Notechis scutatus (mainland tiger snake): 113415656
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Entry
113415656 CDS
T09026
Symbol
FN1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04510
Focal adhesion
nss04512
ECM-receptor interaction
nss04810
Regulation of actin cytoskeleton
nss04820
Cytoskeleton in muscle cells
nss05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113415656 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113415656 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113415656 (FN1)
04810 Regulation of actin cytoskeleton
113415656 (FN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
113415656 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nss04131
]
113415656 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nss04147
]
113415656 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
nss00536
]
113415656 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
nss04990
]
113415656 (FN1)
Membrane trafficking [BR:
nss04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
113415656 (FN1)
Exosome [BR:
nss04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
113415656 (FN1)
Glycosaminoglycan binding proteins [BR:
nss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113415656 (FN1)
Domain-containing proteins not elsewhere classified [BR:
nss04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
113415656 (FN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn2
Fn3_Dep-1_2nd
Fn3_Dep-1_4th
FN3_Tor_3rd
Big_10
Motif
Other DBs
NCBI-GeneID:
113415656
NCBI-ProteinID:
XP_026528935
Ensembl:
ENSNSUG00000004060
UniProt:
A0A6J1UF28
LinkDB
All DBs
Position
Unknown
AA seq
2288 aa
AA seq
DB search
MPDSRSKRAILLVLTLCSGAGVWGSQPRGGKGKRETQQHIVQPSLPVGQNKQGCYDNGQH
YQINQQWERIYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKHTGTTYRVGETYERPKDS
MIWDCTCIGAGRGRISCTIANRCHEGGESYKIGDTWRRPHETGGYMLECVCLGNGKGEWT
CKPVAERCYDNTAGTSYVVGEVWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTKK
SYRIGETWSKKDNRGNLLQCICTGNGRGEWKCERHSSLQATGVGSASATITDVRTALYQP
QPQPAPYGHCVTDSGMMYILGMQWLKAQGSQHMLCTCLGNGISCQETAVTQTYGGNSNGE
PCVFPFTYNGRTFYSCTSEGRHDGNLWCSTTSNFDQDKSYSFCTEQNVVVQTRGGNSNGA
LCHFPFLYNNRNYTDCTSEGRRDNMKWCGTTSNYDVDQKFGFCPMAAHEEICTTNDGVMY
RVGDQWDKQHDMGHMMRCTCVGNGRGEWTCIAYSQLRDQCIVDGITYDVNQTFHKRHEEG
HMLNCTCFGQGRGRWKCDPIDQCQDSESQTFYQIGDSWEKHAHGVRYQCYCYGRGIGEWH
CQPLNTGSPGHPVQVIITDVPIQPDSHPIQWIVPESSHISNYILRWKPKNSRVQWKEATI
PGYLNSYTISSLKPGVLYEGQLISVQHYGQREITRFEFTTSSTTAISSSRVTGETTALPS
VVSISESVTEITANSFVVSWVSASDTVSGFRVEYELSEDGDEPKYLDLPNTVNSVSIPNL
LPGRNYIIKVYQISEEGEQNLILSTTQTTAPDAPPDHIVENVDDTSIIVSWRRPKAPITG
YRVVYTPSLEGSSTELNLPESATSVTLSDLMPGVQYNISIYAVEENQESSPIFIQQKTTG
VPVADDIHPPQQLQFLEVASDKITIMWSPPDSAVIGYRVEVIPVNRPGEHGQRLPISRYT
FAEVTELLPGTTYLFKIYAIGQNTESEPLTGEQTTKLDGPTNLRLVSETPSTALVTWKSP
RARLTGYQLTVQPVPDGHPKQYTVGPSAAKYLLRNLQPGSEYTVSLVAVKDNQKSNPEKG
