Notechis scutatus (mainland tiger snake): 113415203
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Entry
113415203 CDS
T09026
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nss04515
]
113415203
Cell adhesion molecules [BR:
nss04515
]
Cadherins
Protocadherins
113415203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
113415203
NCBI-ProteinID:
XP_026528275
UniProt:
A0A6J1UD86
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MGVGTLILTKVLEEKSVLQAPSSQRSGHLALQALSELDELRSELGKTRGVAPXLSSCLAL
APAPAPAAGQLRYSVPEELDHGAFVANIAEDLGLDVSELSARRFRIASRAGSKQHLEVNL
ENGILFVNEKIDREEVCESSKACLLHLQLVIESPLELYRIEVEVLDINDNAPRFPWQEYV
LEVTESALPGARFPLESAQDPDVGTNSLRTYRLSPNGYFSLEVQTRSDGSKFAELVLERS
LDREQQRSHRVLLTALDGGIPERSGTARVVIMVLDANDNVPVFDQSTYSVSLPEDAPKGT
LAIKLNATDLDEGTNGEIEYSFSGHAPLGVRELFSVEPHTGQVRLKGQLDYERADLHELY
VQAKDRGPSAVAIHCRVLVHLLDVNDNAPEVTLTSVSTPVLEDAPPGTVIAVISVLDRDS
GDNGKVSCEIPTDTPFQLQSSFHNYYALVTTAPLDRETVPEYNVSITAQDLGSPALATKK
ILTVQVSDINDNAPRFLQPSYSVYVTENNAPGASICSVSALDPDCQQNAYLSYSIADGQI
QGMPVATYVSINSDSGHMYALRSLDYEQIRNFQIQVVAQDAGFPPLSGNATVHVFVLDQN
DNAPLVVAPMPRNGSVAVEVVPRSAEPGYLVGKVSAVDADAGQNSRLSYRIVQATDASLF
SVALYTGEIRTVRAFLAKDAPKHRLLVQVRDNGQPPLSASVALLLSVVDSVPEVLSDFRE
LPPGGETASSRLTLYLIASLGSVSFTFLVAIVILTVVKCPKERLTFPDYACSQLSCGGEG
GGSAAFCCCGGGCGSCERSAPASDRLKNSGSVNAPVSSGDCGDVGASAGPPAYCYKVCLS
PASAKSDFMFLKACSPAPPRNNEAGPQNLPPAPGPKTRGANNSRQLADQVKQANADWLPS
KQPILKSSQSLEDVGKVWKGVQKDHDRLCTLVTPMSEHKKTSGPPNSIRTPPYAPLYLQH
ISPLDYQHNVYIPGTPTSSANKDGSVFLEQEAKNSFSTFGKRKKMINYSDKHDSIVINNL
K
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgggacactaatccttaccaaagtcctggaagaaaagtcagttcttcaagct
ccttcaagccagcggagtggtcatctggctcttcaggctctctcagagcttgacgagctg
cgctccgagttggggaagactcgaggtgttgctcctnngctaagttcttgcttggctttg
gctccggctccggctccagcagctggccagctacgctactcggtacccgaagaactggac
cacggagcctttgtggccaacatcgcggaagacttaggtctggatgtatccgaattatca
gccaggcggtttcgtattgcgtcccgggcggggagtaagcagcacctggaggtgaatctg
gaaaatgggattctctttgttaacgagaaaatagatagggaagaggtgtgcgagagcagc
aaggcctgcctcctgcacctgcagctggtcatcgagagcccccttgagctttatcgcatc
gaagtggaagtgctagacatcaacgacaatgcaccccggttcccttggcaagaatatgtg
ctggaagtgacagaatcagcactacccggggcccgctttcccctggagagtgcacaggat
cccgacgtgggcacaaactccctacgtacttacagactcagccctaatggttatttctcg
ctggaggtgcagactcgcagtgacggcagcaagtttgcagagctggtgctggagaggagt
ctggaccgagagcaacagcgtagtcacagggtcttgctcacggctttggatggtggtatc
