Notechis scutatus (mainland tiger snake): 113414884
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Entry
113414884 CDS
T09026
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113414884 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113414884 (EDC4)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113414884 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
113414884 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EDC4L
WD40_Prp19
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WDR55
Rrn6_beta-prop
Motif
Other DBs
NCBI-GeneID:
113414884
NCBI-ProteinID:
XP_026527780
Ensembl:
ENSNSUG00000009493
UniProt:
A0A6J1UBQ0
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MASASIDIEDATQHLRDILKLDRPGGSVNENQRTSSSYNGDLNGLLVPDPTAAGDGSSST
KPVPQTVPLGALQDKQVICLSGDDNSTCMVILAKDVEIVASSDSSITSKARGSNKVKIQP
VARYDWEQKYYYGNLIAVSNAYLAYAIRGASSGSAMVRVLSVSTAERTLLKGFTEGVADL
AFAHLNSNQLACLDEAGNLFVWCLSMENGKIQEEILVNIKRSDGTPHNNFRRIIWCPFIP
DENEESCEEGSQTLALLHEDRAEVCDLDIIRANHSSWPVEVTNIKEGYIVVKGHSTRLSE
GALSPDGTVLATASHDGYVKFWQIYIEGQDEPSRCLHEWKPHEGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNQELKMWCTVSWTCLQTIQFSPDIFSSVSVPPSLKVCLDLSAEYL
VLSDVERKVLYVMELVQNQEEGKAYFSSISEFLLTHPVLSFGIQMVSRCRLRHTEVLSAE
EESDGISAEGAQGSGTTGSAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMVTPVPPHGSR
EDFAFPDHLADIGMEGRGSEKGSIHGSQPDLRRISELSVPVDFLPPSNDTKPKLMTPDAF
MTPSTSLQQITGSPGSSISSLTAVTTMSSTSVGEPPLPRPSEDMSLSPKMQLDANLTLSG
SSGCLQASPRNHSVLLPGLPDKLTPKVPIPVSPGNPPPLALEQEEVEPLVVPQSSPTRER
SPDVISSASTAMSQDIPEIASETLQRSFSAAPSGLPVEILDSNHHTDSMASAASALHLLS
PRNRHSSEPSHHSLDMAPNEVDMLTAPSLLEAALPQENVALDSGVSQPWPAAPDITRETR
NSMADSPRNEVEEKHKSSCHRHTYRLLQHDSQDASAEQSDHDDEVAGLATTSGGFTTKVT
AQRLPVKDWKAKVSPRASPKLKRKGKKDDRDVPQSPRSFDQQSAPEYQEELMSLLRTQQR
EIAELRQNQMELMQRLADHLDGVQSSLMGHIERVIDSQQEQEQRRLEQALAEGQQRSGQL
QEHLSQQLSQSLSTAACNRLERTIREEMKKTVPPCKFCPEPYGLFLFFSPFLSSMQESIL
AQVQRVIKGEVSTAMKEQQAAVTSSIMQAMRSAAGTPIPATHLDFQSQQAHMLQLLQQGH
LNQAFQQALTAADLNLVLYVCETVDPQQVFGQDPCPLSQPVLLSLIQQLSSELGSQTELK
LNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQVEPHNNVSKPARRLMIMLQGLV
THNMS
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggctagcatcgatatcgaggacgcgactcagcacctgcgcgatatcctcaag
ctggatcggcccggcgggtcagtgaatgaaaaccagagaacatccagttcatataatggt
gacctgaatggtcttctggtgccagatcccaccgcagctggagacggctcgtcctccact
aagcctgttccacaaactgttcctctcggagcgctacaagacaaacaagttatctgcctc
tctggagatgataattccacctgtatggtgatccttgctaaagatgttgaaatagtggcc
agcagtgattccagcatcaccagtaaagccaggggaagcaataaggtaaaaatccagcca
gtggccagatatgactgggagcagaagtattactatggcaacctcattgctgtctcaaat
gcctatctggcttatgctattcgaggtgccagcagtggctcggccatggtgcgagtcctg
agtgtcagcacggctgagcggacgcttctgaaaggcttcactgagggtgtggcagatctg
gcctttgctcacctcaactccaaccagttggcctgcctggatgaagctggcaacctgttt
gtctggtgtctgtcaatggagaacggaaaaatccaagaagagatcttggtgaatatcaaa
cgatctgatgggactccccataacaactttcggaggataatatggtgtcccttcatccct
gatgagaatgaggagagctgcgaagaaggcagccagactctggcgttgctgcatgaagac
agagctgaagtctgtgaccttgacataatccgagccaaccatagttcatggccagtggaa
gtaaccaacatcaaagaaggctacattgtggtgaagggtcatagcacgcgcctgagtgag
