Notechis scutatus (mainland tiger snake): 113415205
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Entry
113415205 CDS
T09026
Name
(RefSeq) protocadherin alpha-5-like
KO
K16493
protocadherin alpha
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
113415205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nss03036
]
113415205
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nss04515
]
113415205
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
113415205
Cell adhesion molecules [BR:
nss04515
]
Cadherins
Protocadherins
113415205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Cadherin_C_2
Sde0182_C
Ig_CLSTN
Motif
Other DBs
NCBI-GeneID:
113415205
NCBI-ProteinID:
XP_026528277
UniProt:
A0A6J1UB97
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MLTWPKGLLQLLLLHTAWKMGSGQLHYSVLEESQHGSFVGRIAQDLGLEVSELVPRMFRM
LSKGEKDYFEVNLQNGILFVNSRIDREELCAKNADCVLHLEVIVEKPLRFFHVEVEIKDI
NDNAPIFSTREQILSIAEFVTSGTQFLIEGASDSDIGTNALLTYTLSANNHFALDSESDE
DETNSVVLLLKVPLDREESPVHHLVLTATDSGEPKLTGTVQLLINVLDVNDNPPVFNQSV
YRVKLLENTVSGSLVINLNATDLDEGINREISYVFSNKVPLYFKNTFGINSDTGEIKLIG
KLDYEDTNFYELHIVAEDKGSPPLSKQCKVLIEILDINDNIPEISVNSVSVPLPEDSAPG
TVIAIISALDKDSGTNGQVRCFLWPTEVPFKLESTFKNYYSLILGATLDREQVAEYKMIV
TVEDQGVPPLSSSLTLLVPISDINDNAPAFPQPSYTVFVKENNPPGAHIFTMSASDPDVA
ENALITYWIDENLWPLSSYISLHSESGKLYALQSLDYEELKLLEFQVRAKDAGMPSLCGN
ATVQVFVMDENDNAPVVSGSSEEDLILLVIPMMPGHIVGKIHALDADSGYNAWLRYELVE
ESSGPWSVGQYSGEVSTKYPLDESEENKIQNVLIVVKDHGKPQLSSTATLSMSLVKNAQA
ILTEIHLTKSGESFVPLVDSINVYLIIAICSVSSLFLLATLIYVALRCHCKATESMVYGP
GRATLVCASEVGSWSYSNRHSHILAGVSAEAGAKSDLMIFSPNIPVFADNGELRNGTELI
PDSAKEVVT
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcttacctggccaaaggggctgctgcagctgcttctgctccacaccgcctggaaaatg
gggagtggccagctccattattctgtgctggaggaatcccagcacggctcctttgtgggc
cgcatcgctcaggatctggggttggaggtgagtgaactggtgcctcggatgttccggatg
ctgtccaaaggagagaaggactattttgaggtaaacctgcagaatgggatcttgtttgta
aattcccggatagacagggaggagctgtgtgccaagaatgcagactgtgtccttcatctg
gaggtgattgtggagaaacctctgaggttcttccatgtggaggttgaaatcaaagacatt
aatgacaatgctcccatcttctctaccagagaacagatcctgagcatagcagaatttgta
acatctggcacccagttcctaatagaaggtgcatctgattcagatattggtactaatgct
ctgttaacttacacgctcagtgcaaacaaccattttgctcttgattcagaaagtgatgaa
gatgagaccaactctgtagtacttctattgaaggttccacttgacagagaggagagccct
gtgcatcatttagtactgacagccactgattcgggtgaaccaaaactcacaggaactgtt
cagctcctcatcaatgtgctggatgtgaatgacaaccctcctgtctttaaccaatctgtt
tatagggtaaagttgctagaaaacacagtcagtgggtcattagttattaatctgaatgct
accgacttagatgaggggattaatcgggaaatctcttatgtttttagtaataaagtacct
ctatattttaaaaacacatttggtattaattctgatactggggaaataaagttgattgga
aaattggattatgaagacacaaatttctatgaacttcatattgttgcagaagataaaggc
agtcctccattgtccaaacaatgtaaagttcttattgagatattggacataaatgacaat
attcctgaaatatctgtcaattctgtatctgtgccattaccagaagattctgcaccaggg
actgtcatagccatcatcagtgctttagacaaggattctggcaccaatggacaggtaaga
tgttttttatggcccactgaagtaccattcaaacttgagtccacattcaagaattactac
tccctgattcttggtgcaactctagatcgagagcaggtggctgaatacaagatgattgtg
acagtggaagatcaaggtgttccaccactgtcttccagtctcaccctcttagttcctatc
agtgatataaatgacaatgctccagctttcccacagccctcctacacagtctttgtgaag
gagaacaatccccctggtgctcacatcttcacaatgtctgcctcggacccagatgtagct
gagaatgccctgatcacttactggatagatgagaatctctggccattgtcaagctacatc
tctctacattcggagagtggaaagctctatgctttgcagtccttggactatgaggagttg
aaactgctggagttccaggtgagagccaaggatgccggaatgccctccttgtgtggcaat
gcgactgttcaagtctttgtgatggacgagaatgacaatgcacctgttgtgtcaggatca
tcagaagaggacctgattcttctagtcattcccatgatgcctgggcatattgtaggcaag
attcatgccttggatgcagattctggatacaatgcatggctaagatatgaactagttgaa
gaaagtagtgggccttggtctgttggacagtatagtggtgaggtgagtaccaaatatcct
ctggatgagtcagaagaaaacaaaatccagaatgtgttgattgtggtgaaggatcatgga
aagcctcaactctcatctacagctacactgagtatgtcactggtgaaaaatgcccaggcc
atcctaacagaaattcaccttaccaagtcaggggagagctttgtgcccctggtggactca
atcaatgtctatctgattattgccatctgctctgtttccagcctcttcttgctggcaact
ctcatctacgtggctctgagatgccactgcaaggcaacggaatccatggtttatggtccc
ggcagggccaccctggtctgtgctagtgaagtgggcagctggtcctattctaatcgccac
agccacatcctggcaggtgtgagcgcagaggctggtgccaagagtgaccttatgattttc
agtcccaacattcctgtctttgcagataatggggaacttaggaatgggacagaattgatc
ccagattcagctaaagaggttgtcacttaa
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