Notechis scutatus (mainland tiger snake): 113415356
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Entry
113415356 CDS
T09026
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nss03021
]
113415356 (CHD1)
03036 Chromosome and associated proteins [BR:
nss03036
]
113415356 (CHD1)
Transcription machinery [BR:
nss03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
113415356 (CHD1)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
113415356 (CHD1)
SLIK complex
113415356 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
Motif
Other DBs
NCBI-GeneID:
113415356
NCBI-ProteinID:
XP_026528502
Ensembl:
ENSNSUG00000007884
UniProt:
A0A6J1UBY0
LinkDB
All DBs
Position
Unknown
AA seq
1802 aa
AA seq
DB search
MNGHSDEESTRNTSGESSQSDDDSGSASGSGSGSSSGSSSNGSSSQSGSSDSDSASESGS
QSESESDTSKEKKVQAKHPKVDGAEFWKSNPSILAVQRSAMLRKQQQQSKAASINSGSEE
ESSSSEDSGDDSSNEINRKKHKDEDWQMSGSGSISGTVSDSDMEESRDKSSCEESESDYE
PKNKVKSRKPPSRIKQKSGKKTAVQKKRQLDSSSSSSSDDDDDYDKRGSRRQATVNVSYK
EAEEAKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRIGRKGATGATTTIYAVEADGDP
NAGYDKSKESGDMQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWL
KNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSW
EDGALISKKFQSRIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPNYIGGHENLELRD
YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLT
SWQREIQTWAPQMNAVVYLGDITSRNVIRTHEWMHLQTKRLKFNILLTTYEILLKDKSFL
GGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPE
KFSSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQK
QYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNRQEALQNL
IRSSGKLILLDKLLIRLRERGSRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELR
KQALDHFNAEASEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQ
KKQVNIYRLVTKGSVEEEILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSAPFNKE
ELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENETGPLSVGDELLSQFKVAN
FSNMDEDDIELEPEQNSRNWEEIIPEVQRRRLEEEERQKELEEIYMLPRMRNCAKQISFN
GNEGRRYRNRRYSGSDSDSVSERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGG
PLERLDAIARDAELVDKSEIDLRRLGELVHNGCFKALKDNSSGQERAGGRLGKVKGPTFR
ISGVQVNAKLVISHEEELEPLHKSIPSDPEERKRYTIPCHTKAAHFDMDWGKEDDSNLLI
GIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLNKDIARKEAQ
RLSGIGGSKRRKIRMKKSKAIKAIKMKEELKSDTSPPPSDKSDEEEEEEEEDSKDEMVSL
KNSSKIKMEKENEEHLDADIALKKQADEKRETKENKKELKREKKEKEDKKEMKEKDTKEK
RESKGKEYTHKEKEVKEEKTNDYKSDSKDKIKKIPSADTPLHITASSEPVPISEDSEELD
QKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQ
IKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQETQQYNEQNINSGVNTTLIRNPDVE
RLKENTNHDDSSRDSYSSDRYLSQYHDHHKDRLHGDSYKKSDSRKRPYSTFSNGKDHRDW
DHYKQDNRYYNDSKHRKLDDHRNRDHRLNLEGSFKDSRSHLDHRIHLDHRSSSDYSHHKS
SRDYRYHSDWQMDHRASSSGPRSPLDQRSPYDSRSPLGHRSPFDHSTDHKSTPEHMWSNR
KT
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagcacaagaaacactagcggagaatcaagccaatca
