Notechis scutatus (mainland tiger snake): 113416479
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Entry
113416479 CDS
T09026
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1-like
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04622
RIG-I-like receptor signaling pathway
nss05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
113416479
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113416479
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nss04054
]
113416479
Enzymes [BR:
nss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113416479
Pattern recognition receptors [BR:
nss04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
113416479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
DEAD
Helicase_C
ResIII
CARD_2
DUF3638
Cas3-like_C_2
CGGC
Motif
Other DBs
NCBI-GeneID:
113416479
NCBI-ProteinID:
XP_026530147
Ensembl:
ENSNSUG00000020489
UniProt:
A0A6J1UGW0
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MEAAASPSPAGGYSSTSTTTTTTTMEAAASPSRDECILYLISCFRTRIKNNVRVHQVLDL
MPSLSLDQKRQLHAVAAEKGDVEAAEKLLSLVEKGAPDSPGLCQEFCEALVKGGYAAADY
LDPSLNELPSPSLEAAGDLGKALVNLFFDHLTDTLQATQVALRCLGKGLLNLEDVERVSR
NRLKLSFHVPASQKLMRRLRTIWTKPHAIWTRVQPWEEDWHSQQLLPERARMGTSNQQRQ
NEDSENQLWVERLAEPVSEGQPKHHRLEPDVSLQETNACDVNANFGQMNLYSDDSDHVES
RDQRPSSEQELSLRDYQMEVAKPALEGKNIIICLPTGTGKTRVAVYIAKDHLDKKRKAKE
CGKVIVLVNKVPLVEQHLENEFGPYLKHSYRTIGLSGASQLKFSFPELIRDYDVIICTAK
ILENALEKVYEDDEERVQLSVFSLMIIDECHHTQKEAVYNNIMRYYLKEKRGNEKRKKEG
KQLVAQPQILGLTASPGVGGATTHSKAEEHILTICANLDADEIVTVQEHSAQLQHQAKEP
LKKFEITDDKKEDPFREKLVNIMTEIQGYGQFSPNVDFGSQAYEQWVIQEEKKAAKEGTR
KERVCAEHLKKYNDALLINDTTRMIDAYNHLKNFYEEERNRKMVKDEDREDGVTASQLDE
TDTCLIELFYDKQRELEELAQKLQYENEKLTKLRTTLMQQFTKNNEPRGIIFSKTRQSAF
AIYRWINDNPKFEEVGVKAHYLIGTGHNSEFQHMTQNEQKDIIQKFRTGKINLLIATTVA
EEGLDISQCNIVIRYGLVTNEIAMIQARGRARAEESIYVLVASDGSGAAERENVNMFREK
MMHRAIKRVQNMPHENYLHKIKELQLQSCMEMKMKAKKEQFKQYKENPSLIMFHCKNCKD
PKCSGDDIQVILNMHHVNVKKEFADLYIVRENKTLRAKEADYQTNGDIICRKCGQIWGTM
MVYKGLDLPCLKIKNFVLHFKDKKCTSKKIYKKWSELAINFPAFNYADHYIFSED
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggccgccagtccatcccccgccggcggctacagcagcaccagcaccaccacc
accaccaccaccatggaagcggccgccagcccatcccgggacgagtgcatcctctacttg
atctcttgctttaggaccaggatcaagaacaacgtccgagtgcatcaagtgctggatttg
atgccgtccctcagcctcgaccaaaaacgtcagctccacgccgtggctgcagaaaaaggg
gacgtggaagccgcggagaagctgctctccctggtggagaagggggctcccgactcgccg
ggcttatgccaggagttctgcgaggcgctggtgaagggaggctacgccgccgccgattac
ctggatcccagcctgaatgaactgccctcgccttctttggaagcggccggcgacctgggc
aaggctctggtgaacctgttcttcgatcacctcaccgacacgctacaggccactcaggtg
gctctccggtgtttgggaaaggggctgttaaatctcgaagatgtggagcgggtaagccgg
