Notechis scutatus (mainland tiger snake): 113416734
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Entry
113416734 CDS
T09026
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03013
Nucleocytoplasmic transport
nss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113416734 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
113416734 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113416734 (THOC2)
03041 Spliceosome [BR:
nss03041
]
113416734 (THOC2)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113416734 (THOC2)
Spliceosome [BR:
nss03041
]
Complex C
Other components
EJC/TREX
113416734 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113416734 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
113416734
NCBI-ProteinID:
XP_026530562
Ensembl:
ENSNSUG00000009069
UniProt:
A0A6J1UI33
LinkDB
All DBs
Position
Unknown
AA seq
1599 aa
AA seq
DB search
MAAAMMATSVAAALPAEWIRNWEKSGKSEFLQLCRALSENATFRGVQQALYELAYHVVKG
NLKHDQASNVLNDIIEFRDDMPSILADVFCILDIETSCLEEKNKRDQFMQLVLACLNLVS
DTILKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAEL
GQDLSGNITSELILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDEFFVPLIESYMYMC
EPQTLCHILGFKFKFYQEPNGETPVSLYRVAAILLQHNLIDLEDLYVHLLPSDHTILEEH
KWEIGEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKMEKPPDNQKLGLLEAMLKIGDWQ
HAQSIMDQMPPFYATSHKPIALALCQLLHVMIEPLYRRVGVLKGAKGAPIPPLQNKRAPK
PAEHFEDLRKEVFNMLCYLGPHLSHDPILFAKVLRLGKAFMKEYQLDGNKQEDREKMEIL
FSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLV
KVKAQIIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVD
SLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAG
LLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQI
RNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQ
FGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKG
NKQQQKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPRGSY
EREVNKLKIQMKAIDDNQDMPPNKKKKEKERCTALQDKLLEEEKKQLDHVERVLQRLKLE
KDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDR
VFSDIIYTVASCTENEASRYGRFLCCMLDTVTQWHSDKSVYEKECGNYPGFITVLRSSGY
DAVNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVVN
LGQALERRVRKIYEEEKEKRPDLYALAMGYSGQLKSRKMVPENDFHQKDLPTRNAVPTMV
QNGPGGAGLPPLTINAAKLEESTAEETDKLKEKSQGAVKVVNKAVNATPKVIASNGNTSK
LVKDKEDKEKCGKEKEKEKKDKIPAGTPEAKLLGKDGKDKPKEERANKEEKAREPKEKTP
KVDKEKEKIKREEKPSSKEEKSKNIVTNAESKSMAEKEREKEPSREREVTKEMKSKEVIR
GGGGGGGEKVPLAGSLKSPVPRSETSDTEREQKRRKIDTHSSPSHSSSVKDNFSELKDSA
VKHYVNHSAPALSKSKEREVDKKDLDKSRERSREREKKDEKEKKDRKRDHSNNDREVPQD
STKRRKEENGTTGSSKHSKSESPSDSPPRSNEKEKEKNKSKSSSKEKGDSIKVEKMEKSS
SGSKKESRHDKEKTEKKEKRDSTGNKEEKKHHKSSDKHR
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgatgatggcgacctccgtggcggcggcgctcccggccgaatggatccgc
aactgggagaaatccggcaagagcgagttcttgcagctgtgccgcgctctttcggaaaat
gcaacttttagaggtgtccaacaggctctctatgagcttgcgtatcacgttgtcaaagga
aatctaaagcatgaccaagcatcaaatgttcttaatgatattatagaatttcgggatgat
atgccttccattctggctgatgtattctgcatattagatatcgaaaccagttgtttagaa
gaaaagaacaaaagagaccagttcatgcagttggtgttggcttgcttgaacctggtttcc
gatactatattgaaagagcgtctggacccagaaactctggaatcattagggcttatcaag
cagtcccagcagtttaatcagaaatctgtgaaaataaagacaaaacttttttataagcaa
cagaaatttaatttattaagagaagagaatgaaggctatgcaaaactgattgctgaactg
ggacaagatttatctggaaatatcactagtgaattgatcctagaaaatattaaatcttta
ataggatgttttaacctggatcctaaccgagtgttggatattatcttggaagtctatgaa
tgtcgaccagaatacgatgaattttttgtacctttgatagagtcgtatatgtatatgtgt
gaacctcaaacactctgccatatacttggattcaaattcaagttttatcaggaaccaaat
ggagagactccagtttctttgtatagagtcgctgcaattcttttgcaacataacttaata
gatctggaagatctttatgtgcacctcctgccatccgaccacactatcctcgaagaacac
aaatgggaaatcggggaggcgaagcaaattgtaaggaaacttaccatggttgtgctctct
tccgaaaagacggaagagaaagagaaagaaaaggagaaggaagaggagaaaatggaaaag
ccaccagataaccagaaactgggtttattagaagccatgttaaaaatcggcgattggcag
catgcgcagagcattatggaccagatgcctccattttacgccacttcacacaaacccatc
