaacacacagagaaactacag
tgccagtgtgaacacaatacttgtggtgaaagttgtaatgaatgttgtcctggctaccat
caggcaccatggagacctggaactatttctgctggcaacaaatgtgaaagatgcaactgt
cacaacaaaacagaagattgttattatgaccagagagtagcagatgaaaaaaaaagtata
aacatatttggtcaattcaaaggaggtggagtatgcataaattgtacacaacataccact
ggaataaactgtgatgtgtgtagtaatggctactacagaccacaaaaagtgtctccttat
gacaacaatccttgtcgtccatgtgaatgtgatttatttgggtcctttggctttgactgt
gttaaggataataatcatgctgacccccaaaaagatattcagcctggtcaatgtcattgc
aaggaagggtatgctggaaaaaaatgtgaccattgtgcttttggctacaaaggttatcca
aattgcatacgctgtaattgtagcctcgttggcagcatcaatgatgatccgtgtagtgaa
ccttgcctttgcaaagaaaacgtagaaggagaaaattgtgaccgttgcaaatctggattc
tataatcttcaagaaagaaacccacagggttgcactgaatgcttctgttttggtgtttct
gatgtgtgtgaaagtcttccatggtccactactaaggtgtcttctatgattgggtgggag
gtgacaactctatattcttcaaaaactatacaacctcaagaaaatcactttgataaatct
catcaaataagtattaacgacactgaggttgcaaaagtactaaaccctccttattactgg
tctgcacctaaatcataccttggaaataaactcactgcctttggtggctctttaaagtat
accgtgtcttacgatattcccatggacagtacagatagtgacttggtatctagtgtcgat
gttattatccagggcaatggatatattctttctacaagatctgaagggctgtctttgcaa
ccatatgaggaatattccagtacagtgcatcttatatctgaaaactttgttgattttaat
acaaagaagtcaatagatcgagacacactgatgacagttttagttaatgttacccgtatt
ctacttagggccagttacaacactgcagaaaaatctgtatataggttggactctgtgact
ttggatacagcaaatgctaatcttatagatctgtcttcagctgtacatgtagaatattgt
gaatgtccacagggttactctggaatatcttgtgaatcctgtgttcctgggtactatcga
gtggatgcaatactttttggagggatttgcctgccgtgtgaatgcaatggtcatgcaacg
gaatgtgatagtcatggtgtttgtattgcatgtgagcataataccacaggggaatcttgt
gagcagtgtttgccaggattctacggaatgccttcgaggggaaccacagaggattgccaa
ccatgtgcctgtccactgagaagtgctactaacaatttcagtcctacttgtcatttggat
aacagagatgaagttgtctgtgataaatgtgctccaggatatgcaggagtcagatgtgaa
agatgtgcaaatggatattatggcaatcctttagtgccaggaaaaccatgtattccttgt
gattgcaatggcaatgtaaacccattggaagatggccattgtcattcagttacaggggaa
tgtttgaaatgcattggaaatactgtgggacatcactgtgaaaggtgtgctgatggctat
tatggggatgcagtgaccaacaaacattgttatgtttgtgaatgtgacataaacggctcg
gtttccagcgtctgtcatcatgaaactggcctctgccaatgcaaagccaatgtagtcgga
aagagatgtgataaatgcttgtttggttattatggcctcagtactacagctagttgcctt
ccctgcctttgcagtaaaattggctcagctacagaagattgtaatgaagaaggacagtgt
cgttgtgcactaggagtggctggagacaagtgtggacattgtgctccagggttttatgca
tttcaggatggtggttgcaaaccttgtgattgtgctcatactcacaatacatgtgataaa
gattcgggacaatgcatttgtgctcctcatacaactggagaaaaatgtgaactttgtgaa
gaaaatttctggggtcatgatatagaaaagggatgcaaggcttgcaattgtagtcaatta
ggttccctcagtctccagtgtgaccagctgacttctcagtgccagtgtaagcaaggatac
ggaggggacaggtgtgccctctgtgctttgggttacagggactatcctgattgtattcct
tgtgactgtgatgtgcgtgggagtaaagccgagatgtgcaatcaaggaatgtgcagctgt
gaagaggaaactggtgtgtgtgtttgcaaggataatgtctttggattacactgcaatgaa
tgcaaaagtgggacctttgctctacatgctattaatcctttgggatgcatcccttgcttc
tgttctgggatgacagaattctgtgcagaagtagaaggttatgtgcgaattccgataaca
ctgactctagaacaggaactattacacgtggtttctctcagtaactttactggaacaagc
