Notechis scutatus (mainland tiger snake): 113416617
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Entry
113416617 CDS
T09026
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04510
Focal adhesion
nss04512
ECM-receptor interaction
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113416617 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113416617 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113416617 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nss04147
]
113416617 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
nss00536
]
113416617 (COL4A6)
Exosome [BR:
nss04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113416617 (COL4A6)
Glycosaminoglycan binding proteins [BR:
nss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113416617 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113416617
NCBI-ProteinID:
XP_026530415
UniProt:
A0A6J1UJB0
LinkDB
All DBs
Position
Unknown
AA seq
1692 aa
AA seq
DB search
MFAGAPLLLVALSLAARPVYGGGKKFYHGLCGGRDCTAGCKCFPEKGARGQPGPIGNQGS
MGIEGFTGPEGVRGLKGERGITGPPGAAGMKGDKGPVGVPGFPGIYGVPGHPGQPGPRGL
PGLDGCNGTIGSPGTSGSDGFPGPQGPPGRPGPKGPKGEPVYAPGIFKGVKGERGLPGLD
GAFGPKGFPGQPGPAGPIGLPGFPGPPGFPGLPGPMGSTGLIFHGETGEKGDVGLPGPAG
PPPSTGTEEFVGLTKGQQGAKGVPGVKGIPGPPGGPGFPGFWSFGEKGEKGVPGLPGPRG
DMGLRGPDGNIGRKGVLGKAGFPGWDGSPGGKGEFGDVGPPGPSIIVDRNGAVISGPPGD
PGTPGTPGPRGDEGSIGLIGFPGQPGRPPTFPGLPGSVGVPGILGFKGDRGDPGKTTVGS
PGLPGKDGDPGLSGAPGLPGVSETIHTAGAVFSGEPGVPGIPGPRGPPGIFGLRGYKGEG
GDCACDGGITRIGLPGESGSPGQPGRQGDIGPKGSLGEPGSGLLGPPGPPGFQGQSGLPG
LKGQKGEPSSDSGRGPRGDPGNAGLRGPSGKPGTPGRDGTQGAPGPRGLAGDDGFGFPGD
KGFPGLPGSRGKQGEIGLPGIGFPGPNGRFGLTGDPGISGIPGQPGPPGPPGETLPCIIP
GTIGPPGLPGPPGFPGSKGSKGFSGFQGQPGLNGLKGEPGIPGLARFPGMPGFPGPPGDP
GSKGRQGVDGADGLPGPEGCPGLVGPNGSPGDVFGAEPGSQGEPGLPGLPGDKGFPGDFG
FPGTPGLDGRPGLSGRKGGRGEPGLPGFDGLQGPPGAGGPFGIKGKPGPLGTTGLPGSQG
CQGPPGTKGPRGDAGSPGPAGMKGFPGLDGLPGRPGEQGLPGPPGLWGPKGTSGFQGSKG
EKGSVGVVGFPGMPGPPGRSGVDGLKGTFGAQGRNGNPGFSGFPGSKGDRGVRGPPGPPI
FRPPGLGLKLKGNRGDPGLVGQRGFPGPRGERGAPGVRGQPGLPGRAGSPAREKGPPGDP
GFPGTFGSPGLLGQKGSGGISGFPGMPGRSGAEGIPGSSGSPGITGLRGPKGDRGESRGI
PGGVGPKGQRGDRGFQGIAGIQGTSGDPGYPGGLGPNGQKGSPGYPGQEGPQGFPGSGGL
RGNPGFPGNPGQRGAPGFPGSPGTVGPKGYPGFPGLSGLNGLPGTKGSPGKQGLSENGLP
GSAGIPGVKGQRGDPGFQGGAPGFRGSKGPTGEMGLPGSPGVPGVRGPPGISVPSRIPGK
PGDAGRPGGDGLPGFKGPRGPPGPPGPAFNQGDRGNPGRTGPPGFSGLKGDAGIPGLNGI
PGASGFKGFRGDAGFMGMPGKDGLPGDPGFPGPKGKAGPPGSPGLQGATGVTQPPEEIRV
PPGLIGLPGNNGNPGLNGDPGFQGQTGPQGPKGKAGIPGQMGFNGLPGPPGVVGDPGSPG
TPGLPGFEGRPGNPGLAGLPGMPGRSIGVGYTLVKHSQSEQIPPCPVGMNKLWEGYSLLY
VEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNIDEVCYYASRNDKSYWLSTTAPIPMMPVS
SYQIAQYISRCSVCEAPSQAVAVHSQDITIPQCPEGWRSLWIGYSFLMHTAPEGGGQSLV
SPGSCLEDFRATPFIECNGARGTCHYFSNKYSFWLTTVEVNHQFAESPVSETLKAGQLRT