TFTTLQSTGSVPPYNTEVTETSIVVTWIPAPRLGFKLGVRPSQGGEAPREVISESGSIVI
SGLTPGVEYTYSINVIKDGQERTTPIVKTVITPPSPPTNLHLDSNPDTGILTVSWGKSTT
PDITGYRITTIPTNGQEGYTLEEQVQAEVTSCIFENLSPGLEYNVSVYTLKDNQESLPIS
ETITQAVPPPTDLRFTNVGPDTMRVTWTPPASIELTSFLIRYSPMKNKEDIAELSISPSD
NAVVLTNLLPGTAYLIKVYSVYEQHESKPLSGEQKTGLDSPTGLDFSEITAHSFIVHWIA
PRAPISGYKIRHHLEQGGSRPKEVRVAPSRNFITLTDLIPGSEYVVSVSAFYGKEESLPL
IGQQSTVSDVPRDLHVTATGPTSLVISWDAPAVTVRYYRITYGETGGSGPVQEFTVPGHV
STATIPGLKPGVDYTITVYAVTGRGDSPASSKPVSINYRIEVDTPSQLEVTDVQDNSLTV
QWQPSSSPVTGYRVTASPKDNRSPTKTRVLSAEQTEVTIDELQPTIEYVVSVYAQGPNGE
SKPLVEKVVTTIPPPTNLKFIQVAPTSLTLTWTAPNVKLTGYRVRINPKEKNGPMKEINL
APDSTSAVISGLMVATKYEVSVYALKDSLTSRPTQGVVNTLENVSAPRRARVTDVTERTI
TITWRTKTEAITGFQIDAIPAGGQNPIQRTIGPDARTYTITGLQPGTDYKIFIYALNENA
RSSPAELDASTAIDAPSNLRFLTTTSNSLLISWQPPRTKITGYIIKYEQVGGPTRELFPR
PHPGITEATITGLEPGTEYIIYITAVKNNQKSEPLIGRKKTDELPRLVTPPHPGERVTEI
LDVPSVLENVPYLTNNPYDNGNGIPIPGSSGQQSILSNPGQQVIVEEFGSRTPTTPATPG
GAKPNKEEQPVVVIHHPIQVPDVDKPSYHHTLLSKDNYTRPQEALSQTTISWTPYTDSSE
YIISCQPVSAEEEPTEIKVPGVYSSATLTGLTRGATYNIIVEAVKNQRRHRVLEEMVTVG
NDVSGRLPTDDVCYDTFTGSFYSIGDEWERMSETGFKLWCQCLGLGSGHFRCDSSKWCHD
SGMNYKIGEKWDRHGENGQVMSCTCLGNGKGEFKCDPHEATCYDDGKMYHVGEQWQKEYL
GAICSCTCFGGQQGWRCDNCRRPGESEGSASRTYSQREQQSPNTNIHCPIECFYPLHLHS
DAQIQRGD
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
atgccggacagccgatcaaagcgagcgattcttttggtattgaccctttgttcaggggca
ggggtctggggttctcaaccccgcgggggaaaaggcaaaagggaaacgcagcagcatatc
gttcagccctctctgccggtcggccagaacaaacagggatgctatgacaatggacaacat
tatcagataaaccagcagtgggagcgcatttacttgggaaacactctagtctgtacttgc
tatggaggcagtcgaggattcaactgtgagagcaaacctgagccggaagaaacctgtttt
gataaacacactgggactacttatcgagtaggggaaacctatgaacgcccaaaggattcc
atgatctgggactgtacttgtattggggctgggcgtggaagaatcagttgcactattgca
aatagatgtcatgaaggtggcgagtcctacaagattggtgatacctggcgcaggcctcac
gagacaggaggctacatgttggaatgtgtctgtcttggcaacggaaagggtgaatggact
tgcaaaccagttgctgagcggtgctatgataatacagctgggacatcatacgttgttgga
gaagtttgggaaaagccatatcagggctggatgatggtggattgcacttgccttggagaa
ggcagtgggaggattacttgcacttccagaaatagatgcaacgatcaagataccaagaaa
tcttatcgaattggagaaacctggagcaagaaggataacagaggaaatctgcttcaatgc
atctgcacagggaatggcagaggagaatggaaatgtgaaaggcattcctctttgcaagcc
acaggcgtaggcagtgcatctgcaaccatcacagatgtacgaactgcactctaccaacca
cagccccaacctgctccttatggtcattgtgtaactgacagtggtatgatgtatattttg
ggaatgcagtggcttaaagcacagggaagccagcatatgctttgtacttgtctgggcaat
ggaatcagctgccaggaaacagctgtgacccaaacctacggtggcaattccaatggagag
ccttgtgttttcccattcacatataatggaaggactttctattcatgcacttccgaagga
cgtcatgatgggaatctctggtgtagtacaacctccaactttgaccaggataagagctac
tccttttgtacagagcaaaatgtggtggttcagacacgtggtggaaattccaatggtgcc
ctatgtcactttcctttcctttataataatcggaattatactgactgtacttctgaagga
cgaagagataatatgaagtggtgcggaactacctcaaactatgatgttgatcaaaagttt
ggattttgtcccatggcagctcatgaagaaatttgtacgacaaatgatggtgttatgtat
