Notechis scutatus (mainland tiger snake): 113415496
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Entry
113415496 CDS
T09026
Name
(RefSeq) nuclear cap-binding protein subunit 1-like isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03013
Nucleocytoplasmic transport
nss03015
mRNA surveillance pathway
nss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113415496
09122 Translation
03013 Nucleocytoplasmic transport
113415496
03015 mRNA surveillance pathway
113415496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113415496
03041 Spliceosome [BR:
nss03041
]
113415496
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
113415496
Spliceosome [BR:
nss03041
]
Common components
Common spliceosomal components
Cap binding complex
113415496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Phage_GP20
DUF1003
Motif
Other DBs
NCBI-GeneID:
113415496
NCBI-ProteinID:
XP_026528707
Ensembl:
ENSNSUG00000015389
UniProt:
A0A6J1UCL4
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MSRRRHRDENDGESGREAEEQQHKRRRTYETVAEMLEDLISTLGEESSSPLESNVDNVTK
VLEAHLPNFKSKILRLLCTVARLLPQKMTLYTTLVGLLNAKNYNFGGEFVEAMIRQLKEC
MKVNLYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVNVTQEEDVPQVRCDWYVYAFLS
SLPWVGKELYEKKDTEMEHILSTVENYLKRRQKTHVPMLQVWSVDKPHPQEEYLDCLWAQ
IQKMKKDHWQERHIPRPYLAFDSVLCEALQHNLPPFTPPPHAADSVYPMPRVTFRMFDYT
DDPEGPIMPGSHSVERFVIEENLHCIIRSFWKERMTCAVQLTSYPGNHKIPLNYHIVEVI
FAELFQLPVPPHMEIMYTTLFIELCKLQPGSLPQVLAQATEMLYMRLDTMNTICIDRFIN
WFSHHLSNFEFRWSWEDWSDCLSEDLDRARPRFVREVLEKCMRLSYHQRIIDIVPASFSV
LTPANPTCIYKYGEESNKSLPGYNVALCLNIAIKNKVSNDDIFTILKDVPNPNQDNDDEG
FSFNPLKIDVFVQALLHLASKSFSHSFSALGKFREILKTLAESDEGKLHILRVMYEVWKN
HPQMIAVLVDKMIRTQIVDCAAVANWIFSPELSHDFTRFYIWEILHSTIRKMNKHVMMIQ
KELEEAKERLAKQHKRRDDVRSNERGNWPLEEQIERLQEKVESAQSEQKNLFLVIFQRFI
MILTEHLARSEAGGIDVITPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDHHI
LAIFQQFCALQA
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaggcggcaccgggacgagaacgatggtgagagcgggagggaagcggaggaa
caacagcacaagagaagaagaacatatgaaacagttgcagagatgttggaagacttaata
agcacattgggagaagagagttcttctcctttggaaagtaacgtagataatgtgactaag
gtgttggaggcacatctgccaaacttcaaaagcaaaatactgagactcctttgtacagtt
gcacgtctgctaccacaaaagatgaccctttacacaactcttgttggcttgctgaatgcc
aagaactataattttggtggagagtttgtagaagccatgatacgtcagctgaaagaatgt
atgaaagtcaacctgtacaatgaagctgtctatttggtgcgctttctttctgatcttgtg
aattgtcatgtaatagctgcaccctcaatggtagccatgtttgagaatttcgttaatgtg
acacaggaggaggatgtacctcaggttcgatgtgattggtatgtgtatgcatttctgtca
tctttaccttgggtgggaaaggaactgtatgagaaaaaggatactgaaatggagcacatc
ttatctactgttgaaaactatctgaaacggcgtcagaagactcatgtgcctatgcttcaa
gtttggtccgttgataaaccacatccccaggaagagtacttagattgcctttgggctcag
attcagaaaatgaagaaggaccactggcaagagaggcacatcccgaggccatacctggca
ttcgacagcgtcctttgtgaagcactgcagcacaacctgcctccttttacgccgccaccc
cacgcagcagattccgtttacccgatgccaagagtcaccttccgaatgtttgactacact
gatgatcctgaaggcccaattatgcctgggagccactctgttgaaagatttgtgatcgaa
gaaaatcttcactgcatcatcagatctttctggaaagagagaatgacatgtgctgtccag
ttaacaagctatccaggaaaccacaagatccccctgaattaccatattgttgaggtgatc
tttgctgagttgtttcagcttcctgttccgcctcacatggaaatcatgtacacaacactt
tttattgaactctgtaaacttcagcctggatctttacctcaagttctcgcacaagctaca
gaaatgctgtacatgcgcttagatacaatgaatactatctgcatagatcggttcattaat
tggttttcccaccatcttagtaattttgagttccgctggagctgggaagattggtcagat
tgtctttctgaggatcttgacagagccaggcctaggtttgtaagagaagtactggaaaaa
tgcatgaggctttcctaccaccaacgaataatagatattgttcctgctagtttttcagtc
ttgactcctgcaaatccaacctgtatttataaatatggagaagaaagtaacaaatctctt
cctggatacaatgttgcactctgtttaaacattgccatcaaaaataaagtgagcaatgat
gacattttcactattctgaaggatgtgcccaatcctaatcaggataatgatgatgaaggc
ttctcattcaatcctttaaaaatagatgtttttgtccaggcactcttgcacttagcctca
aaatcattcagtcactctttcagtgctctgggaaaatttcgagaaatcctcaaaactctg
gctgaaagtgatgaaggaaagcttcatattctcagagttatgtatgaagtatggaaaaat
catcctcagatgattgctgtactggtggataagatgattcgaacacagattgtggattgt
gctgcagtggcaaattggattttctctccagagctatctcatgattttacaagattttat
atttgggagatcttacactctaccattcgtaagatgaacaagcatgtgatgatgatccaa
aaggagctagaagaagccaaggaaagattagccaagcaacacaaaaggcgggatgatgtc
cgaagcaatgagaggggaaattggccccttgaagaacagatcgaacgcttgcaagaaaaa
gttgaatcagctcaaagtgaacaaaaaaatcttttccttgtaatatttcagcgtttcatt
atgatcctaacagagcatttagcacgaagtgaagcaggagggattgatgtaattacacct
tggtacaagaactgtatagagaggctgcagcaaatcttcttacagcatcatcagatcatc
caacaatacatggtgactttggagaaccttctatttacagcagaattggatcatcacata
ctggctatatttcagcagttctgtgcactccaggcttga
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integrated database retrieval system