cccgagcgctcgggcacagctagagttgtgatcatggtgttggatgccaacgacaatgtg
ccagtctttgatcagtccacttacagcgtaagcctgccggaggatgcgcccaaagggact
ctggctatcaagctcaatgctactgacttggatgagggaaccaatggcgaaattgagtat
tcattcagcgggcacgctccactaggtgtgcgggagctttttagcgtggagccccatact
gggcaagtgcgcctgaaaggccaattggactatgagcgagctgatctccatgagctatat
gtgcaggccaaggaccggggcccctctgcagttgccattcactgtcgggtgttggtgcac
ctcttggatgtcaatgataacgcaccggaggtgaccctcacctcggtctccacaccagtt
ttggaggatgcacctcccggtactgtcatagctgtaatcagcgtgctagatagagattcc
ggagacaacggcaaggtgagctgcgaaatcccaaccgatacaccctttcagcttcagtcg
tctttccacaactattatgcactagtaactaccgcaccactcgaccgtgagactgtgccc
gaatataatgtcagcatcaccgcccaagatctggggtctccagcactggctaccaagaag
atcctgacagtccaggtgtctgatatcaacgacaacgcaccccgcttcctgcaaccctct
tacagcgtctatgtgactgagaacaacgctcctggggcgtcgatctgctccgtcagtgcg
ctggacccagactgccaacagaacgcttacttgtcctactccatcgcggacggccagatc
cagggcatgcccgtggccacctacgtctccatcaactcggacagcgggcacatgtatgct
ctgcgctccctggactacgagcagattcgcaacttccagatccaagtcgtggctcaggac
gccgggttccctcctcttagcgggaacgccacggtccacgtcttcgtgctggaccaaaac
gacaacgcgcccttggtcgtggctcccatgccccgcaatggttccgtggctgtggaggtg
gtgcctcgctcagcagagcccggctacttggtgggtaaagtctccgcagtggacgccgat
gcaggacagaactcgcggctttcctaccggatagtccaagctaccgatgccagcctcttc
agcgtggccctctacacgggcgaaatccgcaccgtccgcgccttcctggccaaagatgcc
ccgaagcaccgccttctcgtccaggtgcgggacaacgggcagcccccgctctcggcctcc
gtggccctcttgctctcggtggtggacagcgtgccagaggtgctctcggacttccgcgag
cttcctccgggaggcgagacggcttcttccaggcttaccctctacctgatcgcctctctg
ggctccgtctccttcactttccttgtggccatcgttatcctcacggtggtcaagtgcccc
aaggagcggctgaccttccccgactatgcctgctcccagctgtcttgtggcggggagggc
ggcggctccgctgccttctgctgctgcggcggcggttgtggctcgtgtgagcgctcggct
cctgcctcagaccgcctgaagaactccggcagcgtcaacgcgccggtctcctcgggcgac
tgcggggacgtcggagccagcgcaggccctcctgcctattgctataaagtctgcctgagc
ccagcatcggccaagagcgacttcatgttcctgaaagcttgcagccccgcccctccgagg
aacaacgaagcgggccctcagaacttgccgccggctcccggcccgaaaacccgaggggcc
aataactctcggcagctcgccgaccaggtaaaacaggccaatgcagactggctgccatca
aaacaaccaatactgaagagttcacagagcctagaggatgtaggaaaagtttggaaagga
gttcagaaagaccatgatagattgtgcactttggtcacgccaatgtctgaacataagaag
acatctggtccccctaacagcatccggacccctccatatgcacccctgtatttacaacat
atttctcctctggattatcaacacaatgtatatattccaggaaccccaacatcatctgcc
aataaggacggctctgtatttctggagcaggaagctaagaacagcttctccacatttgga
aagaggaagaaaatgatcaattattctgataaacatgacagcatagtcattaacaacctg
aaataa
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