aacagactaaaactgtcttttcatgtgcctgccagccaaaaactcatgagaaggctgcgc
acaatttggacaaagccacatgcaatttggacaagggtacaaccttgggaagaagattgg
cacagccagcagctacttcctgaacgggccaggatggggacatctaatcagcagcggcag
aacgaagacagtgaaaatcagttgtgggtagaaaggctagcagagccagtgagtgaagga
cagccaaagcatcatagattggaacctgatgtcagtttgcaagaaacaaatgcctgtgat
gtgaatgcaaactttggacagatgaacctttacagtgatgattcagatcatgttgaaagt
agagatcaaagaccttcctctgaacaagagctgagtctgagagactatcagatggaagtg
gccaaaccagctttggaagggaaaaatattattatatgccttcccacaggcactggcaag
actcgagttgctgtttacattgccaaagaccacttagataaaaaaagaaaagcaaaagag
tgtggaaaggttatagttcttgtcaacaaggtgccattggtggaacagcatttagaaaat
gaatttggtccctatttgaagcattcgtaccgaacaataggactaagtggggcgtctcag
ctgaaattttcattccctgaactaattagagattatgatgtgattatttgtacagctaag
atcctggagaatgcattggagaaagtttatgaagatgatgaagaaagagtccagttatca
gtgttctccttgatgatcattgacgaatgccatcatacccagaaagaagctgtctataac
aatataatgcgttactacttaaaagaaaaaaggggaaatgagaagcgaaagaaagaagga
aaacaactggtggctcagcctcagattctggggctgacagcctcacccggagtgggaggt
gcaacgactcattcaaaagcagaggaacatattctaacaatatgtgccaacctggatgca
gatgagattgtgactgttcaagagcacagcgcgcaactgcaacatcaagcaaaagagcct
cttaagaaatttgagattacagacgacaaaaaggaggatccatttagagagaaactcgta
aacattatgactgagattcaaggctatggccaattcagtccaaacgttgattttggatca
caggcctatgaacagtgggtaattcaggaggaaaagaaagctgccaaggaaggaactcgc
aaagaacgggtatgtgcagaacacttgaagaaatacaacgatgccttgctgattaatgat
actacccgaatgattgatgcctataaccatctgaagaacttttatgaggaagaaaggaac
agaaagatggtaaaggatgaagatagggaagatggagtcacagcctcacaactagatgag
actgatacatgtcttatagagttgttttatgacaaacaaagagagctggaagagttagca
caaaaactacaatatgaaaatgaaaaactaacgaagttgcgcacaactttaatgcaacaa
ttcacaaagaacaatgaacccagaggaattattttctcgaaaactcgtcaaagtgcattt
gctatctatcggtggattaatgataatcccaaatttgaagaagttggagtgaaggctcac
tacctcattggtacaggacataatagtgaatttcagcatatgactcagaatgaacaaaaa
gatatcattcaaaagttccgtactggcaaaatcaacctactaattgctactaccgtagca
gaggaaggcctggatatctcacagtgcaacattgttatacgctacggtcttgttaccaat
gaaatagcgatgattcaggctcggggaagagctcgagctgaggaaagcatctatgtgctt
gtagcttcagatggatcgggagctgctgaacgtgaaaatgttaatatgtttcgtgagaaa
atgatgcaccgagcaattaagcgtgtccaaaacatgccacatgaaaattatttgcataag
atcaaagagcttcagctgcaaagctgcatggaaatgaaaatgaaggcaaagaaagaacaa
tttaaacagtacaaggagaacccctccctgatcatgttccactgcaaaaactgcaaggat
ccaaaatgctcaggagacgacattcaagttattttaaatatgcatcatgtcaacgttaaa
aaggaatttgcagacctttatatcgtaagggaaaataagacactgcgagcaaaagaagca
gattatcaaacaaatggggacattatctgtaggaaatgtggccagatttggggaactatg
atggtatacaaaggtctagatcttccttgcttaaaaataaaaaatttcgttttgcatttc
aaagataagaaatgcacctcaaagaaaatttacaaaaaatggagtgaactagccattaat
tttccagctttcaattatgcagatcattatatttttagtgaagattaa
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