gctctcgctctttgccagcttctccacgtgatgattgagcctctctatcgaagagtcggc
gtcctcaaaggtgccaaaggagcccctatccccccgttgcaaaacaagagagccccaaag
ccagcagaacattttgaagacttaaggaaagaagtgttcaacatgctttgctatctcggc
ccgcatctctcccacgatcccattctcttcgcaaaagttttgcgtcttgggaaagccttt
atgaaagagtaccagttggacggaaacaaacaagaggaccgagagaaaatggagatatta
ttcagctgcttgctgagtatcactgaccaggtcctgcttccttctctttccctgatggac
tgtaacgcgtgcatgtctgaggaactctgggggatgtttaaaacatttccataccagcac
cggtatcgtctctacggccagtggaagaacgaaacatacaatagccatccgctgctagta
aaagttaaagctcagataatcgacagagccaaatatataatgaagcgtttaacgaaggag
aacgtaaagccttctggaagacaaattgggaaactgagtcacagcaacccaaccatttta
tttgactatattttgtcccagatccagaaatacgataacttaataactccagttgttgat
tccttgaaatacctcacttcactaaactacgatgttttggcttattgcataattgaagct
ttggcaaatcccgagaaggagaggatgaagcatgatgacactacaatctccagttggctt
cagagcttggcaagtttttgtggtgctgtttttcgaaaatacccaatagaacttgcagga
ctcctccagtatgtggcaaatcaactcaaggctgggaaaagttttgacctcctcattttg
aaagaagtggtacaaaaaatggccggaattgaaatcaccgaagaaatgaccatggaacag
ttagaagccatgactggcggggagcagctgaaggcagagggaggctattttggtcagatc
aggaacacgaagaaatcttctcagagattaaaagacgcccttctggaccacgatctcgct
ctcccgctgtgccttctcatggctcagcagcgcaacggcgtcatcttccaagaaggaggg
gagaaacacttgaagctggtggggaagctgtacgatcagtgccacgatactttggtccag
tttggtggatttctggcatccaatttgagcacagaggactatattaagcgagtgccttct
atcgacgtcctctgtaacgaatttcacactcctcacgacgctgctttctttctttcaaga
cctatgtacgcacatcacatttcgtcgaagtacgatgagttgaagaaagcggaaaagggg
aataagcagcagcagaaagtccacaaatacatcacgtcctgcgaactggtgatggcgccc
gttcatgacgcggtcatctccttgcaccttccgaaggtctgggatgatatcagtccccag
ttctatgccaccttctggtccctgaccatgtatgacctggcggtgccccggggtagctat
gaacgggaagtcaacaaactcaaaatccagatgaaagccatcgacgacaatcaagacatg
cctcccaataaaaagaagaaagaaaaagaacgctgtacagcccttcaggataaacttctc
gaagaggaaaagaagcaattggatcacgtggaaagggtgttgcaaaggctgaagcttgaa
aaggacaactggctccttgcgaagtcgacgaaaaacgagaccataaccaagtttctgcag
ctgtgcatatttcctcgctgtatcttctctgccatcgatgctgtttactgtgctcgcttt
gtggaactggtgcatcagcagaaaacacccaatttctccacgttgctttgttatgacaga
gtgttctccgatatcatctacacagtagccagctgcaccgaaaatgaagccagtcgatat
ggtagatttttgtgctgcatgctagataccgtaacccagtggcacagcgacaaaagcgta
tacgaaaaggaatgtggtaactatcctggcttcatcacagtactgcgatccagtggttac
gacgctgtgaacaaagccgaccagttagactacgaaaatttccgacacgtagtacacaaa
tggcattataagttaaccaaggcgtctgtacactgtctggaaaccggggaatatacacat
atcagaaatatcctgatcgtgctgaccaaaattttgccatggtatccaaaggtggtgaat
ctgggccaggccttggaaagaagagtccgtaagatttacgaggaagagaaagaaaagaga
ccagacctatatgcattagccatgggctattctggccaactgaaaagtagaaaaatggtc
cctgaaaacgatttccatcagaaggaccttcccacccggaacgcagtgcccacaatggtg
caaaacgggcctgggggagcagggctgcctccgctcacaatcaacgcagctaaattggaa
gaaagcaccgccgaggagacagataagttgaaggaaaagtctcagggtgcagttaaagtg
gtcaacaaagccgtcaacgcgacgcccaaggtgattgccagcaatggaaacaccagcaag
cttgtcaaagacaaagaggacaaagagaaatgcgggaaggagaaagagaaggaaaagaaa
gataaaatcccagctggcactcctgaagctaaattgcttggcaaagacgggaaggataag
ccaaaagaagagagggcgaacaaagaagagaaggccagagaacccaaggagaagaccccg
aaggttgacaaagagaaggagaaaatcaagcgagaggaaaagccatcatccaaagaggaa
aaatccaagaatattgtgaccaacgccgagtccaaatcaatggcggaaaaggagagagag
aaggagccatcgagagagagagaagtaaccaaggagatgaaatccaaggaagtcattaga
ggaggcggaggaggcggaggagagaaggttccacttgctgggtccttgaagtcacctgtt
ccccgatccgaaacttcagatactgaaagggaacaaaaacgccgcaaaatagatacccat
tcttctccatcacattcctcaagtgtaaaggacaacttcagcgaactcaaggattccgca
gttaagcactacgttaaccactctgctccagcgttgtccaaaagtaaggagagagaagta
gacaagaaagatttggacaaatcaagggaaagatcccgagagagagaaaagaaagacgaa
aaggaaaagaaagaccgaaaaagggatcattcgaacaatgaccgcgaagtcccccaagat
tcaaccaagcgtcggaaagaggaaaacggaacaactggttcctccaaacatagtaagagt
gaaagtccttccgactctccccctcgttcaaatgagaaggagaaagagaagaacaagtca
aagtcttcaagcaaggagaaaggtgattccatcaaagtggaaaagatggagaaaagctct
tctggaagcaaaaaggaatccaggcacgataaagaaaaaacagagaagaaagaaaaacgg
gatagtactgggaacaaagaagaaaaaaaacaccataaatcttcagacaaacacagataa
DBGET
integrated database retrieval system
