Notechis scutatus (mainland tiger snake): 113415889
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Entry
113415889 CDS
T09026
Symbol
PCDH9
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
113415889 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nss01009
]
113415889 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nss04515
]
113415889 (PCDH9)
Protein phosphatases and associated proteins [BR:
nss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113415889 (PCDH9)
Cell adhesion molecules [BR:
nss04515
]
Cadherins
Protocadherins
113415889 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
V_ATPase_I
EphA2_TM
RCR
DUF6249
7tm_3
DUF6377
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
113415889
NCBI-ProteinID:
XP_026529269
Ensembl:
ENSNSUG00000010053
UniProt:
A0A6J1UNE0
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAVAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSS
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDRERLCAGAAYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVLQLHATDADVGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRALDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGILTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVITSNVSFDREQQSSYTFDVKAIDGGQPPCSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPIPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDNSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPEDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPISVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQVNEHFYWS
ISTAYKCPLNQY
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagagatttttacctgttggctgctctgatcgcctgcttgcggctggattct
gctgtcgctcaagaacttatttacaccatccgagaggaactgcctgaaaacgtgcccatt
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacaggaaccagctct
agtcttgtctacaggctggtctccaaagcaggagatgcccctttggtgaaagtctccagc
accacgggggaaatcttcaccacctccaaccggatcgaccgggagaggctctgtgctggg
gctgcttacgcagaagagaatgagtgcttcttcgaactggaggtggtgatccttcccaat
gactttttcaggctgatcaagatcaaaatcatcgtgaaggacaccaacgacaatgctccc
atgttcccgtcccctgtcatcaacatctccatccctgaaaacacgctgatcaacagccgc
ttccccatcccttccgccacagatcccgacactggtttcaacggagtccagcactacgaa
cttttgaatgggcaaagtgtctttgggttggatatcgtggaaactccggaaggggagaag
tggcctcagttgattgtgcagcaaaatctggaccgggagcagaaagacacctatgtgatg
aaaatcaaggtggaggatggaggaacgccccagaaatccagcacagccatccttcaggtc
acagtaagtgatgtcaatgacaacaggccagtgtttaaagagagccaggtggaagtccat
atccctgagaatgccccggtagggacctctgtcctccagcttcatgccacagatgcagat
gtgggaagcaatgcagaaatcagatatatttttggggcccaggttgctccggcaacgaaa
cgactctttgctttaaacaacaccactgggctaatcacggttcagagggccttagatcga
gaagagactgccatccacaaagtgacagtcctggccagtgatggtagctcaactcctgcc
cgggccactgttaccatcaatgtgactgatgttaatgataaccctcctaatatagacctc
aggtacatcataagccccatcaatggcacagtgtacttatctgagaaagatcctgtcaat
accaagattgcgctaattaccgtctcagataaggacacagatgtgaatggcaaagtcatt
tgtttcatcgaaagagaagtgccatttcacttgaaggccgtttatgacaaccagtacctg
ttagagacctcttccttgctggactatgagggcaccaaagaattcagctttaaaatagtg
gcctctgactcgggcaaacccagtttgaaccagaccgccctagtcagagtcaaactggag
gatgaaaacgacaaccctcccatctttagccagcctgtgattgagctgtctgtttctgaa
aacaaccggcggggtctctatttaaccacgatcagtgccaccgatgaggacagtggtaag
aatgcagacattgtatatcagcttggccccaacgcctcctttttcgatctggatcgtaag
acgggcattttgacagcttctcgggtgtttgaccgagaagaacaggagaggttcattttt
acagtcacggccagagacaatgggactcctcccttgcagagccaagcggctgtgattgtt
acggtgctagatgagaacgacaacagtcccaaattcacgcataaccattttcagtttttc
gtgtcggagaacttaccaaagtatagtactgtaggagtgatcacagtgacggacgcagat
gcaggtgagaacaaagctgtgactctctctatcttgaatgacaatgagaactttgttctg
gatccttactctggagttataacgtcaaacgtgtctttcgatcgcgagcaacaaagttcc
tacacctttgatgtcaaggctatcgatggaggacagccaccctgctcttcaactgctaag
gtcaccatcaatgtaatggatgtgaatgacaatagccctgtggtcatctatcccccttcc
aacacgtcttttaagctggtacctctctcagctatcccgggatcggtggtagcagaagtg
tttgctgttgacattgacacgggaatgaacgctgaactgaaatacacaatagtcagcgga
aacaacaaaggcttgttccgtattgatcctgtgacgggtaacatcaccctggaagagaaa
ccgattccaactgatgtaggcttgcatcggttggtggtcaacatcagcgatctgggctac
cctaaatccttgcacacccttgtccttgtgtttctgtatgtcaatgacactgcaggaaat
gcctcgtatatttatgacctgatccggaggactatggagacccctttggataggaatatt
ggggacaacagccagccctaccaaaacgaggactaccttaccatcatgatcgccatcgtg
gcaggggccatggtggtcattgtggtcatctttgtcaccgtgctggtccgttgtcgtcac
gcttccaggttcaaagctgcccagaggagcaagcaaggggccgagtggatgtctcccaac
caggagaacaagcagaacaagaagaagaagcggaagaaaaggaaatcccctaagagttcc
ctgttgaattttgtgaccattgaggagtccaaacccgaggatgctgttcacgaacctatc
aacgggaccattagccttccagctgagctggaggagcagagtataggaagatttgactgg
ggtactgcaccacccaccacctttaagcccaacagccctgatctcgccaagcattacaag
tctgcctctccccagtctgctttccaccttaagccggacactcccatctcggtgaaaaag
catcacgtgattcaggagctgcccttggacaacacctttgttggagggtgtgacaccctt
tccaaacgctcttccactagttcagaccacttcagtgcctcagagtgcagttcgcaagga
ggcttcaagacaaaaggccccttacacaccagacaggtaaatgagcacttttactggtct
ataagtactgcatacaagtgcccactcaaccagtattaa
DBGET
integrated database retrieval system