cgtgttggagatcagtgggacaaacagcatgatatgggccatatgatgagatgcacttgt
gtgggaaatggacgtggagaatggacctgcattgcatattcccagctcagagatcagtgt
atagttgatgggatcacgtatgatgttaatcagacttttcacaaacgtcacgaagaagga
cacatgctgaactgtacttgttttggccaagggcgggggagatggaaatgtgatcctatt
gaccagtgtcaagattcagaaagccaaaccttttaccagattggggattcatgggagaag
catgctcatggagtgagatatcagtgctactgttatggccggggtattggagaatggcac
tgccagcctttgaacacaggttcccctggtcaccctgttcaggtgattatcacagatgtt
ccaattcaacctgattctcatcctatccagtggattgtacctgagtcctctcacatttcc
aattatattcttcgctggaaaccgaaaaattctcgagtgcaatggaaagaagctacaatt
ccaggctatttaaattcctatacaatctcaagtctgaaacctggtgtcctttatgaggga
caacttataagtgtgcagcattatggtcagagagaaatcacccgttttgaattcactacc
tcaagtacaacagctatttcatctagtcgtgtgacgggagaaacaacagcccttccctct
gtcgtctctatttctgaatctgtcacagaaatcacagccaacagctttgtggtctcttgg
gtttctgcctcagacactgtgtcaggatttcgcgtggaatatgaactgagtgaagatggt
gatgaacctaaatatcttgatcttccgaacacagtcaattcggttagcattcccaacttg
cttccgggtcgtaactacattatcaaagtctatcaaatttccgaggaaggagaacaaaat
ctaattctttcaacaacacagacaacagcacctgatgctcctcctgatcatattgtagaa
aatgttgatgatacttcaataattgtcagttggagaagacccaaagctccaatcacaggt
taccgggtcgtttatactccttcgctggaaggtagcagtacagaactcaatctccctgaa
tctgctacatctgtgacactcagtgacttgatgcctggtgttcagtacaatatcagcatt
tatgctgtggaagagaaccaggaaagcagtcctattttcattcagcagaaaactacagga
gtgccagtggcagatgacattcatcctccccagcaacttcaatttctggaagttgccagt
gacaaaatcaccatcatgtggagcccccctgatagtgcagtgattggctaccgtgtagag
gtcattccagttaaccgccctggagaacatggtcagaggttacccattagcagatataca
tttgctgaggtcacagaacttttgcctggaacaacgtaccttttcaagatctacgctatt
ggacaaaacacggagagtgaaccattaactggagaacaaacaacaaaacttgatggtcca
accaacttgcggcttgtcagtgagacaccctctactgcactagtcacatggaagtccccg
cgagctcgtcttacaggataccaacttactgtccagcctgtcccagatggtcatccaaaa
caatacactgtggggccatcagccgccaaatacctgctgaggaatttgcaacctggctct
gagtatactgtgtctctagtggctgtcaaggataaccaaaagagcaatccagaaaaggga
accttcacaacattgcaatccacaggctcagttcctccctataacactgaagtgacagag
acatccattgttgttacctggatacctgcacctagacttggttttaagctaggagtgaga
ccaagccaaggtggagaagctccaagggaagtcatctcagaatctggaagcattgttata
tctggcctaactcctggtgtagaatatacctacagcattaatgttattaaggatggtcaa
gaaagaacgacacctattgtcaagacagtaatcacaccaccatctcctccaacaaacttg
catcttgattctaaccctgacactggaatccttactgtttcttggggaaaaagcacgact
ccagatatcactggatacagaattacaacaatccctacaaacgggcaagaaggctacact
ctggaggagcaagtgcaagcagaagttacatcctgcatttttgaaaatttgagccctggt
ctggaatacaatgtcagtgtttacacactcaaagataatcaagagagtttgcccatctct
gaaaccattacacaagctgttcctccaccaacggatcttcgtttcaccaatgtgggacct
gacactatgagagtaacctggactccaccagcatctattgaattgaccagcttcttgatt
cgctactcacccatgaagaacaaggaggatattgcagaactttccatttcaccttcggac
aatgccgtggttttaacaaatctccttcccggtacagcatacttgatcaaggtttacagt
gtatatgaacaacatgagagtaaacctctgagtggagagcagaaaacaggccttgattcc
cctactggactggatttctcagagataacagcccattctttcattgtccattggattgct
cctcgtgcccccatttctggctataaaatacgccatcaccttgagcaaggtggaagtaga
