Notechis scutatus (mainland tiger snake): 113416617
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Entry
113416617 CDS
T09026
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04382
Cornified envelope formation
nss04510
Focal adhesion
nss04512
ECM-receptor interaction
nss04518
Integrin signaling
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113416617 (COL4A6)
04518 Integrin signaling
113416617 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113416617 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113416617 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113416617 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nss04147
]
113416617 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
nss00536
]
113416617 (COL4A6)
Exosome [BR:
nss04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113416617 (COL4A6)
Glycosaminoglycan binding proteins [BR:
nss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113416617 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113416617
NCBI-ProteinID:
XP_026530415
UniProt:
A0A6J1UJB0
LinkDB
All DBs
Position
Unknown
AA seq
1692 aa
AA seq
DB search
MFAGAPLLLVALSLAARPVYGGGKKFYHGLCGGRDCTAGCKCFPEKGARGQPGPIGNQGS
MGIEGFTGPEGVRGLKGERGITGPPGAAGMKGDKGPVGVPGFPGIYGVPGHPGQPGPRGL
PGLDGCNGTIGSPGTSGSDGFPGPQGPPGRPGPKGPKGEPVYAPGIFKGVKGERGLPGLD
GAFGPKGFPGQPGPAGPIGLPGFPGPPGFPGLPGPMGSTGLIFHGETGEKGDVGLPGPAG
PPPSTGTEEFVGLTKGQQGAKGVPGVKGIPGPPGGPGFPGFWSFGEKGEKGVPGLPGPRG
DMGLRGPDGNIGRKGVLGKAGFPGWDGSPGGKGEFGDVGPPGPSIIVDRNGAVISGPPGD
PGTPGTPGPRGDEGSIGLIGFPGQPGRPPTFPGLPGSVGVPGILGFKGDRGDPGKTTVGS
PGLPGKDGDPGLSGAPGLPGVSETIHTAGAVFSGEPGVPGIPGPRGPPGIFGLRGYKGEG
GDCACDGGITRIGLPGESGSPGQPGRQGDIGPKGSLGEPGSGLLGPPGPPGFQGQSGLPG
LKGQKGEPSSDSGRGPRGDPGNAGLRGPSGKPGTPGRDGTQGAPGPRGLAGDDGFGFPGD
KGFPGLPGSRGKQGEIGLPGIGFPGPNGRFGLTGDPGISGIPGQPGPPGPPGETLPCIIP
GTIGPPGLPGPPGFPGSKGSKGFSGFQGQPGLNGLKGEPGIPGLARFPGMPGFPGPPGDP
GSKGRQGVDGADGLPGPEGCPGLVGPNGSPGDVFGAEPGSQGEPGLPGLPGDKGFPGDFG
FPGTPGLDGRPGLSGRKGGRGEPGLPGFDGLQGPPGAGGPFGIKGKPGPLGTTGLPGSQG
CQGPPGTKGPRGDAGSPGPAGMKGFPGLDGLPGRPGEQGLPGPPGLWGPKGTSGFQGSKG
EKGSVGVVGFPGMPGPPGRSGVDGLKGTFGAQGRNGNPGFSGFPGSKGDRGVRGPPGPPI
FRPPGLGLKLKGNRGDPGLVGQRGFPGPRGERGAPGVRGQPGLPGRAGSPAREKGPPGDP
GFPGTFGSPGLLGQKGSGGISGFPGMPGRSGAEGIPGSSGSPGITGLRGPKGDRGESRGI
PGGVGPKGQRGDRGFQGIAGIQGTSGDPGYPGGLGPNGQKGSPGYPGQEGPQGFPGSGGL
RGNPGFPGNPGQRGAPGFPGSPGTVGPKGYPGFPGLSGLNGLPGTKGSPGKQGLSENGLP
GSAGIPGVKGQRGDPGFQGGAPGFRGSKGPTGEMGLPGSPGVPGVRGPPGISVPSRIPGK
PGDAGRPGGDGLPGFKGPRGPPGPPGPAFNQGDRGNPGRTGPPGFSGLKGDAGIPGLNGI
PGASGFKGFRGDAGFMGMPGKDGLPGDPGFPGPKGKAGPPGSPGLQGATGVTQPPEEIRV
PPGLIGLPGNNGNPGLNGDPGFQGQTGPQGPKGKAGIPGQMGFNGLPGPPGVVGDPGSPG
TPGLPGFEGRPGNPGLAGLPGMPGRSIGVGYTLVKHSQSEQIPPCPVGMNKLWEGYSLLY
VEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNIDEVCYYASRNDKSYWLSTTAPIPMMPVS
