Notechis scutatus (mainland tiger snake): 113415875
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Entry
113415875 CDS
T09026
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
113415875 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nss01009
]
113415875 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nss04515
]
113415875 (PCDH20)
Protein phosphatases and associated proteins [BR:
nss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113415875 (PCDH20)
Cell adhesion molecules [BR:
nss04515
]
Cadherins
Protocadherins
113415875 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
113415875
NCBI-ProteinID:
XP_026529244
UniProt:
A0A6J1UNA6
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MRRRGNETRRSSPSALESSWRRGKQSRRLAMGQRPSPGSRRATGQRTLPNVFIFLLFLEP
FNCFASYSRASELFYSINEGLPAGFLIGNLAQDLQLLGTAEGEEKGEPLRKQETDQWGGS
PLSFSFASQGLGSQYINLDNQTGVLCTSAQEIDRETLCLEDNVGSTVVSSSSSSPLPSLE
SCLLLLDVLVLPQEYFRLVKVKIAIHDINDNAPWFPVPQIHLSVPENSPINTRLAIEHPA
VDPDMGTNGVQTYQLQQDYGVFTLDVEENESGERTPYLIVMGALDRENTDQYVTLIIAED
GGIPPLVGSATLTIGISDINDNCPQFNETQISVTIFGNSSTGLHIASVHAVDIDHGINAE
ITYSYSQKVSFLSRTLFRLNESTGVINLFKRINGDTPLLHRLSVLANGPGCIPAVITVLV
SIIKVTMRPPEVIPRFIANEAEGVVYLRELEPIHTPIAFFTIKDPDEKYKVDCYLEGGGP
FQLTPYQPYRNEYLLETTKTLDYEIQQLYEISVVAWNTEGFHVNKIIKVQILDDNDNSPV
FSQALVELSIEENNAPNAFLTKLHATDADSGERGQVSYFLGPEAPSYFSLDKVTGILTVS
TQLDREEREKYRYTVRAVDSGVPPRESIATVTLSVLDKNDNSPRFINKDFSFFVPENFPG
FGEIGVISVTDADIGQNGWVALSVVNRSDIFVIDTGKGVLRAKVSLDREQQSSYILWVEA
VDGGDPPLSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAIDNDT
GMNAVIAYSIIGRRGPRPESFKIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPLH
STVMVNLFVNDTVSNESYIESLLRKESDINIEEKEPQISIEPTHRRAEAISCMPTLVTLS
IISLTSISLVTGMGIYICLRKGKKYHRGDEGLEVQIPLNGRIDLHRLEKKQVEISNI
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgccgagggaatgagacgcggcgcagctcgccctcagccctcgagtccagctgg
cggcgaggcaagcagagccggcggctggctatggggcagcgacccagccctgggagcaga
agagccaccggtcagaggacgctgccgaacgtgttcatcttcctgcttttcttagaaccg
tttaactgctttgcgagctacagtcgggccagcgaactcttctacagcatcaatgaagga
ctccctgctggcttcctcattgggaatctagcccaggatttacagcttctggggactgca
gagggagaagaaaaaggagagccgctgaggaagcaggagactgaccaatgggggggaagt
cctctttccttcagtttcgcctcccaaggactgggaagccaatacatcaacctggacaat
cagacaggtgtcctgtgcacctcagcccaggaaattgaccgagaaacgctctgcttggag
gataatgttggctccacggtggtttcgtcttcttcctcttctccacttccatccttggag
tcgtgcttgcttttgctagatgtcctggtgttgccccaggagtatttccgtctggtcaaa
gtgaagattgccatccatgacatcaatgataatgccccctggttccctgtgccacagata
cacctctctgtgcctgaaaattcacccatcaatacccggttagccattgagcatccagct
gtggacccggacatgggcaccaatggggtgcagacataccaacttcaacaagattatggg
gtttttacattggatgtggaggagaatgaaagtggagagagaacgccttatctgattgtc
atgggtgccctggacagggagaacaccgaccaatatgttactcttataattgcagaggat
ggtggaatcccaccactggtgggtagtgccaccctcaccattggtatcagtgacattaat
gacaactgtccccagttcaacgagactcagatcagcgtcaccatctttggaaactctagc
actgggttgcacatagcttcagtccatgctgtggatattgatcacggaatcaatgccgag
ataacctactcctacagccaaaaagtttcttttctgtcccgcaccctcttccgtcttaat
gaaagcacgggggtgattaacttgttcaagaggattaacggtgacacacctcttctgcat
cggctgagtgtgttggccaacggtccgggttgcatcccagcggtgataaccgtgttggtt
tccatcatcaaagtcaccatgagacctcctgaagtcattcctcgttttatagctaatgaa
gccgagggggtggtttacttgagggagttggaacccatccacacccccattgcttttttt
acgatcaaggaccccgacgaaaaatataaagtcgattgctatttggaagggggtggccct
ttccagttgactccttatcaaccctatcgcaatgagtatcttttggagactaccaagacc
ttggattatgagattcagcagttgtacgagatttcagtggtcgcgtggaatacagaggga
tttcatgtgaataaaatcatcaaagtgcagattctggatgataacgacaactctcccgtt
ttctctcaagccttggtagaattatcgatcgaggaaaacaatgcccccaatgcgtttctg
accaagctgcatgccacggatgctgacagtggagaaagaggccaagtgtcctacttcctt
gggcctgaggcgccttcctatttttccttagacaaagttacagggatccttactgtttct
acccagctggatagagaagaacgagagaaataccgctacaccgtcagagctgtggattct
ggcgtaccgccgcgagaatccattgccaccgtgaccctctctgtattggataaaaacgac
aacagcccgcgatttatcaacaaggatttcagtttcttcgtaccagagaatttcccaggc
ttcggtgaaattggagttataagcgtcaccgatgcagatatcgggcaaaatggatgggta
gccctttctgtagtcaacagaagtgatatttttgtgatcgacactggcaaaggtgtgttg
agagccaaggtctccctcgacagggaacagcagagctcctacatcttgtgggttgaagcg
gtggatgggggcgatccgcctttgtcctcgactgcaaaaatcaccatcctgttacttgac
ataaatgataacccccccttggttttgttcccccagtctaacatgtcttaccttctagtc
ctcccttccactttgccgggatctcccatcacagaagtctacgctatagacaacgacacc
ggcatgaacgcagttatcgcctacagcattatcgggagaagaggacctcggccagagtcc
ttcaagattgaccccaaaacaggcaacatcaccttggaagagtccctcatgcaaaacgat
tatggcctgtatcgccttctggtgaaggttagcgaccacggctatccagaacctttgcac
tctaccgtcatggtgaacctctttgtcaacgacaccgtgagcaatgagagctacatcgaa
agtctcctgaggaaagagtcagacatcaacatcgaggagaaggaaccccaaatttctata
gagcccacccacaggagggccgaggccatatcctgcatgcctactttggtaaccctctcc
ataataagcttgacttccatcagcctggtgacaggtatggggatttatatttgcctacgg
aaggggaaaaaataccacagaggggatgagggtttggaagtgcaaattccattaaatggg
agaattgacctgcatcgactggagaagaaacaggtggaaatttccaatatctga
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