Notechis scutatus (mainland tiger snake): 113415658
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Entry
113415658 CDS
T09026
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113415658 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113415658 (BARD1)
04121 Ubiquitin system [BR:
nss04121
]
113415658 (BARD1)
03036 Chromosome and associated proteins [BR:
nss03036
]
113415658 (BARD1)
03400 DNA repair and recombination proteins [BR:
nss03400
]
113415658 (BARD1)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
113415658 (BARD1)
Ubiquitin system [BR:
nss04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
113415658 (BARD1)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113415658 (BARD1)
DNA repair and recombination proteins [BR:
nss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
113415658 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
zf-RING_6
BRCT
BRCT_2
ANK_LRRK2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_10
NIBRIN_BRCT_II
RTT107_BRCT_5
zf-RING_5
Prok-RING_4
MetOD2
Motif
Other DBs
NCBI-GeneID:
113415658
NCBI-ProteinID:
XP_026528940
UniProt:
A0A6J1UF33
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MRPRIFRSRSGNEPAGHMAQEQQPQSGSPWKETRLALKSLGECLKCSLCTKILKKPVNLA
TCDHVFCLTCVGTACPICQVPIMKRDVKINSKLVIIIKLYSKLQTLQDKNFSDPENNLSA
LGKKVEEAETKKKQIKMCFSPHSRKLKFTLKTSPKKLEQLKESVKDSGSCNLTSIYDFVS
SPPHEKPFREEQTHQQKYKKKLRKNTLKDFSKQGDMFGGQQENSSERYKVGLNESKDPIP
SSGSKNTPVLRLITGTELTENAGELSTSNVRPVKPKEKSSNCNFSLMPNVFVGDLTSEEW
LSLSKETKKLKCDRQFAGSPISLPKSHKMKKGTIQQKSRLLKKASEQLPGNSVAAFPLRD
CAASSPSLPLPGITSPLRNLEDFVCASDPELPKVSRNCAEKEMFLKKFPKNLSAKRNHKG
ESLLHTASIEGNLSAVECLLKKGADPNIKDYAGWTPLHEACNHGHKQIVELLIRHGALLD
VTGYENDMPLHDAVKNGHIEIVELLLLHGASRDVVNIFGHKPVDYAETEEMKSLLMQPRK
NDSSIIQYAECKNLNYCKKGPVVLLGSGLDPDQQLMLSKLATILKVTVCTDFNNSVTHVV
IPANPVRTTMKCMLALLSGCWILTFMWVEASLRSGTFEQEEKYEVDGGPRQGRLNTEQLL
PKLFDGCYFYFLGIFKEHKKDDLKELVKSGGGQILQRKPKSDNDVTQTINRVAYHAEITS
DQSFCTQYIIYDASSNYKPQNVRQGKVWEVPSRWLIDCVMSFQLLPVKK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccccgtatatttcggagccgttccggtaatgaacccgccggccacatggcgcag
gagcagcaaccgcagtccggaagcccgtggaaagaaacgcggctggctttgaaaagcttg
ggcgaatgcctgaagtgctccctttgtactaaaattctgaagaaacctgtgaacctagca
acttgtgatcatgtcttctgtctaacttgtgtaggcacagcttgcccaatatgtcaggta
ccaatcatgaaaagggatgtgaaaataaacagcaaactagtcatcatcatcaaactctac
agcaaattgcaaactttgcaggacaagaacttctcagatcctgaaaataacttgtctgct
ttgggaaagaaagttgaagaggcagaaactaaaaagaaacaaatcaaaatgtgtttcagt
cctcacagtaggaagctgaaattcaccctgaagacaagcccaaagaaattagagcagctg
aaggaatcagtcaaggacagcgggtcttgtaacttaacctccatctatgactttgtttct
tcacctcctcatgagaagcctttcagagaggaacaaacacatcagcagaaatataagaag
aagctaagaaaaaatactttaaaagacttcagcaaacagggggatatgttcggaggccaa
caggaaaactccagtgaaaggtataaagtaggcctaaatgaaagcaaagatccaatcccc
agttctggctcaaaaaataccccagtgctgaggctgataaccgggacagagcttacagag
aatgcaggtgaactctccacaagcaatgttagacctgtgaaacctaaagagaagagtagc
aattgcaacttttctcttatgcctaatgtttttgtgggagatctgacttctgaagagtgg
ctttctttgtcaaaggaaacaaaaaagttaaagtgtgaccggcagtttgctggctctccc
atttctttgcccaagagtcacaaaatgaaaaaggggactatccaacagaagtcacgattg
ctgaaaaaggcctcagagcagttgcctgggaattctgtggcggcctttcccctcagggac
tgtgcagcttcttccccatctctgccattgcctggaatcacatcaccactaaggaatttg
gaagactttgtatgtgccagtgacccagaacttccaaaagtgtctagaaattgtgctgaa
aaggagatgttcctcaagaaatttcccaaaaacttatcagccaagagaaaccataaaggg
gaatctttactccatactgcttctattgagggtaatctttctgctgttgaatgcttgttg
aaaaaaggagctgatcccaacattaaagactatgctggttggaccccactgcatgaagcc
tgtaatcatggacataagcagatagttgaattattgataagacatggggcactgctggat
gtgactgggtatgagaatgatatgccacttcacgatgctgtcaagaatggacatatagaa
atagtggaactgctgcttctgcatggagcttctcgagacgtagttaatatatttggtcac
aaacctgtggattatgctgaaacagaagaaatgaaatcgcttctaatgcaaccaagaaag
aatgattcttcaattatacagtatgcagaatgcaaaaacctaaattactgtaaaaaagga
cctgttgttctccttgggagtggtcttgatccagatcaacagctgatgttaagcaaattg
gccacaattttgaaggttacagtatgtacagattttaacaattctgtgacacatgttgtt
attcctgcaaatcctgtgcgaactactatgaagtgcatgctggcacttttatctggatgt
tggatcttgacatttatgtgggtagaagccagcttgaggagtggcacttttgaacaagaa
gagaaatatgaagtagatggtggtcctcgacaaggccgcctgaacacagaacagcttctg
ccaaaactttttgatggctgctacttctatttcctgggaatatttaaagagcacaagaaa
gatgacctcaaagaactggtgaaatctggagggggacagattctccaaaggaagcctaaa
tcagataatgatgtgactcagacaatcaatagagtagcctatcatgctgagattacttct
gaccagagtttctgtacacaatatataatctatgatgcctcttctaactacaaaccacaa
aatgttcgtcaaggaaaggtttgggaagtgccctccaggtggcttattgactgtgtgatg
tcatttcaactgttgcctgttaagaaatga
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integrated database retrieval system