RVGRCQVCMKNL
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccggcgcgcccctgttgctggttgccctgagcctggcagcgcgtcccgtctat
gggggtgggaagaaattttaccatggactctgtgggggtcgcgattgtacagccggctgc
aagtgcttccccgagaaaggtgctcggggtcaaccagggccaatcgggaaccaaggatca
atgggcattgaaggctttactggaccagagggagtgagaggactgaaaggagagagaggt
ataacaggacctccaggtgcagctggaatgaagggagacaagggcccagtgggtgttcct
ggattccctggaatttatggagttccaggacaccctggtcagccaggacccagaggtctt
cctggtttagatggctgtaatggtaccattggaagtcctggtacctctggatcagatgga
ttccctggtccccaaggaccaccgggtcgtcctggtcctaaaggccccaaaggtgaacct
gtctatgccccgggaatttttaaaggagtgaagggagaaagaggtcttcctggcctggat
ggtgcttttggaccgaaaggttttccaggtcaaccagggcctgctggtcccatcgggcta
cctggatttccgggacctccaggtttcccaggactcccaggacctatgggcagtaccggt
ttaattttccatggagaaacaggagaaaaaggagatgttgggctgccaggaccagcggga
cctccaccttccacggggacagaagaatttgttgggttgaccaaaggacagcaaggagca
aagggagttcctggtgtcaaaggaatcccaggcccaccaggaggtcctggattcccgggt
ttctggagcttcggagaaaagggagaaaaaggcgtccccggtttaccaggaccaagggga
gacatgggactgagaggacctgatggaaacataggcagaaagggagttctgggcaaagca
ggatttcctggttgggatggttctccaggtggaaagggtgaatttggcgatgtgggtcca
ccaggcccttcaataattgttgacagaaatggtgctgtcatatcaggtccccctggagac
cccggcacaccaggaacccctggccctagaggagatgaggggagtattggtttgatagga
tttcctgggcaaccaggacgtcctccaacctttccaggtctcccaggttcagtaggagtc
ccagggatcctaggatttaaaggtgaccgaggagacccaggaaagactacagttggatct
ccaggcctacctgggaaagatggtgatccagggttatccggagctccagggttaccaggt
gtttcagaaacaatacacacagcaggcgcagtctttagtggtgaacctggggtaccaggt
atccctggaccaaggggacccccaggaatctttggcttaagagggtataaaggggaaggt
ggtgattgtgcctgtgatggaggaatcacaagaattggcttgccaggggagtcaggcagc
cctggccaacctggcagacaaggtgatattgggccaaaaggatccttgggagagccagga
agtggtttactaggtccccctggaccaccaggtttccaaggtcaatctggtcttccaggc
cttaaaggacaaaagggggaaccgtcttcagactcaggcagaggacctcgaggagatcca
gggaatgctggactcaggggtccttcggggaaacctggaactcctggcagggatggcacg
caaggtgccccaggtccacgtggccttgcgggtgatgatggctttggcttcccaggggac
aaaggtttccctggattacctggctcaagggggaagcagggtgagattggcctacctggc
attggttttccggggccaaatggacgttttggacttacgggggatccagggatcagtggc
atcccaggacaacctggacctccagggccaccaggagaaactttgccctgcataatccct
ggaaccattggtccacctgggcttcctggacctccagggtttccaggttccaagggtagc
aaaggattttctggtttccaagggcagccaggtttaaatggcttaaaaggagaaccgggc
atacccgggttggctcgattcccaggaatgccggggtttcctggccctcctggagatccg
ggttcaaaagggcgacaaggagttgacggggcggatggactgcctggtccagaaggctgt
cctggtttggttggcccaaatggatcccccggtgatgtctttggggctgaaccagggtcc
caaggagaacctggcttacctggcttacccggagataaaggctttcctggagattttggc
tttcctggaacaccaggtttggatggaaggcctggcctatcgggtagaaaaggaggacgt
ggggagccgggtcttccaggttttgatggactgcaaggaccaccaggagcaggaggtcca
tttggcatcaaaggaaaaccaggtcccttgggaacaaccggccttccaggatcacaaggc
