Notechis scutatus (mainland tiger snake): 113416731
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Entry
113416731 CDS
T09026
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked
KO
K16498
protocadherin delta 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
113416731 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nss01009
]
113416731 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nss04515
]
113416731 (PCDH11X)
Protein phosphatases and associated proteins [BR:
nss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113416731 (PCDH11X)
Cell adhesion molecules [BR:
nss04515
]
Cadherins
Protocadherins
113416731 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
Fibulin_C
TMEM154
Cadherin_4
Big_9
Ion_trans_2
DUF6249
Motif
Other DBs
NCBI-GeneID:
113416731
NCBI-ProteinID:
XP_026530553
UniProt:
A0A6J1UPZ0
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MDLLSGTYLLAVLLVCVVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAVDPDIGVNGIQHYELLK
PKTAPKRTFGSITNEQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GNPPRSSTAILQVTITDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSSQISSLAKRLFAIDNITGLITVKEPLDREESPVHKLTILASDGSSTPSRATVTVN
VTDINDNIPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATYLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQSVIGLSIPENNAPGTQLTKISATDADSGHNAEISYMLGLDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQANATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAIVTLSILNGKDNFIIDPITGVIRPNITFDREQQGSYTFQVK
AVDGGRLPRTSTAKVTINVVDVNDNRPVFVIPSTNYSYDLVPMSASPGSMVTKVFAVDND
TGMNAELRYSIIGGNSRGLFMIDQLTGNVTLKEKVISADHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNGSYIQELVRRNMETPVGQNVGDGDITPQTNDYIKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKSKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSATPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKAPGS
VHTRQHSKDVGRPQTPLKETSLESWTQPPSQRRVTFHLPDGSQESCSDSGLGDHEPSSNT
SMTHPLPLGFPQEEYYEQTSPNSRTEGDGNSDPESTIEVNLQKALTEASETCTQECLILG
HSDNCWMPPSLTQYQQSNPPLPAFGFQQGWVRGAISEGRHTLGRAGSKEDTEKGQGGPKP
QFYNACDRLCTSDDPVKLIPLANFIPPAQAGSGIPLIHEHQL
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctttctgggacttacctcttggcagtcttactggtctgcgtcgtgtttcag
tcgggcgctcaggagaagaattacaccgtgagggaggagttaccggaaaatgtccttatt
ggcaatttgctgaaggatctcaacctgacccttgaccccgatgtgcccctttcatccccg
cttcagttcaagctcgtgtacaagactggtgatgtccccctcgtccgcgtggaggaaaat
accggagaaatattcaccacggccaaccgcatcgatcgggaaaagctttgctctggcatt
tttagtgagaaccgttgtttttatgaggtggaagttgcagttcttcctgatgaggtcttc
aggctggtcaagattcgattcctgattgaggatataaatgataatgctcctcttttcccc
tccacggtcatcaatatctccatccctgagaacaccgcgatcaattcccgctattctgtc
ccgtcagctgttgatcctgacattggagtgaatggcattcaacattatgaactccttaag
cccaaaacagctccgaaaaggacttttggatccattacaaatgaacagggtcaaaatgta
tttggacttgatatcattgaaacacctgaaggagacaagtggccccagttgatagtgcaa
caaatccttgacagggagcagaaggacacctatgtgatgaagattaaagtggaggatggt
ggaaaccctccgagatccagcacggccattctccaagtcaccatcactgatgtgaatgac
aaccgtccggtcttcaaggagaatgatatcgaagtcagcgttcctgaaaatgcacctgtg
