Notechis scutatus (mainland tiger snake): 113416062
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Entry
113416062 CDS
T09026
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113416062 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113416062 (EXOSC1)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113416062 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
113416062 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
113416062
NCBI-ProteinID:
XP_026529556
Ensembl:
ENSNSUG00000007224
UniProt:
A0A6J1UF31
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MVPARYCVPGERLCSLEEGTPGNGTYTRHGSIFASLAGCFMKKSENGMLPVISVMRDVES
QLLPDVGATVTCKVCSINSRFAKVHILYVGSTPLKSPFRGTIRREDIRATEKDKIEVYKS
FRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAGLQMVPISWCEMQCPSTHGKE
LRKVARVQPQFLQT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggttcctgcgcgctactgtgttcctggagagcgactctgcagtttagaggaaggaacc
cctgggaatggtacctacacacgccatggttctatctttgcctctttggctggttgtttc
atgaagaaaagtgagaatggcatgctcccggtaatctctgtgatgagagatgtagaatct
cagctactgcctgatgtgggagccacagtgacctgcaaggtttgcagtattaattctcgt
tttgccaaggtgcatattttgtatgttggttctacaccattaaaatccccattccgtgga
acaatacgcagagaagacatccgagctacagaaaaagacaagatagaggtttacaagagt
ttccgcccaggggatattgttttggccaaagttatctctttaggggatgcacaatcaaat
tatttgctgaccacagcagaaaatgagctgggggtagtggtggctcatagtgaagcaggt
ttacagatggtgccaatcagctggtgtgaaatgcagtgtcccagtacacatgggaaggag
ctgcgcaaagtagcccgagttcagcctcaatttctgcagacatag
DBGET
integrated database retrieval system
