Notechis scutatus (mainland tiger snake): 113417005
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Entry
113417005 CDS
T09026
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nss03041
]
113417005 (DDX20)
Enzymes [BR:
nss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113417005 (DDX20)
Spliceosome [BR:
nss03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
113417005 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SiaC
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
113417005
NCBI-ProteinID:
XP_026530964
Ensembl:
ENSNSUG00000013890
UniProt:
A0A6J1UTJ2
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MDAPDPVPSMGESWLRTRDVLLQEGPEDFRSLLLSAPVLEGLKAAGFLRPSPVQLKAIPL
GRCGLDLIVQAKSGTGKTCVFSTIALDSLILENSVTQILVLAPTREIAVQIHAVITTIGI
KMEGLECHVFIGGTPVNQDKMRLKKCHIAVGSPGRIKQLIDLDYLNTSSIRLFILDEADK
LLEEGSFQEQVNWIYSSLPANKQMLAVSATYPESLANTLAKYMREPTFVKLNSTDPSLLG
LKQYYKVVNSYPLPHKTFEEKAEHLQELFRKIPFNQALVFSNLHSRAQHLADILSSKGFP
AECISGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMH
RIGRAGRFGTLGLAVTYCCRGEEENMMMKIAQKCNLQLLSLPEILPPELLEHFEGGHVEV
TAVPYPNASPHTCLLPAKRPEGTSQPPTISASTETIVSDNSPVAKPKQVFKQKKLLKNRT
EHAKKIMNRNKHDNISLEKYQLESDCETAVHNNEKVDKESLKNMLPKIPCLSSFKNQDSV
CIWSMVDFIEDYEYFIKEGLERDVEIIRTYVNPRNQDKQLDSLDSVGTESSKYVEATIGI
LAGESDDDSSSCSSESSICSQENQSCIKTSSDMQQRENNILSTDQIHPQQFSPALKQKQE
TILVQKKTKGNVKQSKQIKRDQYHIHSIKTELTGEASQSKNAPFPHNENLSPDEYWRGYY
RAWRKHYIEASRLYYQKYQRPLNMLTAYHANAIYLEELLKKDR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgccggaccctgtgccttcgatgggggagtcgtggctgcgtacccgggatgtc
cttctccaggaagggcccgaagatttcaggtcgctgcttctttcagccccggttctggaa
gggctgaaagcggctggcttcctaaggccttctccggtgcagctcaaagctattccgcta
ggccgttgcggtttagaccttattgtgcaagcaaaatcaggcacaggtaaaacctgtgtg
ttttctactatcgcacttgactcccttatcttggaaaactcagtgactcagattctagtc
ttggcacctacccgagagattgctgtgcagatacatgcagtaattacaactattgggatc
aaaatggaaggtttggaatgtcatgtcttcattggaggaactcctgtaaatcaagataaa
atgagacttaaaaagtgtcatatagctgtaggctcccccggtcgcattaaacaacttata
gatctggactatttgaatacatccagcattcgtcttttcatccttgatgaagcagacaag
cttctggaagaaggcagcttccaggaacaagtaaattggatttattcttctctaccagcc
aataagcagatgttggcagtttcagccacctatcctgaatccttagctaatactttggct
aaatacatgagagaacccacatttgtgaagctgaattctactgatccaagtctccttgga
ttgaagcagtactacaaagtagtgaattcttacccattacctcataagacctttgaggag
aaagctgagcatttacaggagctcttcaggaaaataccgttcaaccaggccttggttttc
tcaaatctacatagccgagctcaacacttggctgatatattgtcatccaaaggttttcct
gctgagtgtatttcaggcagtatgaatcagaatcagcgacttgatgctatggctaagctg
aagcagtttcattgcagagtgttaatttcaacagatttgacttcccgtggaattgatgct
gagaaggtgaatctggttgttaacttagatgtgcctttggattgggaaacatatatgcat
cggattggtagagctggacgctttggaactttaggattagctgtgacatactgttgtcgt
ggagaggaagaaaatatgatgatgaaaattgcacaaaaatgtaatcttcagcttctttcc
ttaccagaaattttgccaccagagctattggaacattttgaaggagggcatgtagaagtc
actgctgtgccatatcccaatgcatctcctcatacatgtttgttgccagctaaaaggcca
gaagggacaagccaacccccaacaataagtgccagcacagagactattgtttctgacaat
tctccagtagccaagccaaaacaagttttcaaacaaaagaagcttcttaaaaatagaaca
gagcatgctaaaaaaataatgaatagaaataaacatgacaatatctcattggaaaaatac
caattggaatctgattgtgaaactgctgtgcataataacgaaaaggtagacaaagaaagt
ttaaagaacatgcttcctaaaatcccgtgcctgtcttcttttaagaatcaggattctgtc
tgcatatggagcatggttgattttattgaggattatgaatatttcattaaggaaggactg
gagagagatgtagagattataagaacttacgtaaatcccagaaaccaagataaacagtta
gattctttagattcagtaggaacggaatccagtaagtatgtggaagcaacaattgggata
ttggctggggaatctgatgatgatagtagttcttgcagttctgaatcatccatatgtagc
caagagaatcaatcctgcatcaagacctcttcagatatgcagcaaagagagaataatata
ctgtcaacagaccagatacatcctcagcagttcagtcctgcccttaaacaaaagcaagag
actattttggtccaaaagaagacgaaagggaatgtgaaacagagtaaacagatcaagcgt
gaccaatatcacattcactccatcaagactgaacttacaggagaggcatcccaaagcaaa
aatgctccttttcctcacaatgagaatttaagtcctgatgaatactggagaggatattac
cgggcatggcggaagcattatattgaagcgtctcgtttatactaccaaaaataccagaga
ccattaaacatgctgactgcatatcatgccaatgcaatctacctggaagagctgttgaag
aaagatagataa
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