ggagcactttctcctgatgggactgttttggctacagcaagccatgatggctacgtcaaa
ttctggcagatttacatagagggacaagatgaaccaagtcggtgcctccatgaatggaaa
cctcatgagggcaggcctctttcctgtttgctcttctgtgacaaccataagaaacaagac
ccagaggttcctttttggaggtttctcatcactggagcagatcagaatcaagagctgaaa
atgtggtgcaccgtctcatggacctgcctccagacaatccagttttctccagatatattt
agctctgtgagcgtccctcccagtctgaaggtctgcctggatctgtcagccgagtaccta
gttttgagtgatgtggaaagaaaggtcttatacgtgatggagcttgtccagaaccaagaa
gagggcaaagcttacttcagctccatctcagagttcctgttgactcacccagtcctgagc
ttcggcatccaaatggtcagccgctgccgactgaggcacacagaagtcctctcagcagaa
gaggagagtgatggcatcagtgctgaaggcgctcaaggttcaggtactacaggatcggcc
gcaggggtgctgatcaaactcttctgtgtccacaccaaggcccttcaggatgtacagata
aggttccagcccctccatagtccagatatggtcactccagtccctccccatggttcccgt
gaagactttgcattccctgatcacctggccgacataggcatggaagggcggggctctgag
aagggatccatccacggctcccagccggacttgcgacgcatttcggaactgtctgtgccc
gtcgacttcctccctccatcgaatgacaccaaacccaaacttatgactccagacgcgttc
atgactcccagcacttctctgcagcagatcacggggtctcccggaagtagcattagttcc
ctcactgctgtgacgaccatgagtagtacttcggttggcgagcccccccttcccaggcca
tcggaggacatgtccctaagcccaaagatgcagcttgatgccaacctcaccctgagtggc
agcagtgggtgtctccaggcaagcccgcggaatcattcggtcctgctccctggccttcct
gacaaactgaccccaaaggtccccattccggtttccccagggaaccctcctcctttggcc
ctggagcaagaggaagtggagcctctggtggtaccccagtcctcgcccactcgtgagcgc
tccccagatgtcatctcctccgcctcgactgccatgtcccaggacatccctgaaatcgcc
tcagagaccctgcagcgcagcttcagcgcagccccgtctggcctcccggtagaaattctg
gactccaaccatcacacagacagcatggcttcggcggcctccgctctccacttgctttcc
ccacgcaaccgccacagctcggagcccagccatcactccttggacatggcccccaacgag
gtggacatgctgaccgccccctcactgctggaggcggccttacctcaggaaaacgtggcg
ttggatagtggagtgagtcagccgtggccggctgctcctgacatcaccagggagaccagg
aacagcatggcggacagccccaggaatgaagtggaagagaagcataagagctcttgtcac
aggcacacctaccgcttgctgcaacatgacagccaagatgccagcgccgagcagagcgat
cacgatgatgaagttgcgggcttggctaccacatcaggcgggttcacaaccaaagtgact
gcccagcggctgccagtgaaagactggaaggccaaagtttctcctcgggcctccccaaag
ctgaagaggaaggggaagaaagacgacagggatgtgccacagtccccaaggtccttcgat
cagcagagcgctcctgaataccaggaggagctgatgtctctgctcaggacccagcaaagg
gagattgccgaactgagacaaaatcagatggagctgatgcagaggctcgcagatcacctg
gatggggtccagagctcgctcatgggtcacatcgagcgggtgatcgactcccagcaggag
caggagcagcggaggctggaacaggctctggcggaagggcagcagcgcagtgggcagctg
caagagcacctctcccagcagctctcccagtccctctctacggctgcctgcaatcggctg
gagaggaccatccgcgaggagatgaaaaagactgttcccccgtgtaagttttgcccagaa
ccttacggcctctttttgttcttttccccttttttgtccagcatgcaagagtccatcttg
gctcaggtgcagcgagtcatcaagggggaggtgagcacggccatgaaggagcagcaggct
gcggtcacctccagcatcatgcaggccatgcgctccgctgcaggcacgcccatccctgcc
actcacctagacttccagtcccagcaggctcacatgctgcaacttttgcagcagggacac
ctgaaccaagccttccaacaggctctcactgcagccgatttgaatctggtcctctatgtc
tgtgagaccgttgatcctcagcaagtgttcggacaggacccttgtcctctgtcccagcct
gtccttctgtctctcattcagcagctgtcttcagaattaggctcccagacagagctcaaa
ctcaactacctggaggaggcagtgatgcacctcgatcacagcgatcccatcacccgcgac
cacatgggctcggtgatgaaccaggtgcgccagaaactcttccagttcctgcaggtggag
cctcacaacaacgtgagcaagcccgcacgtcgcctgatgatcatgctgcaaggcctggtc
acccacaacatgtcctaa
DBGET
integrated database retrieval system