tgccaaggacctcccggaaccaaagggccaagaggagatgctggttcaccaggtcctgcc
ggcatgaaagggttcccagggcttgatggcctgccaggacggcctggagaacaagggttg
cctggacctccaggtctctggggcccaaaaggaacttcaggttttcaaggctcaaaaggg
gaaaagggttccgtgggcgtggtcggttttcctgggatgccggggccacctgggcgctct
ggcgtggatggcctgaagggaacttttggtgcacaaggaagaaacggaaaccccggattc
tctggcttccctggctccaaaggggacagaggtgtccgtggccctcctggacctcccatt
ttcagacccccaggcctgggcctcaaactcaaagggaacagaggagatcctggattggtg
ggacagagaggatttccagggccaagaggggaaagaggagcccccggtgtccgggggcag
cctgggcttccagggagagctggatcaccagctagagagaaaggaccgccaggagaccca
ggttttccaggaacgtttggttctcccgggctgttgggacaaaagggatctggtggcatc
tcagggtttcctggaatgcctgggagaagtggtgcggaaggtatacctggctcctctggc
tccccaggaattaccggattgcgtggtccaaaaggtgaccgaggggaatcccgaggaatt
ccaggtggtgtgggacctaagggccaacgaggggaccgagggtttcaaggtatagcaggt
atccaaggaacaagcggtgacccaggatatccaggaggtcttggaccaaatgggcagaag
ggttcaccaggttaccctggacaagaagggccacaaggctttcctggatctggtggtttg
aggggcaacccaggttttccaggtaatcctgggcaacgtggggctccaggatttccagga
tctcctggcaccgtaggaccaaaaggatacccaggattcccaggactgagcggtctaaat
ggcttaccgggcaccaaaggctctcccggaaaacaaggcctgagtgaaaatggactgcct
ggatcagcaggaattccaggtgtcaaaggtcaacgaggtgacccaggtttccagggtgga
gctcctggctttcgtggatcaaaaggacctacaggagaaatgggtcttcctggaagccca
ggtgtccctggtgtgcgaggcccccctggcatctctgtgccttcaaggattcctgggaag
cctggtgatgcgggacgtcctggaggagatgggctgccaggcttcaaaggacctcgtgga
ccaccaggaccaccaggaccagccttcaatcaaggtgatcgaggtaatccaggccgcact
ggtcctccgggcttctcaggcctcaaaggcgatgcaggcatccctggacttaacggaatc
cctggcgcatcaggtttcaaaggattcagaggggatgcaggtttcatgggaatgcctggg
aaagatggactgccaggtgatccaggtttccctgggccaaaaggcaaagcaggccctcca
ggttctcctgggctgcaaggagctacaggcgtaacccaaccaccagaagagatcagagtt
cctcctggcttaataggattgcctggaaataatggcaaccctggtttaaatggagaccct
ggcttccaggggcaaactggaccacaaggtccaaaaggaaaagcaggcatacctggccag
atgggatttaatggcttaccaggtccacctggtgtggtaggagacccaggttccccagga
actccagggctaccagggtttgaaggacgtcctgggaatccaggcctggctggattgccc
gggatgccaggtcgtagcattggggttggctataccttggtgaaacatagccagtcggag
cagatcccaccctgtccggtgggcatgaacaaactctgggaaggctacagtttgctgtat
gtggagggccaggagaagtcccacaatcaagacctgggtttcgctggctcctgcctgcct
cgcttcagcaccatgccttttatttattgcaacattgacgaagtgtgctactacgccagc
cgcaatgataaatcgtactggctttccaccaccgctccgatacccatgatgcccgtcagc
agctaccaaatcgcccagtacatcagtcgctgctcggtgtgcgaagcaccatcccaagct
gtggctgtgcacagccaggacatcaccattccacaatgtcccgaaggctggcggagtctc
tggattggctactccttcctcatgcacacggctcccgaaggcggtggccagtccctggtc
tctcccggatcctgcctagaggacttccgcgccacgcctttcattgagtgcaacggtgcc
cggggaacgtgccattacttttccaacaagtacagcttttggctgaccacggtggaggtg
aaccatcagtttgctgagtctcccgtctccgaaacgctgaaggcgggtcagctccggaca
cgggtgggacggtgccaagtctgcatgaaaaatttgtag
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integrated database retrieval system
