Notechis scutatus (mainland tiger snake): 113415173
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Entry
113415173 CDS
T09026
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113415173 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nss03400
]
113415173 (LIG3)
Enzymes [BR:
nss01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
113415173 (LIG3)
DNA repair and recombination proteins [BR:
nss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
113415173 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
DUF3802
RNase_Y_N
Motif
Other DBs
NCBI-GeneID:
113415173
NCBI-ProteinID:
XP_026528244
Ensembl:
ENSNSUG00000009329
UniProt:
A0A6J1UK51
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MQALSAAFLKAARNLSRSEKLAWLPKKTPHRPTSVFRFLNKGALPLTGLWYHQSGLSSFP
LPAALHVCHLTSFSAASEMAEQRYCVDYAKRGTAGCKKCKEKILKGMVRIGKVVPNPFTE
SGGDMKEWYHVKCIFEKLERARATTKKIEDITDLEGWEELQEAEKEMINQQISDLSSKTA
NTPKKKTVIQAKISPSGQISSPKKMPLVSSNPSPRKFSGFTAKSGTSEETASSGSSHKPS
LSTEKSDPKHKDCLLREFRKLCAMVAEESSYNVKTQIIQNFLQKGTGGDGFRGDLYLTIK
LLLPGVIKSVYNLNDKQIVKLFSRMFNCSQEDMVRDLEQGDVSETVRIFFEQSKSCLPAA
KSLLTIQEVDEFLTQLSKLSKEEEQQNLLQEVASRCTANDLKCIIRLIKHDLKMNAGAKH
VLDALDPNAYEAFKASRNLHDVVERVLKNQQESQPGMKKILSVQAALMTPVQPMLAEACK
SIEYAMKKCPNGMYAEIKYDGERVQVHKKGDHFCYFSRSLKPVLPHKVAHFKDFIPKAFP
GGHSMILDAEVLLIDTKIGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNEVSLMDRPL
RERRKFLHDNMVEIPNRILFSEMKHVTKASDLADMINRVIREGLEGLVLKDLKSIYEPGK
RHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPDSQKWCTVTKCA
GGHDDATLARLQKELDMVKISKDPSKIPDWLKINKNYYPDFIVPDPKAAPVWEITGAEFS
KAEAHTADGISIRFPRCTRIRDDKDWTTSTTLPQLRELYQISKEKSDFLVVAAEEENSTA
GSSGETDGQPKLSSPQKAAKQHSKKSPVKAKKPEASKVVDKSPPKKTEGKRGEKRKAPEM
EVDKRKQMLLDVFTGVKLYLPPSVEGFRKLKRYFIAYDGDLVQEYEATSATHVMERMEDN
PAAKHVSPEWIWECIRKRRLVTPC
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctctttctgcggcttttctgaaggcagccaggaaccttagcagaagtgaaaaa
ttggcctggttgccgaagaagacacctcaccgtccgaccagtgttttcagattcctcaat
aagggcgccttgcctttgactggcctttggtaccaccaatctggcctctccagctttccc
cttccagcagctttgcatgtttgccatctgacatccttctccgctgcctccgagatggca
gaacagcggtactgtgtggactacgctaagcgaggcactgctggctgcaaaaagtgcaaa
gagaagattctcaaagggatggtgcgcattggaaaagtggtgcccaatcccttcactgaa
tccggtggggacatgaaggagtggtatcatgtcaagtgcatatttgagaaactggagagg
gctcgggccacgacaaagaagatcgaagatatcacagacctggagggctgggaggaactg
caggaggctgaaaaggagatgatcaatcaacagatctcagacctttcttccaaaactgca
aacactccaaagaaaaaaactgttatccaggcaaagatttctcctagtggacaaatatca
tcacccaagaaaatgcctctggtttcttcaaatccttcaccaaggaaattttcaggtttt
acagcaaagtcgggcacttctgaagaaacagccagctctggctcttcccacaagcccagc
ttgtccaccgagaagagtgatccaaaacacaaagactgtttgctgcgggaattcagaaag
ctgtgtgcgatggtggccgaggaatccagttacaatgtaaaaactcagataattcagaac
ttcttacagaaggggaccggtggagatggctttcggggtgatctctacctaaccatcaag
ctactcttgcctggggtcattaaaagtgtttacaacttgaacgacaagcagattgtgaag
ctcttcagtaggatgttcaactgcagccaggaagacatggtccgagaccttgagcagggt
gacgtttcggaaacggtgcggatcttctttgagcaaagcaagtcttgccttcctgcggcc
aagagccttttgacaatccaggaagtagatgagttcctgacacagctatccaaactttcc
aaagaagaggagcagcagaacctactgcaagaagttgcatcgaggtgcaccgctaatgac
ctgaagtgcatcattcgactgattaaacacgacttgaaaatgaatgctggcgcgaagcac
gtacttgatgcattggaccccaatgcttatgaggctttcaaagcatcccgtaacctccat
gatgtggtggagcgagtgctgaagaaccagcaagaatctcagccaggcatgaagaaaatt
cttagtgtccaggcagccttgatgaccccagttcagcccatgctggctgaagcttgcaaa
tcgattgagtatgccatgaaaaagtgtcccaatggcatgtatgcagaaattaagtatgat
ggagagcgtgtccaggtgcacaaaaagggagatcatttctgctatttcagccgcagtctg
aaacctgttctccctcacaaggtggctcattttaaggacttcattcccaaggcctttccg
ggaggacacagtatgatcttggatgctgaagttcttctgatcgacaccaagatagggaag
cctctgccttttgggacgctgggagtacataagaaagctgctttccaggatgccaatgtt
tgcctttttgtctttgactgcatctacttcaatgaagtcagtttgatggacaggcctctg
cgtgagcgtcgcaaatttctccacgataacatggtggaaattcccaatcgaattctcttt
tcagagatgaagcatgtcacgaaagcttcagacctcgctgacatgatcaaccgagtcatc
cgggaagggctggagggattggtgctgaaagatctcaagagtatttatgaaccaggaaaa
cgccactggctcaaagtgaagaaggactatctgaatgaaggagcaatggcagacacagca
gacctggtggttttgggtgccttctatggccaggggagcaaaggtgggatgatgtccatc
tttctcatgggttgctatgatcctgacagccagaagtggtgcacggtgaccaaatgtgct
ggtggacatgatgatgccacgcttgcccggctgcagaaagaattggacatggtgaaaatc
agcaaggatcccagtaaaattccagactggttaaagattaataagaattattacccggat
ttcattgttccagacccaaaggcagcaccagtctgggagatcacaggcgctgaattctct
aaagcagaggcccacacagctgatgggatctcaatccgcttcccccggtgtactcgtatc
cgggatgacaaagattggactacctccactaccctcccacaactcagggagctgtaccaa
atatctaaagaaaaatcagacttcttggtagttgctgcagaagaagagaactccacagca
ggcagcagtggagaaactgatggccagcccaagttatcttctcctcagaaggctgcaaaa
cagcattccaagaagtcccctgtgaaagctaagaagcctgaagccagcaaagtggtagat
aaatctccaccgaagaaaactgagggaaagcgaggagaaaaaagaaaagcacctgagatg
gaggtggacaaaagaaagcagatgctactggacgtcttcactggggttaaactttatctt
cccccttccgtggagggtttcaggaaactcaagcgttatttcatagcctatgatggagac
ctggttcaagagtatgaggccacttcagcaacacacgtgatggagaggatggaagacaac
ccagctgctaagcatgtgtcccccgagtggatttgggaatgcatcagaaagagaagactg
gtgactccatgctag
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integrated database retrieval system