gatgatgattctgggtcagcatctggatctggatctggttcaagttctggaagcagtagc
aatggaagtagcagccagtcaggaagcagtgattcagattctgcgtcagagtctggcagt
caatcagaatcagaatctgacacatccaaggaaaagaaagtccaagctaaacatccaaag
gttgatggagctgagttttggaaatcaaatccaagcattctcgctgtacagaggtctgca
atgctcaggaaacagcaacagcagtcaaaagcagcatccataaatagtggatcagaagag
gaatcatcaagtagtgaggattctggagacgactcatccaatgaaatcaacaggaagaaa
cataaagatgaagattggcaaatgtctggatcaggatctatttcgggaacagtttcagat
tctgatatggaagagagcagagataaaagtagttgtgaagagagtgaatctgattatgaa
ccaaaaaataaagtcaaaagcagaaagcctccaagcagaataaaacaaaaaagtggaaag
aaaactgcagtgcagaaaaaaagacaacttgactcatcatcatcatcatcatcagatgat
gatgatgattatgataaaagaggttctcgccgccaggcaacagtaaatgttagttataaa
gaagctgaagaagcaaagacggattcagatgatctcctagaagtctgtggagaggatgtt
ccacagcctgaagaagatgaatttgaaacaattgaaaaatttatggatagtcgcattgga
cgaaaaggagcaactggtgctacaaccactatctatgcagttgaagctgatggagatcca
aatgcaggatatgataaatcaaaagaatctggtgatatgcagtatttgattaaatggaaa
ggttggtcccatattcataatacctgggaaactgaagaaactctaaagcagcagaatgtt
agaggaatgaagaaactggacaactataagaaaaaggatcaggaaacaaagcgttggctg
aaaaatgcttctccagaagatgtagaatattataactgtcagcaagaacttacagatgac
ttgcataagcagtatcaaattgtagaaagaattattgcccattctaatcagaagtcagca
gcaggttatccagattattattgtaaatggcaaggtctcccttactcagagtgcagctgg
gaagatggagctctcatttctaaaaagttccagtcacgcattgatgagtactttagtaga
aatcagtcaaagactactccatttaaagattgtaaggttctgaagcaaagaccaagattt
gtggctttaaagaagcaacctaattacattggaggtcatgaaaacctagagttaagagat
tatcaattaaatggactaaattggttagcccattcatggtgcaagggaaacagctgtatt
cttgctgatgaaatgggtttgggcaaaacaatacaaactatctcctttttgaattactta
tttcatgagcatcagttgtatggacctttcctgctcgtagtacctctttccaccctgaca
tcttggcaaagagaaatccagacttgggctccccagatgaatgccgtagtttatttggga
gatattaccagtagaaatgtgataagaacacatgaatggatgcatctacagaccaaacgg
ttaaaatttaacattttattgacaacctatgaaattctgctgaaagataagtcattcctt
ggaggcttaaattgggcctttataggagtagatgaagcccatcgattaaaaaatgatgac
tccctcttatataagacattaatagacttcaaatctaatcatcgccttcttatcactgga
acacctctacaaaactccctgaaagagctgtggtccctgcttcatttcatcatgccagaa
aaattctcttcttgggaagattttgaagaagaacatgggaaaggaagggaatttggttat
gcaagtcttcacaaagaacttgaaccatttctgttgaggagagttaagaaagatgtagaa
aaatctctacctgccaaggttgaacaaattttaagaatggaaatgagtgcattgcaaaag
cagtattacaagtggattttaacaaggaattacaaagccctaagtaagggatcaaaaggc
agtacctcaggctttctgaatatcatgatggagctcaaaaagtgttgtaatcattgctac
ctcattaagccaccagatgataatgaattctataacagacaggaggccttacagaactta
atccggagtagtgggaagctaattcttttagacaagctgctgattcgtttacgagagcgt
ggcagtagagtacttatattctctcagatggtgcggatgctggacatcttagctgaatat
ttgaaatatcgtcagtttccctttcaaagactagatgggtcaataaaaggagaattgagg
aaacaagcactggatcattttaatgcagaagcctctgaggatttttgctttttactgtct
acaagagctggaggtctaggtataaatttggcatctgctgatactgttgtcatatttgat
tctgactggaaccctcaaaatgatctgcaagctcaggctagagcacacagaattggacaa
aaaaaacaggttaacatttatcgtttagtgaccaaaggatcagtagaggaagagattttg