SYQIAQYISRCSVCEAPSQAVAVHSQDITIPQCPEGWRSLWIGYSFLMHTAPEGGGQSLV
SPGSCLEDFRATPFIECNGARGTCHYFSNKYSFWLTTVEVNHQFAESPVSETLKAGQLRT
RVGRCQVCMKNL
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccggcgcgcccctgttgctggttgccctgagcctggcagcgcgtcccgtctat
gggggtgggaagaaattttaccatggactctgtgggggtcgcgattgtacagccggctgc
aagtgcttccccgagaaaggtgctcggggtcaaccagggccaatcgggaaccaaggatca
atgggcattgaaggctttactggaccagagggagtgagaggactgaaaggagagagaggt
ataacaggacctccaggtgcagctggaatgaagggagacaagggcccagtgggtgttcct
ggattccctggaatttatggagttccaggacaccctggtcagccaggacccagaggtctt
cctggtttagatggctgtaatggtaccattggaagtcctggtacctctggatcagatgga
ttccctggtccccaaggaccaccgggtcgtcctggtcctaaaggccccaaaggtgaacct
gtctatgccccgggaatttttaaaggagtgaagggagaaagaggtcttcctggcctggat
ggtgcttttggaccgaaaggttttccaggtcaaccagggcctgctggtcccatcgggcta
cctggatttccgggacctccaggtttcccaggactcccaggacctatgggcagtaccggt
ttaattttccatggagaaacaggagaaaaaggagatgttgggctgccaggaccagcggga
cctccaccttccacggggacagaagaatttgttgggttgaccaaaggacagcaaggagca
aagggagttcctggtgtcaaaggaatcccaggcccaccaggaggtcctggattcccgggt
ttctggagcttcggagaaaagggagaaaaaggcgtccccggtttaccaggaccaagggga
gacatgggactgagaggacctgatggaaacataggcagaaagggagttctgggcaaagca
ggatttcctggttgggatggttctccaggtggaaagggtgaatttggcgatgtgggtcca
ccaggcccttcaataattgttgacagaaatggtgctgtcatatcaggtccccctggagac
cccggcacaccaggaacccctggccctagaggagatgaggggagtattggtttgatagga
tttcctgggcaaccaggacgtcctccaacctttccaggtctcccaggttcagtaggagtc
ccagggatcctaggatttaaaggtgaccgaggagacccaggaaagactacagttggatct
ccaggcctacctgggaaagatggtgatccagggttatccggagctccagggttaccaggt
gtttcagaaacaatacacacagcaggcgcagtctttagtggtgaacctggggtaccaggt
atccctggaccaaggggacccccaggaatctttggcttaagagggtataaaggggaaggt
ggtgattgtgcctgtgatggaggaatcacaagaattggcttgccaggggagtcaggcagc
cctggccaacctggcagacaaggtgatattgggccaaaaggatccttgggagagccagga
agtggtttactaggtccccctggaccaccaggtttccaaggtcaatctggtcttccaggc
cttaaaggacaaaagggggaaccgtcttcagactcaggcagaggacctcgaggagatcca
gggaatgctggactcaggggtccttcggggaaacctggaactcctggcagggatggcacg
caaggtgccccaggtccacgtggccttgcgggtgatgatggctttggcttcccaggggac
aaaggtttccctggattacctggctcaagggggaagcagggtgagattggcctacctggc
attggttttccggggccaaatggacgttttggacttacgggggatccagggatcagtggc
atcccaggacaacctggacctccagggccaccaggagaaactttgccctgcataatccct
ggaaccattggtccacctgggcttcctggacctccagggtttccaggttccaagggtagc
aaaggattttctggtttccaagggcagccaggtttaaatggcttaaaaggagaaccgggc
atacccgggttggctcgattcccaggaatgccggggtttcctggccctcctggagatccg
ggttcaaaagggcgacaaggagttgacggggcggatggactgcctggtccagaaggctgt
cctggtttggttggcccaaatggatcccccggtgatgtctttggggctgaaccagggtcc
caaggagaacctggcttacctggcttacccggagataaaggctttcctggagattttggc
tttcctggaacaccaggtttggatggaaggcctggcctatcgggtagaaaaggaggacgt
ggggagccgggtcttccaggttttgatggactgcaaggaccaccaggagcaggaggtcca