cccaaagaagtccgtgttgcaccgtctcgcaacttcatcactctcacggatctgattcca
gggtcagagtatgtggttagtgtatctgccttctatggcaaagaagagagtttgccctta
attggacagcaaagtacagtttctgatgttccaagagatctacatgtgactgctactggc
cccactagtctagtcatttcttgggatgcacctgctgttacagttcgatactacagaatc
acatatggagaaacaggtggcagtgggcctgttcaagagtttactgttcctggtcatgtc
tccactgctacgattcctggtcttaagcctggagtagattataccatcactgtgtatgct
gtcactgggcgaggggacagtcctgccagtagcaaacctgtcagcataaattaccgaata
gaggttgatacaccatcgcagctagaagttactgatgttcaagacaacagccttactgtg
cagtggcagccttcttcttccccagtgactggttatagagtgacagcttcccccaaggat
aaccgtagccccaccaaaactagagttctttctgcagaacaaaccgaagtcacaattgat
gaactacaacctacaattgagtatgtggttagcgtctatgcccaagggccaaatggagaa
agcaagcctttggttgagaaagttgttacaacaatcccacctcctacgaatctgaagttt
attcaggttgctccaacaagtctcacactaacttggactgcaccaaatgtgaagcttact
ggatatcgagtgagaataaatcccaaggaaaagaatggcccaatgaaagaaattaacctt
gctccagatagcacatctgctgttatctctggactaatggtggcaactaaatatgaagtt
agtgtctatgctctgaaggactctttgaccagcagacctacccaaggtgtagttaatact
ctggaaaatgttagtgctccccgtagggctcgtgtcacagatgtcacggagcgaaccatc
acaattacctggcgcaccaagacagaggcaatcacaggtttccagatagatgccatccct
gcaggtggtcagaatccaattcaaagaacaattggtcctgatgctagaacctacaccatt
actggcttgcaacctggcactgattacaagatttttatctatgcactgaatgagaatgct
cgcagctccccggcagagcttgatgcttccactgccattgatgcaccttccaatctgcgc
ttcctcacaactacaagcaactccttgttgatcagttggcagccaccacggaccaaaata
acaggctacataatcaaatatgagcaagttggtggcccaacccgggagttatttcctcgt
cctcatcctggtattactgaggccactatcacaggtctggaaccagggacagaatatatc
atttatataactgctgtgaagaacaatcagaagagtgaaccattgattggaaggaaaaaa
acagatgagcttccccggctggtaactccaccgcatcctggtgaaagggtgacagagata
ttggatgtgccttctgttctggagaatgtaccttacctcacaaacaatccctatgacaat
ggaaatggtatcccaattccaggttcttctggtcagcaatccatcctgagcaacccaggt
caacaagtcattgtggaagaatttgggtctcgaacccccacaactccagcaactccagga
ggggctaaaccaaacaaagaagaacagccagtggtggtgatccatcatcccattcaagtt
cctgatgttgacaaaccttcttatcatcatacccttctatccaaggataattacacaagg
ccccaggaagcactttctcagacaactatttcatggacaccttatacagatagctctgaa
tacattatctcttgccagcctgttagtgctgaagaagaacctactgagatcaaagttcct
ggcgtgtattctagtgctactcttacgggtcttactcggggggcaacctacaacatcata
gtagaagcagttaaaaatcagagaagacacagagttcttgaagagatggtcaccgtgggc
aatgatgtttctggaagattacccactgatgatgtatgttatgataccttcactggttct
ttttattccattggggatgagtgggaaaggatgtctgaaacaggattcaaattgtggtgt
cagtgtttaggtcttggtagtggacatttcagatgtgattcttcaaagtggtgtcatgac
agtgggatgaactataagatcggtgagaagtgggataggcatggagagaatggccaggtg
atgagctgcacttgccttggaaatggaaaaggagaattcaagtgtgaccctcatgaagca
acttgttatgatgatggcaagatgtatcatgtaggagagcagtggcagaaagaatatctt
ggggccatctgctcatgtacttgtttcggaggacaacagggctggcgttgtgacaattgc
cgtagacctggtgaatctgaaggttctgctagtcgaacctattcacagagagagcaacaa
agcccaaacactaacatccattgtccaattgaatgcttctatcccttacatctacactca
gatgcacagatccaacgtggagattaa
DBGET
integrated database retrieval system