gaaggtgtattttcccaatttccagacatagtaatggatgcagcaacagtccgccaacac
ttgaatgcagaacccttttactggaaattaccagatcaattccagggaaatcagctcatg
tcatatggtgggaaattgaaatattcagtagctttttttgctctggatgatcttggaact
gcaaatcttgaaccacaagttctgattaagggaggtcgcccaaggaaacaggtcatctat
gtggatgttcctgctccagaaaatggattaaggcaagatgaagagatactaatgatggag
aacacctggaaatactttaatgctgtttcagatgaatctgtttcacattctgacttcatg
tcagttctgagccatattgaatatattcttatcaaggcttcatatggtcaaggattgcaa
caaagcagaatctcaaatgtctccatggatattgcagtgaaagccgattacatgcctttg
gccaaggaaccagctcaccacattgaaaaatgcctgtgccctggaggttatgcaggactc
tcctgtcaggattgtgcacccggatactatagagagaggcatggaaacgcacacctaaaa
atgttaccctcagtagtttcattatgtgtgccctgccagtgcaacaatcacagcagtgct
tgtgattcagaaacagggaagtgtttggattgcagagaaaatacagttggtgatcactgc
aatatttgtgcccctggttattacggcaaagttaaaggatccatcaatgattgttcacta
tgtgcatgtccaagaacgaaccctgaaagatgttctccaggttactatggacatcctaga
gtaccaggtggcaaatgtcagcaatgtcagtgcaaccaaaatggttctctccatcaccac
tgtgatcatatttctgggcagtgtgtttgtaagcaaggtgtaacaggacagttgtgtgat
cagtgtgattcaaggcacattcttgtggagaatgaatgtgtttcttgtgatgatgactgt
acagggcagttgttgaatgatctggataattttgacaaagccgtgcatttggtaaacttc
actggtgctatcttggcaccttatggagcactttcagacttggaaaatgccacaaaacat
ttaaaggacgctttgggagttgaagaaagtccaatctctttaatgaagatcatgaatggc
aatcttgatacaatatcaaatgtttcagatcagttctacaacgagttaacaagaatatta
gaaagagaagaaaatctcaacaatgctacagaaagtaccttgaacaagagtaaagaattg
gctaaatttatcaacacattgcaggcatctatgaaagtgcttgtggaaatggcagctact
cttaacacaacaggagatagtgatttcccacaatcaaataaaacacttcagaaattgcaa
gatgatattcccatgatgttggacataatgcgtagaaggtattcccagaaactgcatcaa
gatagtatacatgaattaaaaagtgcagaaaagttgctgacacgaatccagagagaatat
tggagaccacagcaaaaaattaaggacattcaaaaagcagcaaaacgtgccttatctgac
catagctccaaacatcaagaagcccaagatgttgtgaacatagcaaacagtaacactgaa
gaggctagacgtctgcttgttcctattaataacaacctcaatgagttcaataataaaaag
ctaaatgttaaagaagatgaggctctttctgttatgctgataaaagaaggaaaaatccaa
acaactgctgctaccgcctttgcaagggatatatttaattctacctctgatctagaaatc
catcaggatgaattgatgttatggagtagtaaattaagacaacatgtggatgacctggtt
atgcagatgtctactcgaggcgctcttgaactggtctataagacagaagaccatgttgct
gagttagaaaaaaatgttcatgcattagacagtggccttttgaatgttagaaatgtgact
gtgaatgtgacaaattctgtccatgtgtactctaccataaaaaatctagttgaaagtgca
gagaacctggcaagtgatgtcactaagattgtctatgaaccaatacatgtgcaaagagag
ccctttaacattactggggaaaatgtccttcaccttggctccacggtcttaactgatgca
aaacatcttgacaagaagtatgatggactcaggtcagggttaaatgaaattaacataaaa
gtggaaagacttaaagcgaaagccagtggaattgcaaaaaggtttaatgattccctactt
cagctgactgcattgcccagagatactaatgaaaatattttggcaataaaaaggctggct
ctttctgctaatttgacttcccttaatggtataagccatactgacggttttagtgagaag
ctgtggaattcttcatctgcattgtctaaagttaatgatacattgcagaaaacaaatgaa
cttataattgactcaacaaatgctgcagcatcagctgaaaaaaaagtgaatgaagttgaa
atccaggctggtctgttatatggaagattgaaacctctaaaaatactggaggagaattta
agcagaaacatctctgaaattaaagagctcataaaccaggctcgcaaacaggcagcttct
attaaagttgcagtatctgtagaaaaagactgtattcgggcctaccaaccccagatatta