gagagagccaagaagaaaatggttttggatcatctagtcattcagagaatggatactaca
ggaaaaactgtattacatacaggctctgcaccctctagctctgctccttttaacaaagag
gaactgtcagctattctaaagtttggtgctgaggaacttttcaaagaaccagaaggggaa
gaacaggaaccgcaggaaatggacatagatgaaatattgaagagagctgaaacacgggaa
aatgaaactggaccattaagtgtgggagatgaattgctgtctcagtttaaggtagccaac
ttttccaatatggatgaagatgatattgaattggagcctgaacaaaattcaagaaactgg
gaagaaataattccagaggtccagagacgaagattagaagaagaagaaagacaaaaagaa
ttggaagaaatttatatgcttccaagaatgagaaactgtgcaaaacaaataagtttcaat
ggaaatgaaggaagacgttatagaaacagaagatactctggatcagatagtgactctgtc
tcagaaagaaaacgaccaaaaaaacgtggaagaccacgtaccattccccgggaaaacatt
aaaggatttagtgatgcagagattcggaggtttatcaagagttacaagaaatttgggggg
cctcttgaaaggttagatgccatagctagagatgctgaattagtggataaatctgagata
gatctccggcggcttggagagcttgtacataatggatgcttcaaagctttgaaagacaac
tcatctggacaagaaagagcaggaggtagacttggaaaagttaaaggcccaacattccga
atatcaggggtacaggtaaatgcaaaattggtcatctcacatgaagaagagctggaacca
ttgcataaatccattccttcagatccagaggaaaggaagagatacaccattccttgtcac
actaaggctgctcattttgatatggattggggtaaggaagatgattccaaccttctaata
ggcatttatgagtatggatatggtagctgggaaatgataaaaatggacccagatctcagc
ttgacacacaagattctaccagatgacccagataagaaaccccaagccaaacagttgcaa
acccgtgcagactacctcataaaattattaaataaggacattgcaagaaaagaagcacaa
agactttctggaataggaggttcaaagagaagaaagataagaatgaaaaagagcaaggcc
ataaaagcaataaaaatgaaagaggaattaaagagtgacacatcaccaccaccttcagat
aagtctgatgaagaggaggaagaagaagaagaagatagcaaggatgaaatggtttctttg
aaaaattcaagtaagataaaaatggagaaagaaaatgaagaacatcttgatgcagatatt
gccttgaaaaagcaggctgatgaaaaaagagaaactaaggaaaataaaaaggaactaaaa
agggagaaaaaagaaaaagaggacaagaaggagatgaaagaaaaagatacgaaagaaaag
agggaaagcaaagggaaagaatacacccacaaagaaaaagaagttaaagaagaaaagaca
aatgattataaatctgatagcaaagacaaaataaagaaaatcccttcagcagacacacct
cttcatataacagcaagcagtgaacctgttcctatatcagaagattcggaagagttggat
cagaaaacgttcagtatatgcaaagaaagaatgaggcctgtcaaagcggcattaaaacag
ctggatagaccagagaaaggactttcagaaagggaacaactagaacatactagacagtgt
ctcataaaaattggagaccatataactgaatgtctaaaagaatacacaaatcctgaacaa
attaaacagtggagaaagaatttgtggatttttgtttccaaatttactgaatttgatgct
agaaaactacacaaattgtacaaacatgcaattaaaaagcgccaagaaacacagcagtat
aatgaacaaaatatcaatagtggagtgaacacaactttgattagaaatccagatgtggaa
cgattaaaagagaacacaaatcatgatgacagtagtagggacagttattcctctgataga
tacttatcacagtatcatgatcatcacaaagacagacttcatggagattcttacaaaaaa
agtgattcaagaaaaaggccctattccactttcagcaatggaaaagatcatagagattgg
gatcactataaacaggataatagatactacaatgatagtaaacacagaaaattagatgat
cacagaaatagagatcacagattgaatctggaaggaagttttaaagacagtcgatcacat
ttagatcaccggatacatttagatcatcgatccagttcagactacagtcatcataaatct
tcaagagattataggtatcactcagactggcaaatggaccacagagcttccagtagtggg
cccaggtcaccattagatcaacggtcaccttacgattctcgatctcctttaggacataga
tctccttttgaccattcaacagatcataaaagtacaccggaacatatgtggagtaatcgg
aaaacatag
DBGET
integrated database retrieval system
