Notechis scutatus (mainland tiger snake): 113416018
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Entry
113416018 CDS
T09026
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04510
Focal adhesion
nss04512
ECM-receptor interaction
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113416018 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113416018 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113416018 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nss00535
]
113416018 (COL9A2)
Proteoglycans [BR:
nss00535
]
Extracellular matrix (ECM) proteoglycans
Others
113416018 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
113416018
NCBI-ProteinID:
XP_026529450
UniProt:
A0A6J1UGI7
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All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MARLLNLCFLLQSFVFSLSQLQGPPGEPGPRGPPGPPGVPGADGIDGDKGPPGAAGIPGI
KGDPGLPGPDGAPGKPGIDGLTGAKGEPGRVGRPGPKGQLGLPGPPGLPGPGFPGTPGPP
GHIGLPGEMGPLGLKGEHGPDGPQGPPGPPGKPGPIGRIQGAEGSADFVCPTNCPPGLKG
PPGLQGLKGHRGRPGAPGEAGRQGRLGPRGDVGLSGEQGSQGSPGPEGPRGHPGMAGPKG
EMGPQGYKGMTGSIGAVGPRGEDGPRGPPGQVGEKGEIGPRGFSGAQGEMGPKGTWGLPG
IDGKPGFPGTPGVKGSVGQPGLPGPLGHRGVAGLPGTPGSKGGPGEKGERGTRGPSGLPG
PPGKIGEPGPAGAVGLQGIAGVKGDRGERGPTGPPGPQGKGGPKGDQGPPGIPGPQGLPG
VKGSKGFPGKIGSKGDIGDSGVEGLSGGKGQKGELGEPGPKGQQGTHGEPGFPGPPGDIG
APGVRGFQGPPGPRGLNGERGVPGMPGLRGGPGRDTGDQHIVEVVVKMLQEQLAELAVSA
KRETLGGSGMMGPPGPPGPPGPPGSQGPHGHPGSRGLPGILGAVGQIGNTGPKGKRGEKG
DQGEAGRGHQGMPGPLGIPGPPGQPGQALNGKHGERGVPGTPGEAGRPGLPGPSGLPGFC
EAVVCLGASASAQLTEVGSVKGPSY
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggctagattgctgaatctctgcttccttctccaaagctttgtcttctccttaagccag
ttgcaaggtccgccaggagaacctgggccacggggccccccaggtccgcccggtgtgcca
ggagcagacggcattgatggcgataaaggtccccccggtgcggcaggcattcctgggatc
aaaggagatccaggcctgccaggaccagatggagctccaggaaaacccggaatagatggc
cttacgggagctaaaggagagccaggccgtgttggaagaccaggtcccaaaggccagttg
ggacttccaggaccaccggggctcccaggacccggatttccagggactcctggcccccca
ggtcacattggacttcctggagaaatgggaccattgggacttaagggggaacatggacca
gatggaccacaaggacctccaggaccacctggaaagccaggcccaattggtcgtatccaa
ggagccgagggcagtgctgatttcgtgtgtccaaccaactgcccacctggactgaaggga
cctccaggtttacaggggttgaagggacacagaggccgtccaggagcccctggagaggct
ggaagacaaggccggctgggtccaagaggtgatgtgggcctgtctggagaacaaggcagt
cagggttctcctggcccagaaggtcccagggggcatccaggaatggcaggaccaaaaggg
gagatgggtcctcaaggttacaaaggcatgactgggagtattggagctgttggtccccgg
ggtgaagatggccccaggggtcccccaggacaagttggagagaagggagaaattggtcct
cgtggtttcagtggtgctcagggtgaaatgggccccaaaggaacatgggggcttcctggg
attgatggcaaacctggatttcctgggactccgggggtgaagggaagtgtgggtcaacca
ggccttccagggcccctgggacacagaggagtggctggtttgccaggcactcctgggagc
aaaggtggtcctggcgaaaagggagaacgagggacacgtggtccatcaggtttacctggg
ccacctggaaaaattggagagcccggtccagcaggagcagtgggtcttcaaggcatcgct
ggtgtgaaaggagatcggggtgagagggggcctacgggacctccaggtccacagggaaaa
gggggccctaaaggagaccaggggccccctggaattccagggccacaaggactcccagga
gttaaaggcagcaagggcttcccgggaaaaattggatccaaaggcgatatcggggattct
ggtgttgaaggcctttctggaggaaaggggcagaagggtgaactgggggaacctggacca
aagggacagcaaggcacccatggggaacctggctttcctggacctcctggagacattgga
gcacctggagtcagaggctttcaaggacctcctggcccccgagggctgaatggggaacgt
ggtgtacctgggatgcctgggttgcgaggtggcccaggcagggacaccggagatcagcat
attgttgaagtcgtggtcaagatgctgcaagaacaactggctgagttagctgtgagtgcg
aaaagagaaactttgggtggaagcggcatgatgggaccacctggccctccagggccccct
ggaccacctggctcccaaggcccccatggacatcctggttcccgtggtcttccaggaatc
ctaggagctgttggacagataggcaacactggacccaaaggaaaaaggggtgagaaagga
gaccaaggagaagctggccgtggacatcaagggatgccagggcctctaggcataccaggt
ccccctggtcagcctggtcaagctctcaatggcaaacatggagagcgaggtgttccaggt
actccaggagaagcaggacgtcctggtttacctgggccttctggccttcctggattttgc
gaggcagttgtctgccttggggcctctgcctcagctcagctaactgaagtaggttctgtc
aaaggaccttcatactga
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