tttggcatcaaaggaaaaccaggtcccttgggaacaaccggccttccaggatcacaaggc
tgccaaggacctcccggaaccaaagggccaagaggagatgctggttcaccaggtcctgcc
ggcatgaaagggttcccagggcttgatggcctgccaggacggcctggagaacaagggttg
cctggacctccaggtctctggggcccaaaaggaacttcaggttttcaaggctcaaaaggg
gaaaagggttccgtgggcgtggtcggttttcctgggatgccggggccacctgggcgctct
ggcgtggatggcctgaagggaacttttggtgcacaaggaagaaacggaaaccccggattc
tctggcttccctggctccaaaggggacagaggtgtccgtggccctcctggacctcccatt
ttcagacccccaggcctgggcctcaaactcaaagggaacagaggagatcctggattggtg
ggacagagaggatttccagggccaagaggggaaagaggagcccccggtgtccgggggcag
cctgggcttccagggagagctggatcaccagctagagagaaaggaccgccaggagaccca
ggttttccaggaacgtttggttctcccgggctgttgggacaaaagggatctggtggcatc
tcagggtttcctggaatgcctgggagaagtggtgcggaaggtatacctggctcctctggc
tccccaggaattaccggattgcgtggtccaaaaggtgaccgaggggaatcccgaggaatt
ccaggtggtgtgggacctaagggccaacgaggggaccgagggtttcaaggtatagcaggt
atccaaggaacaagcggtgacccaggatatccaggaggtcttggaccaaatgggcagaag
ggttcaccaggttaccctggacaagaagggccacaaggctttcctggatctggtggtttg
aggggcaacccaggttttccaggtaatcctgggcaacgtggggctccaggatttccagga
tctcctggcaccgtaggaccaaaaggatacccaggattcccaggactgagcggtctaaat
ggcttaccgggcaccaaaggctctcccggaaaacaaggcctgagtgaaaatggactgcct
ggatcagcaggaattccaggtgtcaaaggtcaacgaggtgacccaggtttccagggtgga
gctcctggctttcgtggatcaaaaggacctacaggagaaatgggtcttcctggaagccca
ggtgtccctggtgtgcgaggcccccctggcatctctgtgccttcaaggattcctgggaag
cctggtgatgcgggacgtcctggaggagatgggctgccaggcttcaaaggacctcgtgga
ccaccaggaccaccaggaccagccttcaatcaaggtgatcgaggtaatccaggccgcact
ggtcctccgggcttctcaggcctcaaaggcgatgcaggcatccctggacttaacggaatc
cctggcgcatcaggtttcaaaggattcagaggggatgcaggtttcatgggaatgcctggg
aaagatggactgccaggtgatccaggtttccctgggccaaaaggcaaagcaggccctcca
ggttctcctgggctgcaaggagctacaggcgtaacccaaccaccagaagagatcagagtt
cctcctggcttaataggattgcctggaaataatggcaaccctggtttaaatggagaccct
ggcttccaggggcaaactggaccacaaggtccaaaaggaaaagcaggcatacctggccag
atgggatttaatggcttaccaggtccacctggtgtggtaggagacccaggttccccagga
actccagggctaccagggtttgaaggacgtcctgggaatccaggcctggctggattgccc
gggatgccaggtcgtagcattggggttggctataccttggtgaaacatagccagtcggag
cagatcccaccctgtccggtgggcatgaacaaactctgggaaggctacagtttgctgtat
gtggagggccaggagaagtcccacaatcaagacctgggtttcgctggctcctgcctgcct
cgcttcagcaccatgccttttatttattgcaacattgacgaagtgtgctactacgccagc
cgcaatgataaatcgtactggctttccaccaccgctccgatacccatgatgcccgtcagc
agctaccaaatcgcccagtacatcagtcgctgctcggtgtgcgaagcaccatcccaagct
gtggctgtgcacagccaggacatcaccattccacaatgtcccgaaggctggcggagtctc
tggattggctactccttcctcatgcacacggctcccgaaggcggtggccagtccctggtc
tctcccggatcctgcctagaggacttccgcgccacgcctttcattgagtgcaacggtgcc
cggggaacgtgccattacttttccaacaagtacagcttttggctgaccacggtggaggtg
aaccatcagtttgctgagtctcccgtctccgaaacgctgaaggcgggtcagctccggaca
cgggtgggacggtgccaagtctgcatgaaaaatttgtag
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integrated database retrieval system