ggcacctccgtttctcaacttcatgccaccgatgccgacttgggatccaatgcccagatt
cacttttattttagtagccagatctctagtttggccaaaagactgtttgccatcgataac
atcactggtcttatcactgtcaaggagcccttggaccgggaggaatccccagtacacaaa
ttaaccattttggcgagtgacggcagttccactccttccagagctaccgtaacagtgaat
gtcacagacattaatgataacattccctcaatagacacaaggtatattatcaatccagtg
aatgggactgtgttactgtccgagaaagcaccactcaatactaagattgccctgattact
gtgatggataaggatgcggaccttaatggcaaagttacttgcttcacagaccacgatgtc
ccgttcaggttaaagccggtatttgataatcagtttctcctggaaacagccacctactta
gactacgaggccaccagagaatatgccatcaaaatagtggcttcggattcaggaaagcca
cccttgaaccaatctgcgatgctgctgatcaaaatcaaagatgaaaatgacaatgccccg
gtgttcacgcaatccgtgattgggctctccatccctgagaataacgctcctggaacccag
ctgaccaagataagtgctaccgatgctgacagcggccacaatgctgaaatcagttacatg
ctgggattggatgctcccccgattttcaacctggatcgccgtacaggcattctgacagcc
gtgaggaagttggatcgagaaaaacaagatcgctattcattcacggtgctggctaaagat
aatggcatgccacctttgcaagccaatgctactgtgactgtttctgttttggatcaaaat
gacaacagccctgctttcacacacaacgaatacaacttctatgtgccagaaaatcttccc
atgtatggcaccgttggactaatcactgtgacagatgcagactctggagaaaatgcaata
gtgaccttgtcgatattaaatggcaaagataatttcattattgatcctatcactggagtc
ataaggccgaatattacttttgacagggaacagcaaggatcttatacatttcaggtgaaa
gcagtggatgggggcaggctcccacgcacctccacggctaaagttactatcaatgttgtc
gatgtgaatgacaacaggcctgtttttgtcattccttccaccaactattcctacgacttg
gttccgatgtctgccagtccaggctccatggtgacaaaagtgtttgctgtggacaatgat
acagggatgaacgctgagctgcgttatagcattattggtgggaattcgcgaggattgttt
atgatcgatcagttaacgggcaacgtcactttgaaggagaaagtcatctcagcagatcat
ggattgcacagattggtaataaaagtcaatgatttagggcagcctgaatctttatatacc
atagcattagtgcacttatttgtgaatgaaaccgtcaccaatggatcctacatccaagag
ttggtccgccgcaacatggaaacacctgttggccaaaatgtcggggatggagacattacc
ccacaaaccaatgactacatcaaaatcatcattgccatcatcgcaggcaccatgacagtg
atactggtcatttttgtgacagccctggtacgttgtcgccaaactcctaggcacaaagtg
gtgcagaaaagcaagcagagtggtgagtgggtttctccaaaccaagaaaaccgtcagatc
aagaagaagaagaaaaagaagaagcggtctcccaaaagtcttctcctaaactttgtgact
attgaagaatctaagcctgatgatcccggccatgaacacatcaatggcaccttggacatt
cctgtagagctagaagaacagactatgggaaaatataactgggccaccacacccaccact
tttaaacctgacagtccagatttagcaaagcactacaagtctgccactccgcagcccaca
tttcagattaaacctgagactccagtaccaccgaagaaacaccatgtcatacaggaactt
cctctggataacacatttgtggtgggttgtgattccctctccaagtgttcttccagtagc
tcggacccatacagtgtatctgaatgcagctgtcaaggagggtttaaagctcctggctcc
gttcacaccagacagcattcaaaagatgtgggaagacctcagaccccactaaaagagaca
agtctagagtcatggacccaaccaccgtcccagcgccgagttacatttcatctccccgat
gggtctcaagaaagctgcagtgacagtgggctgggagaccacgagcccagcagtaacacc
agtatgacccaccctttgccactgggtttccctcaagaggagtactatgagcagacctca
cccaacagtcggacagagggagatggaaactcagatccggagtccactattgaggtgaac
ctccaaaaagctctcacggaagcttccgaaacctgcacgcaggaatgcctcatccttggc
cattctgacaattgctggatgcctccttcattgacacaataccagcaatccaatccacct
ttgccagcctttggcttccagcaggggtgggtgcgaggagccatctcggaaggaagacac
acccttggacgggccggttccaaggaggatacagagaaaggccaagggggacctaagcct
cagttctacaatgcctgtgacagactctgcaccagtgacgacccagtcaaactgatcccc
ctggcaaacttcatacctcctgcccaggctggaagcggcatccctttgatccatgagcac
cagctataa
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integrated database retrieval system