tctactaactacaatacattaacattaaatgttaaaacaatggaacctgacaatcttttg
ttctatctgggtagcaatggtaaagccaggtttgcgaaaactggcactctgagtgtagag
gagactagttctcctcagaagcccatcagaagtgccacctcccctggaacagccactgta
ctagatgtaaatctgtcaactctaatgttcattggtggacttggaggacaaatcaagaaa
tcaccatcaattaaagtaacacattttaaagggtgcattggggagacattcctgaatggc
agaccagtggggctttggaattttatggaaagagaaggcaagtgcacaggatgctttgga
agcccacaatatgaagatccttcatttcattttgatggcagtggatattcagtggtggag
aaatcacttcgtcccactgtgacccagataattctgtttttcaacactttttcaactaac
ggactcttagtatacctggcttccaatggcacaaaggacttcttgactctggagcttgtc
gatggcagaattaaagtaactgttgatcttggttcaggcccccttacacttaaaacagaa
aaccgctacaataatggaacatggtataaactttcattcagacgaaacaaaaaagaaggg
attttggcagtcatggatgcttacagcctcaattctaaagaaatcaagcaaggagaatcc
tctggtgtagcctctgacttgaatcgttctgataaagacccaatttacattggaggatta
ccaaggtcaaggacagtaaggaaaggggttcatagcagaacatttgtgggatgcatgaag
aacttggaaatatcccgatctacttttgacttgcttaaaaattcatacggtgtgagaaaa
ggctgcatcctagagcctatacgcagcgctaatatcttacataatggctacattgagttg
ccacccaaacaccttttggtggaatctgaacttatggctacttttgctacaaagaactcc
agtggaatcattcttgtggggcttagcaaaggtgaagcaaaacgaagacgcagacaagtc
catcttccctttttctccatcatgctagtgaatggtcacttggctgtgcaggtccttgct
ggtgaccgagcaagtgcaaaaagggtcatggtcaagtctaataatggaacttacagtgat
ggaaaagaacattctgttatccttactcggaataagagaataataagtgtgcaagtggat
gaaagtaaacctgaagaaattagacttggactcatggcagaaagcagaccaattaatata
tcaaagctcttcgttggtggaattcctgccgaagaaagcatttcaggattaatgatgatg
gattctttctatggttgtatagctaatgtgatatttaataccgaatttctggatttcacc
actgcagtaaggtatgaaggtgttgatatggacagctgctttccttcagataaatctaag
cctgttattcaaccagaagactttgaaatccgatctgaaatacagatgctgccaagttct
ctaaagtctttttcacaagctaaggaaaaacagtgttcagaaaatggagagctgaagtat
gtttccaatgcccatcagtttggcgttaccagaaacagccatttaatgctacttttcaat
cagtctacagtaagaaaaaagttttctgttcaattaagagtcaggacccttgcttctagt
ggcctaatatactacacagctcatcagaagcaagttgattatgcagcccttcaactccaa
gaaggaaagcttcgtttttcatttgatcttggaaaaggacagtcggtagtttctcatgga
gcaatgatcagcgatggaaaatggcatacggtggaaacagattatgctaagaggaaaggt
ataatcatagttgatgggcaggctactgaagcggtcaatgtttcaggtgacggaaacacc
ttggatgtggatgggaaattgtacttggggggtctacccttaggttaccttacaaagaac
gttagaaatattactcgcagcattcctgcatgcattagtgaagtaaccattaatagcaag
caattagatagtctggtctcaacttttgctgtgaataagtgttatgctacaatccagaaa
ggaacttactttgatggaagtggttttgctgctcttgttagggaaggctataaagtcaga
tctgaaattaacattacttttgaattccgtacgaatgttgtgaatggagtacttcttgga
atcagtagtgctaaaatagatgccattggactggagattgtaaatggaaagattttattc
aatgtcaataatggagctggcagaataaaggcttcctatgaaccaaaaggaatgactaat
ctgtgtgatggacagtggcataaagtgcaggctatgaaaaacaagcatcatattgctcta
atagtcgatggaaatgtggttcagactgataatccacatgttcattcaacctctgcagat
acaaataaccccatttatgttggagggtatcctgctgacataaaacaaaattgcttgacc
actaagaattccttccaaggatgtttgagaaactttatgctgattaaagcccagcaagca
gatttcttggacttcagcgaagcctttgacctgagtggagtttttccacattcctgccct
gcagcctga
DBGET
integrated database retrieval system
